r-depmixs4
|
1.5.0-4 |
0 |
0.00
|
Dependent Mixture Models - Hidden Markov Models of GLMs and Other Distributions in S4 |
BioArchLinuxBot
|
2022-06-05 23:57 (UTC) |
r-deprecated-215
|
215-3 |
2 |
0.00
|
Language and environment for statistical computing and graphics - deprecated version (2.15.3) |
daroczig
|
2015-06-22 04:29 (UTC) |
r-deqms
|
1.22.0-1 |
0 |
0.00
|
a tool to perform statistical analysis of differential protein expression for quantitative proteomics data. |
BioArchLinuxBot
|
2024-05-01 20:20 (UTC) |
r-derfinder
|
1.38.0-1 |
0 |
0.00
|
Annotation-agnostic differential expression analysis of RNA-seq data at base-pair resolution via the DER Finder approach |
BioArchLinuxBot
|
2024-05-03 08:18 (UTC) |
r-derfinderhelper
|
1.38.0-1 |
0 |
0.00
|
derfinder helper package |
BioArchLinuxBot
|
2024-05-01 22:01 (UTC) |
r-derfinderplot
|
1.38.0-1 |
0 |
0.00
|
Plotting functions for derfinder |
BioArchLinuxBot
|
2024-05-03 13:28 (UTC) |
r-deriv
|
4.1.3-9 |
0 |
0.00
|
Symbolic Differentiation |
BioArchLinuxBot
|
2024-02-09 20:06 (UTC) |
r-desc
|
1.4.3-1 |
3 |
0.00
|
Manipulate DESCRIPTION Files |
greyltc
|
2023-12-11 12:36 (UTC) |
r-descan2
|
1.24.0-1 |
0 |
0.00
|
Differential Enrichment Scan 2 |
BioArchLinuxBot
|
2024-05-03 12:33 (UTC) |
r-desctools
|
0.99.54-1 |
1 |
0.00
|
Tools for Descriptive Statistics |
BioArchLinuxBot
|
2024-02-04 00:07 (UTC) |
r-deseq2
|
1.42.0-2 |
2 |
0.00
|
Differential gene expression analysis based on the negative binomial distribution. |
vejnar
|
2023-11-26 17:42 (UTC) |
r-desingle
|
1.24.0-1 |
0 |
0.00
|
DEsingle for detecting three types of differential expression in single-cell RNA-seq data |
BioArchLinuxBot
|
2024-05-01 19:48 (UTC) |
r-desirability
|
2.1-8 |
0 |
0.00
|
Function Optimization and Ranking via Desirability Functions |
BioArchLinuxBot
|
2024-03-08 00:17 (UTC) |
r-desolve
|
1.40-2 |
1 |
0.00
|
Solvers for Initial Value Problems of Differential Equations ('ODE', 'DAE', 'DDE') |
BioArchLinuxBot
|
2024-04-24 19:30 (UTC) |
r-despace
|
1.4.0-1 |
0 |
0.00
|
a framework to discover spatially variable genes |
pekkarr
|
2024-05-03 09:04 (UTC) |
r-destiny
|
3.18.0-1 |
0 |
0.00
|
Creates diffusion maps |
BioArchLinuxBot
|
2024-05-02 21:33 (UTC) |
r-desubs
|
1.30.0-1 |
0 |
0.00
|
DEsubs: an R package for flexible identification of differentially expressed subpathways using RNA-seq expression experiments |
BioArchLinuxBot
|
2024-05-02 22:13 (UTC) |
r-detectseparation
|
0.3-3 |
0 |
0.00
|
Detect and Check for Separation and Infinite Maximum Likelihood Estimates |
BioArchLinuxBot
|
2022-11-26 14:34 (UTC) |
r-devel-svn
|
r78409-1 |
8 |
0.00
|
Language and environment for statistical computing and graphics - development version (SVN) |
daroczig
|
2020-05-11 14:06 (UTC) |
r-devtools
|
2.4.5-5 |
1 |
0.00
|
Tools to Make Developing R Packages Easier |
BioArchLinuxBot
|
2022-11-26 15:45 (UTC) |
r-dewseq
|
1.18.0-1 |
0 |
0.00
|
Differential Expressed Windows Based on Negative Binomial Distribution |
BioArchLinuxBot
|
2024-05-02 22:08 (UTC) |
r-dexma
|
1.12.0-1 |
0 |
0.00
|
Differential Expression Meta-Analysis |
BioArchLinuxBot
|
2024-05-02 02:42 (UTC) |
r-dexmadata
|
1.12.0-1 |
0 |
0.00
|
Data package for DExMA package |
BioArchLinuxBot
|
2024-05-04 00:42 (UTC) |
r-dexseq
|
1.50.0-1 |
0 |
0.00
|
Inference of differential exon usage in RNA-Seq |
BioArchLinuxBot
|
2024-05-03 13:01 (UTC) |
r-dfidx
|
0.0.5-3 |
0 |
0.00
|
Indexed Data Frames |
pekkarr
|
2024-04-25 11:18 (UTC) |
r-dfp
|
1.62.0-1 |
0 |
0.00
|
Gene Selection |
BioArchLinuxBot
|
2024-05-02 12:42 (UTC) |
r-dgeobj
|
1.1.2-3 |
0 |
0.00
|
Differential Gene Expression (DGE) Analysis Results Data Object |
pekkarr
|
2024-04-26 16:04 (UTC) |
r-dgeobj.utils
|
1.0.6-3 |
0 |
0.00
|
Differential Gene Expression (DGE) Analysis Utility Toolkit |
pekkarr
|
2024-04-30 12:19 (UTC) |
r-dgof
|
1.4-6 |
0 |
0.00
|
Discrete Goodness-of-Fit Tests |
BioArchLinuxBot
|
2024-03-15 14:20 (UTC) |
r-dharma
|
0.4.6-1 |
0 |
0.00
|
Residual Diagnostics for Hierarchical (Multi-Level / Mixed) Regression Models |
pekkarr
|
2024-03-23 11:29 (UTC) |
r-diagram
|
1.6.5-7 |
0 |
0.00
|
Functions for Visualising Simple Graphs (Networks), Plotting Flow Diagrams |
BioArchLinuxBot
|
2024-04-12 12:06 (UTC) |
r-diagrammer
|
1.0.11-1 |
0 |
0.00
|
Graph/Network Visualization |
BioArchLinuxBot
|
2024-02-03 00:04 (UTC) |
r-diagrammersvg
|
0.1-2 |
0 |
0.00
|
Export DiagrammeR Graphviz Graphs as SVG |
dringsim
|
2023-08-22 03:00 (UTC) |
r-dialignr
|
2.12.0-1 |
0 |
0.00
|
Dynamic Programming Based Alignment of MS2 Chromatograms |
BioArchLinuxBot
|
2024-05-01 22:44 (UTC) |
r-dials
|
1.2.1-1 |
0 |
0.00
|
Tools for Creating Tuning Parameter Values |
pekkarr
|
2024-02-22 18:09 (UTC) |
r-dicedesign
|
1.10-2 |
0 |
0.00
|
Designs of Computer Experiments |
pekkarr
|
2024-04-24 19:28 (UTC) |
r-dicekriging
|
1.6.0-1 |
0 |
0.00
|
Kriging Methods for Computer Experiments |
orphan
|
2022-01-18 19:08 (UTC) |
r-dicer
|
2.2.0-3 |
0 |
0.00
|
Diverse Cluster Ensemble in R |
pekkarr
|
2024-02-24 00:07 (UTC) |
r-dichromat
|
2.0.0.1-9 |
0 |
0.00
|
Color Schemes for Dichromats |
BioArchLinuxBot
|
2024-04-24 19:21 (UTC) |
r-diffbind
|
3.14.0-1 |
0 |
0.00
|
Differential Binding Analysis of ChIP-Seq Peak Data |
BioArchLinuxBot
|
2024-05-03 09:19 (UTC) |
r-diffcoexp
|
1.24.0-1 |
0 |
0.00
|
Differential Co-expression Analysis |
BioArchLinuxBot
|
2024-05-02 20:55 (UTC) |
r-diffcorr
|
0.4.3-1 |
0 |
0.00
|
Analyzing and Visualizing Differential Correlation Networks in Biological Data |
BioArchLinuxBot
|
2023-08-25 12:10 (UTC) |
r-diffcyt
|
1.24.0-1 |
0 |
0.00
|
Differential discovery in high-dimensional cytometry via high-resolution clustering |
BioArchLinuxBot
|
2024-05-02 20:28 (UTC) |
r-differentialregulation
|
2.2.0-1 |
0 |
0.00
|
Differentially regulated genes from scRNA-seq data |
pekkarr
|
2024-05-02 21:45 (UTC) |
r-diffgeneanalysis
|
1.86.0-1 |
0 |
0.00
|
Performs differential gene expression Analysis |
BioArchLinuxBot
|
2024-05-02 04:37 (UTC) |
r-diffhic
|
1.36.1-1 |
0 |
0.00
|
Differential Analyis of Hi-C Data |
BioArchLinuxBot
|
2024-05-14 01:11 (UTC) |
r-difflogo
|
2.28.0-1 |
0 |
0.00
|
DiffLogo: A comparative visualisation of biooligomer motifs |
BioArchLinuxBot
|
2024-05-01 18:10 (UTC) |
r-diffloop
|
1.24.0-4 |
0 |
0.00
|
Identifying differential DNA loops from chromatin topology data |
BioArchLinuxBot
|
2022-11-04 06:35 (UTC) |
r-diffobj
|
0.3.5-1 |
2 |
0.00
|
Diffs for R Objects |
greyltc
|
2022-01-13 18:10 (UTC) |
r-diffr
|
0.1-4 |
0 |
0.00
|
Display Differences Between Two Files using Codediff Library |
BioArchLinuxBot
|
2022-06-06 00:09 (UTC) |
r-diffusionmap
|
1.2.0-3 |
0 |
0.00
|
Diffusion Map |
pekkarr
|
2024-04-25 13:10 (UTC) |
r-diffustats
|
1.24.0-1 |
0 |
0.00
|
Diffusion scores on biological networks |
BioArchLinuxBot
|
2024-05-02 05:36 (UTC) |
r-diffutr
|
1.12.0-1 |
0 |
0.00
|
diffUTR: Streamlining differential exon and 3' UTR usage |
BioArchLinuxBot
|
2024-05-03 13:46 (UTC) |
r-diffviewer
|
0.1.2-1 |
0 |
0.00
|
HTML Widget to Show File Differences |
peippo
|
2024-06-16 09:14 (UTC) |
r-digest
|
0.6.35-1 |
4 |
0.00
|
Create Compact Hash Digests of R Objects |
BioArchLinuxBot
|
2024-03-11 18:17 (UTC) |
r-diggit
|
1.36.0-1 |
0 |
0.00
|
Inference of Genetic Variants Driving Cellular Phenotypes |
BioArchLinuxBot
|
2024-05-01 23:58 (UTC) |
r-digittests
|
0.1.2-4 |
0 |
0.00
|
Tests for Detecting Irregular Digit Patterns |
BioArchLinuxBot
|
2024-03-07 12:09 (UTC) |
r-dimred
|
0.2.6-5 |
0 |
0.00
|
A Framework for Dimensionality Reduction |
pekkarr
|
2024-04-26 01:01 (UTC) |
r-dino
|
1.10.0-1 |
0 |
0.00
|
Normalization of Single-Cell mRNA Sequencing Data |
BioArchLinuxBot
|
2024-05-03 01:36 (UTC) |
r-diptest
|
0.77.1-1 |
0 |
0.00
|
Hartigan's Dip Test Statistic for Unimodality - Corrected |
BioArchLinuxBot
|
2024-04-11 00:01 (UTC) |
r-dir.expiry
|
1.12.0-1 |
0 |
0.00
|
Managing Expiration for Cache Directories |
BioArchLinuxBot
|
2024-05-02 04:35 (UTC) |
r-directlabels
|
2024.1.21-4 |
0 |
0.00
|
Direct Labels for Multicolor Plots |
BioArchLinuxBot
|
2024-04-10 12:09 (UTC) |
r-director
|
1.30.0-1 |
0 |
0.00
|
A dynamic visualization tool of multi-level data |
BioArchLinuxBot
|
2024-05-01 19:57 (UTC) |
r-directpa
|
1.5.1-3 |
0 |
0.00
|
Direction Analysis for Pathways and Kinases |
pekkarr
|
2024-04-25 23:01 (UTC) |
r-dirichletmultinomial
|
1.46.0-1 |
0 |
0.00
|
Dirichlet-Multinomial Mixture Model Machine Learning for Microbiome Data |
BioArchLinuxBot
|
2024-05-01 22:01 (UTC) |
r-dirichletreg
|
0.7.1-4 |
0 |
0.00
|
Dirichlet Regression |
BioArchLinuxBot
|
2022-06-06 00:13 (UTC) |
r-dirmult
|
0.1.3.5-9 |
0 |
0.00
|
Estimation in Dirichlet-Multinomial Distribution |
BioArchLinuxBot
|
2024-04-24 21:41 (UTC) |
r-discordant
|
1.28.0-1 |
0 |
0.00
|
The Discordant Method: A Novel Approach for Differential Correlation |
BioArchLinuxBot
|
2024-05-01 20:08 (UTC) |
r-discorhythm
|
1.20.0-1 |
0 |
0.00
|
Interactive Workflow for Discovering Rhythmicity in Biological Data |
BioArchLinuxBot
|
2024-05-02 19:33 (UTC) |
r-discriminer
|
0.1.29-6 |
0 |
0.00
|
Tools of the Trade for Discriminant Analysis |
BioArchLinuxBot
|
2022-06-27 06:03 (UTC) |
r-distances
|
0.1.10-2 |
0 |
0.00
|
Tools for Distance Metrics |
BioArchLinuxBot
|
2024-03-07 12:09 (UTC) |
r-distillery
|
1.2.1-7 |
0 |
0.00
|
Method Functions for Confidence Intervals and to Distill Information from an Object |
BioArchLinuxBot
|
2024-02-29 00:03 (UTC) |
r-distinct
|
1.16.0-1 |
0 |
0.00
|
distinct: a method for differential analyses via hierarchical permutation tests |
BioArchLinuxBot
|
2024-05-03 01:48 (UTC) |
r-distr
|
2.9.3-1 |
0 |
0.00
|
Object Oriented Implementation of Distributions |
BioArchLinuxBot
|
2024-01-30 01:13 (UTC) |
r-distrex
|
2.9.2-1 |
0 |
0.00
|
Extensions of Package 'distr' |
BioArchLinuxBot
|
2024-01-30 12:02 (UTC) |
r-distributional
|
0.4.0-1 |
0 |
0.00
|
Vectorised Probability Distributions |
BioArchLinuxBot
|
2024-02-07 18:05 (UTC) |
r-distributions3
|
0.2.1-3 |
0 |
0.00
|
Probability Distributions as S3 Objects |
pekkarr
|
2024-04-25 13:03 (UTC) |
r-distributionutils
|
0.6.1-2 |
0 |
0.00
|
Distribution Utilities |
BioArchLinuxBot
|
2024-02-29 18:05 (UTC) |
r-distro
|
0.1.0-1 |
0 |
0.00
|
Linux Distribution Properties |
peippo
|
2023-03-22 10:28 (UTC) |
r-dittoseq
|
1.16.0-1 |
0 |
0.00
|
User Friendly Single-Cell and Bulk RNA Sequencing Visualization |
BioArchLinuxBot
|
2024-05-02 21:19 (UTC) |
r-divergence
|
1.20.0-1 |
0 |
0.00
|
Divergence: Functionality for assessing omics data by divergence with respect to a baseline |
BioArchLinuxBot
|
2024-05-02 19:34 (UTC) |
r-dixontest
|
1.0.4-4 |
0 |
0.00
|
Dixon's Ratio Test for Outlier Detection |
BioArchLinuxBot
|
2024-04-24 19:51 (UTC) |
r-dks
|
1.50.0-1 |
0 |
0.00
|
The double Kolmogorov-Smirnov package for evaluating multiple testing procedures. |
BioArchLinuxBot
|
2024-05-01 19:11 (UTC) |
r-dmcfb
|
1.18.0-1 |
0 |
0.00
|
Differentially Methylated Cytosines via a Bayesian Functional Approach |
BioArchLinuxBot
|
2024-05-03 01:07 (UTC) |
r-dmchmm
|
1.26.0-1 |
0 |
0.00
|
Differentially Methylated CpG using Hidden Markov Model |
BioArchLinuxBot
|
2024-05-03 01:10 (UTC) |
r-dml
|
1.1.0-4 |
0 |
0.00
|
Distance Metric Learning in R |
BioArchLinuxBot
|
2022-06-06 00:20 (UTC) |
r-dmrcaller
|
1.36.0-1 |
0 |
0.00
|
Differentially Methylated Regions caller |
BioArchLinuxBot
|
2024-05-01 22:17 (UTC) |
r-dmrcate
|
3.0.2-1 |
0 |
0.00
|
Methylation array and sequencing spatial analysis methods |
BioArchLinuxBot
|
2024-06-20 00:08 (UTC) |
r-dmrforpairs
|
1.35.0-2 |
0 |
0.00
|
identifying Differentially Methylated Regions between unique samples using array based methylation profiles |
BioArchLinuxBot
|
2024-02-11 18:14 (UTC) |
r-dmrscan
|
1.26.0-1 |
0 |
0.00
|
Detection of Differentially Methylated Regions |
BioArchLinuxBot
|
2024-05-01 22:19 (UTC) |
r-dmrseq
|
1.24.0-1 |
0 |
0.00
|
Detection and inference of differentially methylated regions from Whole Genome Bisulfite Sequencing |
BioArchLinuxBot
|
2024-05-03 05:32 (UTC) |
r-dmt
|
0.8.20-6 |
0 |
0.00
|
Dependency Modeling Toolkit |
BioArchLinuxBot
|
2022-06-27 06:05 (UTC) |
r-dmwr
|
0.4.1-4 |
0 |
0.00
|
Data Mining with R, learning with case studies |
BioArchLinuxBot
|
2022-06-06 00:23 (UTC) |
r-dmwr2
|
0.0.2-4 |
0 |
0.00
|
Functions and Data for the Second Edition of "Data Mining with R" |
BioArchLinuxBot
|
2022-06-06 00:23 (UTC) |
r-dnabarcodecompatibility
|
1.20.0-1 |
0 |
0.00
|
A Tool for Optimizing Combinations of DNA Barcodes Used in Multiplexed Experiments on Next Generation Sequencing Platforms |
BioArchLinuxBot
|
2024-05-01 20:10 (UTC) |
r-dnabarcodes
|
1.34.0-1 |
0 |
0.00
|
A tool for creating and analysing DNA barcodes used in Next Generation Sequencing multiplexing experiments |
BioArchLinuxBot
|
2024-05-02 04:44 (UTC) |
r-dnacopy
|
1.78.0-1 |
0 |
0.00
|
DNA Copy Number Data Analysis |
BioArchLinuxBot
|
2024-05-02 03:19 (UTC) |
r-dnafusion
|
1.6.0-1 |
0 |
0.00
|
Identification of gene fusions using paired-end sequencing |
pekkarr
|
2024-05-03 02:54 (UTC) |
r-dnashaper
|
1.32.0-1 |
0 |
0.00
|
High-throughput prediction of DNA shape features |
BioArchLinuxBot
|
2024-05-02 00:17 (UTC) |
r-dnet
|
1.1.7-7 |
0 |
0.00
|
Integrative Analysis of Omics Data in Terms of Network, Evolution and Ontology |
BioArchLinuxBot
|
2024-02-16 12:02 (UTC) |
r-do.db
|
2.9-4 |
0 |
0.00
|
A set of annotation maps describing the entire Disease Ontology |
BioArchLinuxBot
|
2022-06-06 00:26 (UTC) |
r-doby
|
4.6.21-1 |
0 |
0.00
|
Groupwise Statistics, LSmeans, Linear Estimates, Utilities |
BioArchLinuxBot
|
2024-04-30 00:01 (UTC) |
r-dockerfiler
|
0.2.2-2 |
0 |
0.00
|
Easy Dockerfile Creation from R |
BioArchLinuxBot
|
2024-05-01 12:01 (UTC) |
r-docopt
|
0.7.1-8 |
0 |
0.00
|
Command-Line Interface Specification Language |
dhn
|
2024-04-25 07:09 (UTC) |
r-doe.base
|
1.2.4-1 |
0 |
0.00
|
Full Factorials, Orthogonal Arrays and Base Utilities for DoE Packages |
BioArchLinuxBot
|
2023-11-15 00:04 (UTC) |
r-domc
|
1.3.8-3 |
0 |
0.00
|
Foreach Parallel Adaptor for 'parallel' |
pekkarr
|
2024-04-25 08:09 (UTC) |
r-dominoeffect
|
1.24.0-1 |
0 |
0.00
|
Identification and Annotation of Protein Hotspot Residues |
BioArchLinuxBot
|
2024-05-07 12:07 (UTC) |
r-doparallel
|
1.0.17-9 |
0 |
0.00
|
Foreach Parallel Adaptor for the 'parallel' Package |
pekkarr
|
2024-04-26 16:57 (UTC) |
r-doppelgangr
|
1.32.0-1 |
0 |
0.00
|
Identify likely duplicate samples from genomic or meta-data |
BioArchLinuxBot
|
2024-05-03 13:52 (UTC) |
r-dorng
|
1.8.6-3 |
0 |
0.00
|
Generic Reproducible Parallel Backend for 'foreach' Loops |
BioArchLinuxBot
|
2023-02-09 18:08 (UTC) |
r-dorothea
|
1.16.0-1 |
0 |
0.00
|
Collection Of Human And Mouse TF Regulons |
BioArchLinuxBot
|
2024-05-03 18:23 (UTC) |
r-doscheda
|
1.26.0-1 |
0 |
0.00
|
A DownStream Chemo-Proteomics Analysis Pipeline |
BioArchLinuxBot
|
2024-05-02 00:50 (UTC) |
r-dose
|
3.30.1-1 |
0 |
0.00
|
Disease Ontology Semantic and Enrichment analysis |
BioArchLinuxBot
|
2024-05-18 12:03 (UTC) |
r-doser
|
1.20.0-1 |
0 |
0.00
|
doseR |
BioArchLinuxBot
|
2024-05-02 19:52 (UTC) |
r-dosnow
|
1.0.20-4 |
0 |
0.00
|
Foreach Parallel Adaptor for the 'snow' Package |
BioArchLinuxBot
|
2022-06-06 00:30 (UTC) |
r-dotcall64
|
1.1.1-2 |
0 |
0.00
|
Enhanced Foreign Function Interface Supporting Long Vectors |
BioArchLinuxBot
|
2024-03-16 12:06 (UTC) |
r-doubletrouble
|
1.4.0-1 |
0 |
0.00
|
Identification and classification of duplicated genes |
pekkarr
|
2024-05-05 18:13 (UTC) |
r-downlit
|
0.4.4-1 |
0 |
0.00
|
Syntax Highlighting and Automatic Linking |
BioArchLinuxBot
|
2024-06-10 12:14 (UTC) |
r-downloader
|
0.4-4 |
0 |
0.00
|
Download Files over HTTP and HTTPS |
BioArchLinuxBot
|
2022-06-06 00:30 (UTC) |
r-dpeak
|
1.12.0-2 |
0 |
0.00
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dPeak (Deconvolution of Peaks in ChIP-seq Analysis) |
BioArchLinuxBot
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2024-02-12 18:04 (UTC) |
r-dplr
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1.7.7-1 |
0 |
0.00
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Dendrochronology Program Library in R |
BioArchLinuxBot
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2024-06-02 00:01 (UTC) |
r-dplyr
|
1.1.4-2 |
2 |
0.00
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A Grammar of Data Manipulation |
pekkarr
|
2024-03-17 12:27 (UTC) |
r-dqrng
|
0.4.1-1 |
0 |
0.00
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Fast Pseudo Random Number Generators |
BioArchLinuxBot
|
2024-05-29 00:02 (UTC) |
r-drawer
|
0.2.0.1-1 |
0 |
0.00
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An Interactive HTML Image Editing Tool |
BioArchLinuxBot
|
2022-08-20 05:33 (UTC) |
r-drawproteins
|
1.24.0-1 |
0 |
0.00
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Package to Draw Protein Schematics from Uniprot API output |
BioArchLinuxBot
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2024-05-01 20:22 (UTC) |
r-drawr
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1.0.3-3 |
0 |
0.00
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Discriminative Random Walk with Restart |
BioArchLinuxBot
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2022-06-06 00:33 (UTC) |
r-drc
|
3.0.1-3 |
0 |
0.00
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Analysis of Dose-Response Curves |
BioArchLinuxBot
|
2022-06-06 00:33 (UTC) |
r-dreamerr
|
1.4.0-2 |
0 |
0.00
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Error Handling Made Easy |
pekkarr
|
2024-04-25 04:59 (UTC) |
r-dreamlet
|
1.2.1-1 |
0 |
0.00
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Scalable differential expression analysis of single cell transcriptomics datasets with complex study designs |
pekkarr
|
2024-06-12 00:08 (UTC) |
r-drimpute
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1.0-4 |
0 |
0.00
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Imputing Dropout Events in Single-Cell RNA-Sequencing Data |
BioArchLinuxBot
|
2022-06-06 00:34 (UTC) |
r-drimseq
|
1.32.0-1 |
0 |
0.00
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Differential transcript usage and tuQTL analyses with Dirichlet-multinomial model in RNA-seq |
BioArchLinuxBot
|
2024-05-01 22:25 (UTC) |
r-drivernet
|
1.44.0-1 |
0 |
0.00
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uncovering somatic driver mutations modulating transcriptional networks in cancer |
BioArchLinuxBot
|
2024-05-02 04:21 (UTC) |
r-dropletutils
|
1.24.0-1 |
0 |
0.00
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Utilities for Handling Single-Cell Droplet Data |
BioArchLinuxBot
|
2024-05-03 00:07 (UTC) |
r-drr
|
0.0.4-3 |
0 |
0.00
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Dimensionality Reduction via Regression |
pekkarr
|
2024-04-25 03:42 (UTC) |
r-drtmle
|
1.1.2-1 |
0 |
0.00
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Doubly-Robust Nonparametric Estimation and Inference |
BioArchLinuxBot
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2023-01-06 00:03 (UTC) |
r-drugtargetinteractions
|
1.12.0-1 |
0 |
0.00
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Drug-Target Interactions |
BioArchLinuxBot
|
2024-05-03 04:16 (UTC) |
r-drugvsdisease
|
2.46.0-1 |
0 |
0.00
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Comparison of disease and drug profiles using Gene set Enrichment Analysis |
BioArchLinuxBot
|
2024-05-03 12:13 (UTC) |
r-drugvsdiseasedata
|
1.40.0-1 |
0 |
0.00
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Drug versus Disease Data |
BioArchLinuxBot
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2024-05-04 00:25 (UTC) |
r-dss
|
2.52.0-1 |
0 |
0.00
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Dispersion shrinkage for sequencing data |
BioArchLinuxBot
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2024-05-03 04:31 (UTC) |
r-dstruct
|
1.10.0-1 |
0 |
0.00
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Identifying differentially reactive regions from RNA structurome profiling data |
BioArchLinuxBot
|
2024-05-01 22:00 (UTC) |
r-dt
|
0.33-1 |
1 |
0.00
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A Wrapper of the JavaScript Library 'DataTables' |
BioArchLinuxBot
|
2024-04-04 06:04 (UTC) |
r-dta
|
2.50.0-1 |
0 |
0.00
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Dynamic Transcriptome Analysis |
BioArchLinuxBot
|
2024-05-02 04:40 (UTC) |
r-dtangle
|
2.0.9-7 |
0 |
0.00
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Cell Type Deconvolution from Gene Expressions |
BioArchLinuxBot
|
2024-04-12 12:09 (UTC) |
r-dtplyr
|
1.3.1-6 |
0 |
0.00
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Data Table Back-End for 'dplyr' |
pekkarr
|
2024-04-28 12:06 (UTC) |
r-dtt
|
0.1.2-9 |
2 |
0.00
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Discrete Trigonometric Transforms |
BioArchLinuxBot
|
2024-03-16 18:01 (UTC) |
r-dtw
|
1.23.1-3 |
0 |
0.00
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Dynamic Time Warping Algorithms |
BioArchLinuxBot
|
2024-04-10 18:04 (UTC) |
r-dualks
|
1.52.0-1 |
0 |
0.00
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Dual KS Discriminant Analysis and Classification |
BioArchLinuxBot
|
2022-06-07 13:13 (UTC) |
r-duckdb
|
1.0.0-1 |
0 |
0.00
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DBI Package for the DuckDB Database Management System |
pekkarr
|
2024-06-14 18:14 (UTC) |
r-dune
|
1.16.0-1 |
0 |
0.00
|
Improving replicability in single-cell RNA-Seq cell type discovery |
BioArchLinuxBot
|
2024-05-02 19:38 (UTC) |
r-dunn.test
|
1.3.6-1 |
0 |
0.00
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Dunn's Test of Multiple Comparisons Using Rank Sums |
BioArchLinuxBot
|
2024-04-13 00:01 (UTC) |
r-dupradar
|
1.34.0-1 |
0 |
0.00
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Assessment of duplication rates in RNA-Seq datasets |
BioArchLinuxBot
|
2024-05-02 05:14 (UTC) |
r-dyebias
|
1.64.0-1 |
0 |
0.00
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The GASSCO method for correcting for slide-dependent gene-specific dye bias |
BioArchLinuxBot
|
2024-05-01 22:51 (UTC) |
r-dygraphs
|
1.1.1.6-5 |
0 |
0.00
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Interface to 'Dygraphs' Interactive Time Series Charting Library |
BioArchLinuxBot
|
2022-06-06 00:41 (UTC) |
r-dynamictreecut
|
1.63.1-10 |
0 |
0.00
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Methods for Detection of Clusters in Hierarchical Clustering Dendrograms |
BioArchLinuxBot
|
2024-04-24 19:47 (UTC) |
r-dyndoc
|
1.82.0-1 |
0 |
0.00
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Dynamic document tools |
BioArchLinuxBot
|
2024-05-02 03:38 (UTC) |
r-e1071
|
1.7.14-1 |
3 |
0.00
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Functions for latent class analysis, short time Fourier transform, fuzzy clustering, support vector machines, shortest path computation, bagged clustering, naive Bayes classifier, ... |
editicalu
|
2023-12-18 17:19 (UTC) |
r-earth
|
5.3.3-1 |
0 |
0.00
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Multivariate Adaptive Regression Splines |
BioArchLinuxBot
|
2024-02-26 18:03 (UTC) |
r-easier
|
1.10.0-1 |
0 |
0.00
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Estimate Systems Immune Response from RNA-seq data |
BioArchLinuxBot
|
2024-05-03 18:53 (UTC) |
r-easierdata
|
1.10.0-1 |
0 |
0.00
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easier internal data and exemplary dataset from IMvigor210CoreBiologies package |
BioArchLinuxBot
|
2024-05-03 08:26 (UTC) |
r-easycelltype
|
1.6.0-1 |
0 |
0.00
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Annotate cell types for scRNA-seq data |
pekkarr
|
2024-05-06 18:06 (UTC) |
r-easycsv
|
1.0.8-3 |
0 |
0.00
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Load Multiple 'csv' and 'txt' Tables |
pekkarr
|
2024-04-25 00:07 (UTC) |
r-easylift
|
1.2.0-1 |
0 |
0.00
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An R package to perform genomic liftover |
pekkarr
|
2024-05-03 01:19 (UTC) |
r-easypubmed
|
2.13-7 |
0 |
0.00
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Search and Retrieve Scientific Publication Records from PubMed |
BioArchLinuxBot
|
2024-03-12 18:07 (UTC) |
r-easyreporting
|
1.16.0-1 |
0 |
0.00
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Helps creating report for improving Reproducible Computational Research |
BioArchLinuxBot
|
2024-05-01 20:41 (UTC) |
r-easyrnaseq
|
2.38.0-1 |
0 |
0.00
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Count summarization and normalization for RNA-Seq data |
BioArchLinuxBot
|
2023-10-27 09:50 (UTC) |
r-ebarrays
|
2.68.0-1 |
0 |
0.00
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Unified Approach for Simultaneous Gene Clustering and Differential Expression Identification |
BioArchLinuxBot
|
2024-05-02 12:17 (UTC) |
r-ebcoexpress
|
1.48.0-1 |
0 |
0.00
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EBcoexpress for Differential Co-Expression Analysis |
BioArchLinuxBot
|
2024-05-01 18:54 (UTC) |
r-ebimage
|
4.46.0-1 |
0 |
0.00
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Image processing and analysis toolbox for R |
BioArchLinuxBot
|
2024-05-02 12:07 (UTC) |
r-ebsea
|
1.32.0-1 |
0 |
0.00
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Exon Based Strategy for Expression Analysis of genes |
BioArchLinuxBot
|
2024-05-02 22:09 (UTC) |
r-ebseq
|
2.2.0-1 |
0 |
0.00
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An R package for gene and isoform differential expression analysis of RNA-seq data |
BioArchLinuxBot
|
2024-05-02 04:46 (UTC) |
r-ebseqhmm
|
1.35.0-1 |
0 |
0.00
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Bayesian analysis for identifying gene or isoform expression changes in ordered RNA-seq experiments |
BioArchLinuxBot
|
2023-10-26 06:46 (UTC) |
r-ecb
|
0.4.0-1 |
0 |
0.00
|
Provides an interface to the European Central Bank's Statistical Data Warehouse API, allowing for programmatic retrieval of a vast quantity of statistical data. |
dhn
|
2021-05-28 15:42 (UTC) |
r-echarts4r
|
0.4.5-1 |
0 |
0.00
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Create Interactive Graphs with 'Echarts JavaScript' Version 5 |
BioArchLinuxBot
|
2023-06-17 00:02 (UTC) |
r-ecoindr
|
2.0-2 |
0 |
0.00
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Ecological Indicators |
malacology
|
2024-03-06 00:05 (UTC) |
r-ecolitk
|
1.76.0-1 |
0 |
0.00
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Meta-data and tools for E. coli |
BioArchLinuxBot
|
2024-05-02 12:27 (UTC) |
r-ecosolver
|
0.5.5-3 |
0 |
0.00
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Embedded Conic Solver in R |
BioArchLinuxBot
|
2024-04-24 21:02 (UTC) |
r-ecp
|
3.1.5-1 |
0 |
0.00
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Non-Parametric Multiple Change-Point Analysis of Multivariate Data |
BioArchLinuxBot
|
2023-07-01 18:06 (UTC) |
r-ecume
|
0.9.2-1 |
0 |
0.00
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Equality of 2 (or k) Continuous Univariate and Multivariate Distributions |
BioArchLinuxBot
|
2024-05-29 18:01 (UTC) |
r-edaseq
|
2.38.0-1 |
0 |
0.00
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Exploratory Data Analysis and Normalization for RNA-Seq |
BioArchLinuxBot
|
2024-05-03 02:23 (UTC) |
r-edge
|
2.36.0-1 |
0 |
0.00
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Extraction of Differential Gene Expression |
BioArchLinuxBot
|
2024-05-02 02:40 (UTC) |
r-edger
|
4.2.0-1 |
0 |
0.00
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Empirical Analysis of Digital Gene Expression Data in R |
BioArchLinuxBot
|
2024-05-02 05:17 (UTC) |
r-edirquery
|
1.4.0-1 |
0 |
0.00
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Query the EDIR Database For Specific Gene |
pekkarr
|
2024-05-02 22:42 (UTC) |
r-editdata
|
0.1.8-1 |
0 |
0.00
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'RStudio' Addin for Editing a 'data.frame' |
orphan
|
2022-01-18 19:11 (UTC) |
r-eds
|
1.6.0-1 |
0 |
0.00
|
eds: Low-level reader for Alevin EDS format |
BioArchLinuxBot
|
2024-05-01 18:23 (UTC) |
r-eegc
|
1.28.0-1 |
0 |
0.00
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Engineering Evaluation by Gene Categorization (eegc) |
BioArchLinuxBot
|
2024-04-13 18:14 (UTC) |
r-effects
|
4.2.2-4 |
0 |
0.00
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Effect Displays for Linear, Generalized Linear, and Other Models |
pekkarr
|
2024-04-25 10:22 (UTC) |
r-effectsize
|
0.8.8-1 |
0 |
0.00
|
Indices of Effect Size and Standardized Parameters |
BioArchLinuxBot
|
2024-05-12 12:02 (UTC) |
r-effsize
|
0.8.1-9 |
0 |
0.00
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Efficient Effect Size Computation |
BioArchLinuxBot
|
2024-02-29 18:10 (UTC) |
r-egad
|
1.32.0-1 |
0 |
0.00
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Extending guilt by association by degree |
BioArchLinuxBot
|
2024-05-01 23:16 (UTC) |
r-egg
|
0.4.5-7 |
0 |
0.00
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Extensions for 'ggplot2': Custom Geom, Custom Themes, Plot Alignment, Labelled Panels, Symmetric Scales, and Fixed Panel Size |
BioArchLinuxBot
|
2022-10-18 12:52 (UTC) |
r-egsea
|
1.32.0-1 |
0 |
0.00
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Ensemble of Gene Set Enrichment Analyses |
BioArchLinuxBot
|
2024-05-03 18:36 (UTC) |
r-egseadata
|
1.32.0-1 |
0 |
0.00
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Gene set collections for the EGSEA package |
BioArchLinuxBot
|
2024-05-04 00:22 (UTC) |
r-eigenmodel
|
1.11-9 |
0 |
0.00
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Semiparametric Factor and Regression Models for Symmetric Relational Data |
BioArchLinuxBot
|
2024-03-12 18:07 (UTC) |
r-einsum
|
0.1.2-1 |
0 |
0.00
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Einstein Summation |
BioArchLinuxBot
|
2023-08-28 18:03 (UTC) |
r-eir
|
1.44.0-1 |
0 |
0.00
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Accelerated similarity searching of small molecules |
BioArchLinuxBot
|
2024-05-01 21:44 (UTC) |
r-eisar
|
1.16.0-1 |
0 |
0.00
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Exon-Intron Split Analysis (EISA) in R |
BioArchLinuxBot
|
2024-05-02 19:15 (UTC) |
r-elasticnet
|
1.3-7 |
0 |
0.00
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Elastic-Net for Sparse Estimation and Sparse PCA |
BioArchLinuxBot
|
2024-04-11 18:08 (UTC) |
r-elitism
|
1.1.1-2 |
0 |
0.00
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Equipment for Logarithmic and Linear Time Stepwise Multiple Hypothesis Testing |
BioArchLinuxBot
|
2024-03-15 14:15 (UTC) |
r-ellipse
|
0.5.0-3 |
0 |
0.00
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Functions for Drawing Ellipses and Ellipse-Like Confidence Regions |
BioArchLinuxBot
|
2024-04-24 18:56 (UTC) |
r-ellipsis
|
0.3.2-12 |
4 |
0.00
|
Tools for Working with ... |
BioArchLinuxBot
|
2024-04-25 07:06 (UTC) |
r-elliptic
|
1.4.0-10 |
0 |
0.00
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Weierstrass and Jacobi Elliptic Functions |
BioArchLinuxBot
|
2024-03-07 12:09 (UTC) |
r-elmer
|
2.28.0-1 |
0 |
0.00
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Inferring Regulatory Element Landscapes and Transcription Factor Networks Using Cancer Methylomes |
BioArchLinuxBot
|
2024-05-03 09:16 (UTC) |
r-elmer.data
|
2.28.0-1 |
0 |
0.00
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Data for the ELMER package |
BioArchLinuxBot
|
2024-05-03 07:25 (UTC) |
r-elsa
|
1.1.28-3 |
0 |
0.00
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Entropy-Based Local Indicator of Spatial Association |
pekkarr
|
2024-04-25 06:06 (UTC) |
r-emdbook
|
1.3.13-1 |
0 |
0.00
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Support Functions and Data for "Ecological Models and Data" |
BioArchLinuxBot
|
2023-07-04 00:05 (UTC) |
r-emdist
|
0.3.3-2 |
0 |
0.00
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Earth Mover's Distance |
BioArchLinuxBot
|
2024-02-19 18:09 (UTC) |
r-emdomics
|
2.34.0-1 |
0 |
0.00
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Earth Mover's Distance for Differential Analysis of Genomics Data |
BioArchLinuxBot
|
2024-05-01 20:32 (UTC) |
r-emmeans
|
1.10.2-1 |
0 |
0.00
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Estimated Marginal Means, aka Least-Squares Means |
BioArchLinuxBot
|
2024-05-20 12:01 (UTC) |
r-empiricalbrownsmethod
|
1.32.0-1 |
0 |
0.00
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Uses Brown's method to combine p-values from dependent tests |
BioArchLinuxBot
|
2024-05-02 03:43 (UTC) |
r-emt
|
1.3.1-1 |
0 |
0.00
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Exact Multinomial Test: Goodness-of-Fit Test for Discrete Multivariate Data |
BioArchLinuxBot
|
2024-03-26 18:02 (UTC) |
r-encodexplorer
|
2.20.0-6 |
0 |
0.00
|
A compilation of ENCODE metadata |
BioArchLinuxBot
|
2022-11-26 16:10 (UTC) |
r-encodexplorerdata
|
0.99.5-4 |
0 |
0.00
|
A compilation of ENCODE metadata |
BioArchLinuxBot
|
2022-06-06 00:58 (UTC) |
r-energy
|
1.7.11-1 |
0 |
0.00
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E-Statistics: Multivariate Inference via the Energy of Data |
BioArchLinuxBot
|
2022-12-22 12:02 (UTC) |
r-english
|
1.2.6-10 |
0 |
0.00
|
Translate Integers into English |
BioArchLinuxBot
|
2024-03-16 18:05 (UTC) |
r-enhancedvolcano
|
1.22.0-1 |
1 |
0.00
|
Publication-ready volcano plots with enhanced colouring and labeling |
BioArchLinuxBot
|
2024-05-01 20:44 (UTC) |
r-enhancerhomologsearch
|
1.10.0-1 |
0 |
0.00
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Identification of putative mammalian orthologs to given enhancer |
BioArchLinuxBot
|
2024-05-03 19:14 (UTC) |
r-enmcb
|
1.16.0-1 |
0 |
0.00
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Predicting Disease Progression Based on Methylation Correlated Blocks using Ensemble Models |
BioArchLinuxBot
|
2024-05-02 05:38 (UTC) |
r-enmix
|
1.40.2-1 |
0 |
0.00
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Quality control and analysis tools for Illumina DNA methylation BeadChip |
BioArchLinuxBot
|
2024-06-19 18:21 (UTC) |
r-enrichedheatmap
|
1.34.0-1 |
0 |
0.00
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Making Enriched Heatmaps |
BioArchLinuxBot
|
2024-05-02 01:11 (UTC) |
r-enrichmentbrowser
|
2.34.1-1 |
0 |
0.00
|
Seamless navigation through combined results of set-based and network-based enrichment analysis |
BioArchLinuxBot
|
2024-05-08 00:04 (UTC) |
r-enrichplot
|
1.24.0-1 |
0 |
0.00
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Visualization of Functional Enrichment Result |
BioArchLinuxBot
|
2024-05-03 00:46 (UTC) |
r-enrichr
|
3.2-1 |
0 |
0.00
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Provides an R Interface to 'Enrichr' |
BioArchLinuxBot
|
2023-04-14 18:07 (UTC) |
r-enrichtf
|
1.18.0-1 |
0 |
0.00
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Transcription Factors Enrichment Analysis |
BioArchLinuxBot
|
2023-11-01 12:42 (UTC) |
r-enrichviewnet
|
1.2.0-1 |
0 |
0.00
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From functional enrichment results to biological networks |
pekkarr
|
2024-05-08 12:09 (UTC) |
r-ensdb.hsapiens.v75
|
2.99.0-3 |
0 |
0.00
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Ensembl based annotation package |
BioArchLinuxBot
|
2022-06-06 01:03 (UTC) |
r-ensdb.hsapiens.v79
|
2.99.0-3 |
0 |
0.00
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Ensembl based annotation package |
pekkarr
|
2024-04-27 20:50 (UTC) |
r-ensdb.hsapiens.v86
|
2.99.0-3 |
0 |
0.00
|
Ensembl based annotation package |
BioArchLinuxBot
|
2022-06-06 01:03 (UTC) |
r-ensdb.mmusculus.v79
|
2.99.0-3 |
0 |
0.00
|
Ensembl based annotation package |
pekkarr
|
2024-04-27 20:52 (UTC) |
r-ensembldb
|
2.28.0-1 |
0 |
0.00
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Utilities to create and use Ensembl-based annotation databases |
BioArchLinuxBot
|
2024-05-03 02:24 (UTC) |
r-ensemblvep
|
1.46.0-1 |
0 |
0.00
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R Interface to Ensembl Variant Effect Predictor |
BioArchLinuxBot
|
2024-05-03 05:13 (UTC) |
r-ensurer
|
1.1-10 |
0 |
0.00
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Ensure Values at Runtime |
BioArchLinuxBot
|
2024-04-15 18:01 (UTC) |
r-entropy
|
1.3.1-10 |
0 |
0.00
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Estimation of Entropy, Mutual Information and Related Quantities |
BioArchLinuxBot
|
2024-04-24 19:02 (UTC) |
r-entropyexplorer
|
1.1-4 |
0 |
0.00
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Tools for Exploring Differential Shannon Entropy, Differential Coefficient of Variation and Differential Expression |
BioArchLinuxBot
|
2022-06-06 01:05 (UTC) |
r-envipat
|
2.6-3 |
0 |
0.00
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Isotope Pattern, Profile and Centroid Calculation for Mass Spectrometry |
BioArchLinuxBot
|
2024-03-14 18:13 (UTC) |
r-envisionquery
|
1.38.0-4 |
0 |
0.00
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Retrieval from the ENVISION bioinformatics data portal into R |
BioArchLinuxBot
|
2023-04-29 12:44 (UTC) |
r-envstats
|
2.8.1-1 |
0 |
0.00
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Package for Environmental Statistics, Including US EPA Guidance |
BioArchLinuxBot
|
2023-08-22 18:04 (UTC) |
r-epialleler
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1.12.0-1 |
0 |
0.00
|
Fast, Epiallele-Aware Methylation Reporter |
BioArchLinuxBot
|
2024-05-03 05:05 (UTC) |
r-epidecoder
|
1.12.0-1 |
0 |
0.00
|
epidecodeR: a functional exploration tool for epigenetic and epitranscriptomic regulation |
BioArchLinuxBot
|
2024-05-03 01:13 (UTC) |
r-epidish
|
2.20.0-1 |
0 |
0.00
|
Epigenetic Dissection of Intra-Sample-Heterogeneity |
BioArchLinuxBot
|
2024-05-01 19:05 (UTC) |
r-epigenomix
|
1.44.0-1 |
0 |
0.00
|
Epigenetic and gene transcription data normalization and integration with mixture models |
BioArchLinuxBot
|
2024-05-02 21:15 (UTC) |
r-epigrahmm
|
1.12.0-1 |
0 |
0.00
|
Epigenomic R-based analysis with hidden Markov models |
BioArchLinuxBot
|
2024-05-03 08:11 (UTC) |
r-epimix
|
1.6.1-1 |
0 |
0.00
|
an integrative tool for the population-level analysis of DNA methylation |
pekkarr
|
2024-05-05 18:11 (UTC) |
r-epimix.data
|
1.6.0-1 |
0 |
0.00
|
Data for the EpiMix package |
pekkarr
|
2024-05-04 00:56 (UTC) |
r-epimutacions
|
1.8.0-1 |
0 |
0.00
|
Robust outlier identification for DNA methylation data |
pekkarr
|
2024-05-03 14:30 (UTC) |
r-epimutacionsdata
|
1.8.0-1 |
0 |
0.00
|
Data for epimutacions package |
pekkarr
|
2024-05-04 00:10 (UTC) |
r-epinem
|
1.28.0-1 |
0 |
0.00
|
epiNEM |
BioArchLinuxBot
|
2024-05-02 01:14 (UTC) |
r-epir
|
2.0.75-1 |
0 |
0.00
|
Tools for the Analysis of Epidemiological Data |
BioArchLinuxBot
|
2024-06-17 12:03 (UTC) |
r-epistack
|
1.10.0-1 |
0 |
0.00
|
Heatmaps of Stack Profiles from Epigenetic Signals |
BioArchLinuxBot
|
2024-05-02 19:13 (UTC) |
r-epistasisga
|
1.6.0-1 |
0 |
0.00
|
An R package to identify multi-snp effects in nuclear family studies using the GADGETS method |
pekkarr
|
2024-05-02 05:40 (UTC) |
r-epitxdb
|
1.16.0-1 |
0 |
0.00
|
Storing and accessing epitranscriptomic information using the AnnotationDbi interface |
BioArchLinuxBot
|
2024-05-08 18:04 (UTC) |