r-ctggem
|
1.7.0-4 |
0 |
0.00
|
Generating Tree Hierarchy Visualizations from Gene Expression Data |
BioArchLinuxBot
|
2022-11-04 06:20 (UTC) |
r-ctrap
|
1.22.0-1 |
0 |
0.00
|
Identification of candidate causal perturbations from differential gene expression data |
BioArchLinuxBot
|
2024-05-02 02:18 (UTC) |
r-ctsge
|
1.30.0-1 |
0 |
0.00
|
Clustering of Time Series Gene Expression data |
BioArchLinuxBot
|
2024-05-01 20:34 (UTC) |
r-ctsv
|
1.6.0-1 |
0 |
0.00
|
Identification of cell-type-specific spatially variable genes accounting for excess zeros |
pekkarr
|
2024-05-03 09:05 (UTC) |
r-cubature
|
2.1.0-2 |
0 |
0.00
|
Adaptive Multivariate Integration over Hypercubes |
BioArchLinuxBot
|
2024-04-25 07:21 (UTC) |
r-cubble
|
0.3.0-3 |
0 |
0.00
|
A Vector Spatio-Temporal Data Structure for Data Analysis |
pekkarr
|
2024-04-26 00:56 (UTC) |
r-cubist
|
0.4.2.1-1 |
0 |
0.00
|
Rule- And Instance-Based Regression Modeling |
BioArchLinuxBot
|
2023-03-09 12:01 (UTC) |
r-cummerbund
|
2.46.0-1 |
0 |
0.00
|
Analysis, exploration, manipulation, and visualization of Cufflinks high-throughput sequencing data. |
BioArchLinuxBot
|
2024-05-03 06:07 (UTC) |
r-curatedtcgadata
|
1.26.0-1 |
0 |
0.00
|
Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects |
BioArchLinuxBot
|
2024-05-03 08:27 (UTC) |
r-curl
|
5.2.1-1 |
1 |
0.00
|
A Modern and Flexible Web Client for R |
pekkarr
|
2024-03-17 13:11 (UTC) |
r-curry
|
0.1.1-9 |
0 |
0.00
|
Partial Function Application with %<%, %-<%, and %><% |
BioArchLinuxBot
|
2024-03-27 18:04 (UTC) |
r-customcmpdb
|
1.14.0-1 |
0 |
0.00
|
Customize and Query Compound Annotation Database |
BioArchLinuxBot
|
2024-05-02 02:15 (UTC) |
r-customprodb
|
1.42.1-1 |
0 |
0.00
|
Generate customized protein database from NGS data, with a focus on RNA-Seq data, for proteomics search |
BioArchLinuxBot
|
2024-03-07 06:07 (UTC) |
r-cvar
|
0.5-1 |
0 |
0.00
|
Compute Expected Shortfall and Value at Risk for Continuous Distributions |
BioArchLinuxBot
|
2022-11-13 02:53 (UTC) |
r-cvauc
|
1.1.4-3 |
0 |
0.00
|
Cross-Validated Area Under the ROC Curve Confidence Intervals |
BioArchLinuxBot
|
2022-06-06 16:23 (UTC) |
r-cvms
|
1.6.1-1 |
0 |
0.00
|
Cross-Validation for Model Selection |
BioArchLinuxBot
|
2024-02-28 00:06 (UTC) |
r-cvst
|
0.2.3-3 |
0 |
0.00
|
Fast Cross-Validation via Sequential Testing |
pekkarr
|
2024-04-25 00:28 (UTC) |
r-cvtools
|
0.3.3-1 |
0 |
0.00
|
Cross-validation tools for regression models |
BioArchLinuxBot
|
2024-03-13 18:10 (UTC) |
r-cvxr
|
1.0.12-1 |
0 |
0.00
|
Disciplined Convex Optimization |
BioArchLinuxBot
|
2024-02-02 06:15 (UTC) |
r-cyanofilter
|
1.12.0-1 |
0 |
0.00
|
Phytoplankton Population Identification using Cell Pigmentation and/or Complexity |
BioArchLinuxBot
|
2024-05-01 23:12 (UTC) |
r-cycle
|
1.58.0-1 |
0 |
0.00
|
Significance of periodic expression pattern in time-series data |
BioArchLinuxBot
|
2024-05-01 22:56 (UTC) |
r-cyclocomp
|
1.1.1-1 |
0 |
0.00
|
Cyclomatic Complexity of R Code |
BioArchLinuxBot
|
2023-08-30 18:02 (UTC) |
r-cydar
|
1.28.0-1 |
0 |
0.00
|
Using Mass Cytometry for Differential Abundance Analyses |
BioArchLinuxBot
|
2024-05-02 21:37 (UTC) |
r-cytodx
|
1.24.0-1 |
0 |
0.00
|
Robust prediction of clinical outcomes using cytometry data without cell gating |
BioArchLinuxBot
|
2024-05-01 23:40 (UTC) |
r-cytofpower
|
1.10.0-1 |
0 |
0.00
|
Power analysis for CyTOF experiments |
BioArchLinuxBot
|
2024-05-02 23:01 (UTC) |
r-cytofqc
|
1.4.0-1 |
0 |
0.00
|
Labels normalized cells for CyTOF data and assigns probabilities for each label |
pekkarr
|
2024-05-03 04:00 (UTC) |
r-cytoglmm
|
1.12.0-1 |
0 |
0.00
|
Conditional Differential Analysis for Flow and Mass Cytometry Experiments |
BioArchLinuxBot
|
2024-05-01 23:44 (UTC) |
r-cytokernel
|
1.10.0-1 |
0 |
0.00
|
Differential expression using kernel-based score test |
BioArchLinuxBot
|
2024-05-02 20:27 (UTC) |
r-cytolib
|
2.16.0-1 |
0 |
0.00
|
C++ infrastructure for representing and interacting with the gated cytometry data |
BioArchLinuxBot
|
2024-05-02 05:12 (UTC) |
r-cytomapper
|
1.16.0-1 |
0 |
0.00
|
Visualization of highly multiplexed imaging data in R |
BioArchLinuxBot
|
2024-05-03 08:54 (UTC) |
r-cytomem
|
1.8.0-1 |
0 |
0.00
|
Marker Enrichment Modeling (MEM) |
pekkarr
|
2024-05-02 13:01 (UTC) |
r-cytometree
|
2.0.2-4 |
0 |
0.00
|
Automated Cytometry Gating and Annotation |
BioArchLinuxBot
|
2022-06-05 23:33 (UTC) |
r-cytoml
|
2.16.0-1 |
0 |
0.00
|
A GatingML Interface for Cross Platform Cytometry Data Sharing |
BioArchLinuxBot
|
2024-05-02 13:23 (UTC) |
r-cytopipeline
|
1.4.0-1 |
0 |
0.00
|
Automation and visualization of flow cytometry data analysis pipelines |
pekkarr
|
2024-05-04 12:20 (UTC) |
r-cytopipelinegui
|
1.0.0-1 |
0 |
0.00
|
GUI's for visualization of flow cytometry data analysis pipelines |
pekkarr
|
2023-11-20 13:45 (UTC) |
r-cytotree
|
1.6.0-4 |
0 |
0.00
|
A Toolkit for Flow And Mass Cytometry Data |
BioArchLinuxBot
|
2022-11-04 06:33 (UTC) |
r-cytoviewer
|
1.4.0-1 |
0 |
0.00
|
An interactive multi-channel image viewer for R |
pekkarr
|
2024-05-03 09:31 (UTC) |
r-dada2
|
1.30.0-1 |
0 |
0.00
|
Accurate, high-resolution sample inference from amplicon sequencing data |
greyltc
|
2023-11-02 09:37 (UTC) |
r-daewr
|
1.2.11-2 |
0 |
0.00
|
Design and Analysis of Experiments with R |
BioArchLinuxBot
|
2024-04-07 18:12 (UTC) |
r-dagitty
|
0.3.4-3 |
0 |
0.00
|
Graphical Analysis of Structural Causal Models |
pekkarr
|
2024-04-25 08:37 (UTC) |
r-daglogo
|
1.42.0-1 |
0 |
0.00
|
dagLogo: a Bioconductor package for visualizing conserved amino acid sequence pattern in groups based on probability theory |
BioArchLinuxBot
|
2024-05-03 19:07 (UTC) |
r-dalex
|
2.4.3-3 |
0 |
0.00
|
moDel Agnostic Language for Exploration and eXplanation |
pekkarr
|
2024-04-28 14:39 (UTC) |
r-dama
|
1.76.0-1 |
0 |
0.00
|
Efficient design and analysis of factorial two-colour microarray data |
BioArchLinuxBot
|
2024-05-02 04:22 (UTC) |
r-damefinder
|
1.16.0-1 |
0 |
0.00
|
Finds DAMEs - Differential Allelicly MEthylated regions |
BioArchLinuxBot
|
2024-05-03 05:11 (UTC) |
r-damirseq
|
2.16.0-1 |
0 |
0.00
|
Data Mining for RNA-seq data: normalization, feature selection and classification |
BioArchLinuxBot
|
2024-05-03 13:54 (UTC) |
r-dapar
|
1.36.0-1 |
0 |
0.00
|
Tools for the Differential Analysis of Proteins Abundance with R |
BioArchLinuxBot
|
2024-05-04 18:31 (UTC) |
r-dapardata
|
1.34.0-1 |
0 |
0.00
|
Data accompanying the DAPAR and Prostar packages |
BioArchLinuxBot
|
2024-05-04 01:16 (UTC) |
r-dart
|
1.52.0-1 |
0 |
0.00
|
Denoising Algorithm based on Relevance network Topology |
BioArchLinuxBot
|
2024-05-01 21:22 (UTC) |
r-dashboardthemes
|
1.1.6-3 |
0 |
0.00
|
Customise the Appearance of 'shinydashboard' Applications using Themes |
pekkarr
|
2024-04-25 10:36 (UTC) |
r-dasper
|
1.9.0-3 |
0 |
0.00
|
Detecting abberant splicing events from RNA-sequencing data |
BioArchLinuxBot
|
2024-04-27 20:34 (UTC) |
r-data.table
|
1.15.4-1 |
3 |
0.00
|
Extension of ‘data.frame’ |
greyltc
|
2024-04-08 14:26 (UTC) |
r-data.tree
|
1.1.0-2 |
0 |
0.00
|
General Purpose Hierarchical Data Structure |
BioArchLinuxBot
|
2024-04-10 12:08 (UTC) |
r-datamods
|
1.5.0-1 |
0 |
0.00
|
Modules to Import and Manipulate Data in 'Shiny' |
BioArchLinuxBot
|
2024-04-05 12:05 (UTC) |
r-datavisualizations
|
1.3.2-3 |
0 |
0.00
|
Visualizations of High-Dimensional Data |
BioArchLinuxBot
|
2023-10-27 04:06 (UTC) |
r-datawizard
|
0.10.0-2 |
0 |
0.00
|
Easy Data Wrangling and Statistical Transformations |
BioArchLinuxBot
|
2024-04-10 18:06 (UTC) |
r-dbi
|
1.2.2-1 |
0 |
0.00
|
R Database Interface |
pekkarr
|
2024-03-17 13:11 (UTC) |
r-dbitest
|
1.8.1-1 |
0 |
0.00
|
Testing DBI Backends |
pekkarr
|
2024-03-31 18:01 (UTC) |
r-dbplyr
|
2.5.0-1 |
1 |
0.01
|
A ‘dplyr’ Back End for Databases |
Alad
|
2024-03-20 10:06 (UTC) |
r-dbscan
|
1.1.12-1 |
0 |
0.00
|
Density Based Clustering of Applications with Noise (DBSCAN) and Related Algorithms |
BioArchLinuxBot
|
2023-11-28 18:20 (UTC) |
r-dcanr
|
1.20.0-1 |
0 |
0.00
|
Differential co-expression/association network analysis |
BioArchLinuxBot
|
2024-05-01 21:34 (UTC) |
r-dcats
|
1.2.0-1 |
0 |
0.00
|
Differential Composition Analysis Transformed by a Similarity matrix |
pekkarr
|
2024-05-02 04:49 (UTC) |
r-dce
|
1.12.0-1 |
0 |
0.00
|
Pathway Enrichment Based on Differential Causal Effects |
BioArchLinuxBot
|
2024-05-02 21:03 (UTC) |
r-dcgsa
|
1.32.0-1 |
0 |
0.00
|
Distance-correlation based Gene Set Analysis for longitudinal gene expression profiles |
BioArchLinuxBot
|
2024-05-01 19:46 (UTC) |
r-ddalpha
|
1.3.15-2 |
0 |
0.00
|
Depth-Based Classification and Calculation of Data Depth |
pekkarr
|
2024-04-25 14:14 (UTC) |
r-ddct
|
1.60.0-1 |
0 |
0.00
|
The ddCt Algorithm for the Analysis of Quantitative Real-Time PCR (qRT-PCR) |
BioArchLinuxBot
|
2024-05-02 12:29 (UTC) |
r-ddpcr
|
1.15.2-1 |
0 |
0.00
|
Analysis and Visualization of Droplet Digital PCR in R and on the Web |
BioArchLinuxBot
|
2023-08-21 00:04 (UTC) |
r-ddpcrclust
|
1.24.0-1 |
0 |
0.00
|
Clustering algorithm for ddPCR data |
BioArchLinuxBot
|
2024-05-01 23:07 (UTC) |
r-ddrtree
|
0.1.5-9 |
0 |
0.00
|
Learning Principal Graphs with DDRTree |
BioArchLinuxBot
|
2024-04-25 04:25 (UTC) |
r-dearseq
|
1.16.0-1 |
0 |
0.00
|
Differential Expression Analysis for RNA-seq data through a robust variance component test |
BioArchLinuxBot
|
2024-05-01 20:37 (UTC) |
r-debcam
|
1.22.0-1 |
0 |
0.00
|
Deconvolution by Convex Analysis of Mixtures |
BioArchLinuxBot
|
2024-05-02 20:29 (UTC) |
r-debrowser
|
1.32.0-1 |
0 |
0.00
|
Interactive Differential Expresion Analysis Browser |
BioArchLinuxBot
|
2024-05-03 13:56 (UTC) |
r-debugme
|
1.2.0-1 |
0 |
0.00
|
Specify debug messages as special string constants, and control debugging of packages via environment variables. |
peippo
|
2024-04-29 09:04 (UTC) |
r-decipher
|
3.0.0-1 |
0 |
0.00
|
Tools for curating, analyzing, and manipulating biological sequences |
BioArchLinuxBot
|
2024-05-02 00:05 (UTC) |
r-deco
|
1.13.0-3 |
0 |
0.00
|
Decomposing Heterogeneous Cohorts using Omic Data Profiling |
BioArchLinuxBot
|
2024-02-12 18:05 (UTC) |
r-decomplexdisease
|
1.18.0-4 |
0 |
0.00
|
A tool for differential expression analysis and DEGs based investigation to complex diseases by bi-clustering analysis |
BioArchLinuxBot
|
2023-04-29 06:34 (UTC) |
r-decomptumor2sig
|
2.20.0-1 |
0 |
0.00
|
Decomposition of individual tumors into mutational signatures by signature refitting |
BioArchLinuxBot
|
2024-05-03 05:07 (UTC) |
r-deconrnaseq
|
1.46.0-1 |
0 |
0.00
|
Deconvolution of Heterogeneous Tissue Samples for mRNA-Seq data |
BioArchLinuxBot
|
2024-05-01 22:46 (UTC) |
r-deconstructsigs
|
1.8.0-3 |
0 |
0.00
|
Identifies Signatures Present in a Tumor Sample |
BioArchLinuxBot
|
2022-06-05 23:46 (UTC) |
r-decontam
|
1.24.0-1 |
0 |
0.00
|
Identify Contaminants in Marker-gene and Metagenomics Sequencing Data |
BioArchLinuxBot
|
2024-05-01 20:15 (UTC) |
r-decontx
|
1.2.0-1 |
0 |
0.00
|
Decontamination of single cell genomics data |
pekkarr
|
2024-05-03 03:58 (UTC) |
r-deconvr
|
1.10.0-1 |
0 |
0.00
|
Simulation and Deconvolution of Omic Profiles |
BioArchLinuxBot
|
2024-05-03 14:18 (UTC) |
r-decor
|
1.0.2-2 |
0 |
0.00
|
Retrieve Code Decorations |
peippo
|
2023-10-16 07:14 (UTC) |
r-decoupler
|
2.9.7-1 |
0 |
0.00
|
Ensemble of computational methods to infer biological activities from omics data |
BioArchLinuxBot
|
2024-05-03 18:05 (UTC) |
r-deepbluer
|
1.26.0-1 |
0 |
0.00
|
DeepBlueR |
BioArchLinuxBot
|
2023-04-27 15:33 (UTC) |
r-deeppincs
|
1.12.0-1 |
0 |
0.00
|
Protein Interactions and Networks with Compounds based on Sequences using Deep Learning |
BioArchLinuxBot
|
2024-05-01 23:59 (UTC) |
r-deepsnv
|
1.50.0-1 |
0 |
0.00
|
Detection of subclonal SNVs in deep sequencing data. |
BioArchLinuxBot
|
2024-05-03 04:39 (UTC) |
r-deformats
|
1.32.0-1 |
0 |
0.00
|
Differential gene expression data formats converter |
BioArchLinuxBot
|
2024-05-02 22:05 (UTC) |
r-degnorm
|
1.12.0-1 |
0 |
0.00
|
DegNorm: degradation normalization for RNA-seq data |
BioArchLinuxBot
|
2023-10-27 10:27 (UTC) |
r-degraph
|
1.56.0-1 |
0 |
0.00
|
Two-sample tests on a graph |
BioArchLinuxBot
|
2024-05-01 23:02 (UTC) |
r-degreport
|
1.40.0-1 |
0 |
0.00
|
Report of DEG analysis |
BioArchLinuxBot
|
2024-05-02 22:19 (UTC) |
r-degseq
|
1.58.0-1 |
0 |
0.00
|
Identify Differentially Expressed Genes from RNA-seq data |
BioArchLinuxBot
|
2024-05-01 23:24 (UTC) |
r-delaporte
|
8.4.0-1 |
0 |
0.00
|
Statistical Functions for the Delaporte Distribution |
BioArchLinuxBot
|
2024-04-05 00:01 (UTC) |
r-delayedarray
|
0.28.0-1 |
0 |
0.00
|
A unified framework for working transparently with on-disk and in-memory array-like datasets |
greyltc
|
2023-11-02 09:45 (UTC) |
r-delayeddataframe
|
1.20.0-1 |
0 |
0.00
|
Delayed operation on DataFrame using standard DataFrame metaphor |
BioArchLinuxBot
|
2024-05-01 22:33 (UTC) |
r-delayedmatrixstats
|
1.26.0-1 |
0 |
0.00
|
Functions that Apply to Rows and Columns of 'DelayedMatrix' Objects |
BioArchLinuxBot
|
2024-05-02 13:03 (UTC) |
r-delayedrandomarray
|
1.12.0-1 |
0 |
0.00
|
Delayed Arrays of Random Values |
BioArchLinuxBot
|
2024-05-02 13:17 (UTC) |
r-delayedtensor
|
1.10.0-1 |
0 |
0.00
|
R package for sparse and out-of-core arithmetic and decomposition of Tensor |
BioArchLinuxBot
|
2024-05-02 00:49 (UTC) |
r-deldir
|
2.0.4-2 |
0 |
0.00
|
Delaunay Triangulation and Dirichlet (Voronoi) Tessellation |
BioArchLinuxBot
|
2024-03-07 12:06 (UTC) |
r-delocal
|
1.4.0-1 |
0 |
0.00
|
Identifies differentially expressed genes with respect to other local genes |
pekkarr
|
2024-05-02 22:19 (UTC) |
r-deltacapturec
|
1.18.0-1 |
0 |
0.00
|
This Package Discovers Meso-scale Chromatin Remodeling from 3C Data |
BioArchLinuxBot
|
2024-05-02 22:15 (UTC) |
r-deltagseg
|
1.44.0-1 |
0 |
0.00
|
deltaGseg |
BioArchLinuxBot
|
2024-05-01 20:15 (UTC) |
r-demand
|
1.34.0-1 |
0 |
0.00
|
DeMAND |
BioArchLinuxBot
|
2024-05-02 04:21 (UTC) |
r-deming
|
1.4-3 |
0 |
0.00
|
Deming, Theil-Sen, Passing-Bablock and Total Least Squares Regression |
pekkarr
|
2024-04-24 20:45 (UTC) |
r-demixt
|
1.20.0-1 |
0 |
0.00
|
Cell type-specific deconvolution of heterogeneous tumor samples with two or three components using expression data from RNAseq or microarray platforms |
BioArchLinuxBot
|
2024-05-03 13:57 (UTC) |
r-demography
|
2.0-1 |
0 |
0.00
|
Forecasting Mortality, Fertility, Migration and Population Data |
AlexBocken
|
2024-01-11 20:26 (UTC) |
r-demuxmix
|
1.6.0-1 |
0 |
0.00
|
Demultiplexing oligo-barcoded scRNA-seq data using regression mixture models |
pekkarr
|
2024-05-02 04:53 (UTC) |
r-demuxsnp
|
1.0.0-3 |
0 |
0.00
|
scRNAseq demultiplexing using cell hashing and SNPs |
pekkarr
|
2024-04-28 18:02 (UTC) |
r-dendextend
|
1.17.1-1 |
0 |
0.00
|
Extending 'dendrogram' Functionality in R |
BioArchLinuxBot
|
2023-03-25 18:06 (UTC) |
r-densestbayes
|
1.0.2.2-5 |
0 |
0.00
|
Density Estimation via Bayesian Inference Engines |
BioArchLinuxBot
|
2024-02-08 13:49 (UTC) |
r-densityclust
|
0.3.3-1 |
0 |
0.00
|
Clustering by Fast Search and Find of Density Peaks |
BioArchLinuxBot
|
2024-01-30 01:01 (UTC) |
r-densvis
|
1.14.0-1 |
0 |
0.00
|
Density-Preserving Data Visualization via Non-Linear Dimensionality Reduction |
BioArchLinuxBot
|
2024-05-02 00:54 (UTC) |
r-deoptimr
|
1.1.3-3 |
0 |
0.00
|
Differential Evolution Optimization in Pure R |
pekkarr
|
2024-04-24 19:11 (UTC) |
r-dep
|
1.26.0-1 |
0 |
0.00
|
Differential Enrichment analysis of Proteomics data |
BioArchLinuxBot
|
2024-05-03 02:08 (UTC) |
r-depecher
|
1.18.0-1 |
0 |
0.00
|
Determination of essential phenotypic elements of clusters in high-dimensional entities |
BioArchLinuxBot
|
2023-10-28 12:45 (UTC) |
r-depinfer
|
1.8.0-1 |
0 |
0.00
|
Inferring tumor-specific cancer dependencies through integrating ex-vivo drug response assays and drug-protein profiling |
pekkarr
|
2024-05-02 05:24 (UTC) |
r-depmap
|
1.18.0-1 |
0 |
0.00
|
Cancer Dependency Map Data Package |
BioArchLinuxBot
|
2024-05-04 06:02 (UTC) |
r-depmixs4
|
1.5.0-4 |
0 |
0.00
|
Dependent Mixture Models - Hidden Markov Models of GLMs and Other Distributions in S4 |
BioArchLinuxBot
|
2022-06-05 23:57 (UTC) |
r-deprecated-215
|
215-3 |
2 |
0.00
|
Language and environment for statistical computing and graphics - deprecated version (2.15.3) |
daroczig
|
2015-06-22 04:29 (UTC) |
r-deqms
|
1.22.0-1 |
0 |
0.00
|
a tool to perform statistical analysis of differential protein expression for quantitative proteomics data. |
BioArchLinuxBot
|
2024-05-01 20:20 (UTC) |
r-derfinder
|
1.38.0-1 |
0 |
0.00
|
Annotation-agnostic differential expression analysis of RNA-seq data at base-pair resolution via the DER Finder approach |
BioArchLinuxBot
|
2024-05-03 08:18 (UTC) |
r-derfinderhelper
|
1.38.0-1 |
0 |
0.00
|
derfinder helper package |
BioArchLinuxBot
|
2024-05-01 22:01 (UTC) |
r-derfinderplot
|
1.38.0-1 |
0 |
0.00
|
Plotting functions for derfinder |
BioArchLinuxBot
|
2024-05-03 13:28 (UTC) |
r-deriv
|
4.1.3-9 |
0 |
0.00
|
Symbolic Differentiation |
BioArchLinuxBot
|
2024-02-09 20:06 (UTC) |
r-desc
|
1.4.3-1 |
3 |
0.00
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Manipulate DESCRIPTION Files |
greyltc
|
2023-12-11 12:36 (UTC) |
r-descan2
|
1.24.0-1 |
0 |
0.00
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Differential Enrichment Scan 2 |
BioArchLinuxBot
|
2024-05-03 12:33 (UTC) |
r-desctools
|
0.99.54-1 |
1 |
0.00
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Tools for Descriptive Statistics |
BioArchLinuxBot
|
2024-02-04 00:07 (UTC) |
r-deseq2
|
1.42.0-2 |
2 |
0.00
|
Differential gene expression analysis based on the negative binomial distribution. |
vejnar
|
2023-11-26 17:42 (UTC) |
r-desingle
|
1.24.0-1 |
0 |
0.00
|
DEsingle for detecting three types of differential expression in single-cell RNA-seq data |
BioArchLinuxBot
|
2024-05-01 19:48 (UTC) |
r-desirability
|
2.1-8 |
0 |
0.00
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Function Optimization and Ranking via Desirability Functions |
BioArchLinuxBot
|
2024-03-08 00:17 (UTC) |
r-desolve
|
1.40-2 |
1 |
0.00
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Solvers for Initial Value Problems of Differential Equations ('ODE', 'DAE', 'DDE') |
BioArchLinuxBot
|
2024-04-24 19:30 (UTC) |
r-despace
|
1.4.0-1 |
0 |
0.00
|
a framework to discover spatially variable genes |
pekkarr
|
2024-05-03 09:04 (UTC) |
r-destiny
|
3.18.0-1 |
0 |
0.00
|
Creates diffusion maps |
BioArchLinuxBot
|
2024-05-02 21:33 (UTC) |
r-desubs
|
1.30.0-1 |
0 |
0.00
|
DEsubs: an R package for flexible identification of differentially expressed subpathways using RNA-seq expression experiments |
BioArchLinuxBot
|
2024-05-02 22:13 (UTC) |
r-detectseparation
|
0.3-3 |
0 |
0.00
|
Detect and Check for Separation and Infinite Maximum Likelihood Estimates |
BioArchLinuxBot
|
2022-11-26 14:34 (UTC) |
r-devel-svn
|
r78409-1 |
8 |
0.00
|
Language and environment for statistical computing and graphics - development version (SVN) |
daroczig
|
2020-05-11 14:06 (UTC) |
r-devtools
|
2.4.5-5 |
1 |
0.00
|
Tools to Make Developing R Packages Easier |
BioArchLinuxBot
|
2022-11-26 15:45 (UTC) |
r-dewseq
|
1.18.0-1 |
0 |
0.00
|
Differential Expressed Windows Based on Negative Binomial Distribution |
BioArchLinuxBot
|
2024-05-02 22:08 (UTC) |
r-dexma
|
1.12.0-1 |
0 |
0.00
|
Differential Expression Meta-Analysis |
BioArchLinuxBot
|
2024-05-02 02:42 (UTC) |
r-dexmadata
|
1.12.0-1 |
0 |
0.00
|
Data package for DExMA package |
BioArchLinuxBot
|
2024-05-04 00:42 (UTC) |
r-dexseq
|
1.50.0-1 |
0 |
0.00
|
Inference of differential exon usage in RNA-Seq |
BioArchLinuxBot
|
2024-05-03 13:01 (UTC) |
r-dfidx
|
0.0.5-3 |
0 |
0.00
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Indexed Data Frames |
pekkarr
|
2024-04-25 11:18 (UTC) |
r-dfp
|
1.62.0-1 |
0 |
0.00
|
Gene Selection |
BioArchLinuxBot
|
2024-05-02 12:42 (UTC) |
r-dgeobj
|
1.1.2-3 |
0 |
0.00
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Differential Gene Expression (DGE) Analysis Results Data Object |
pekkarr
|
2024-04-26 16:04 (UTC) |
r-dgeobj.utils
|
1.0.6-3 |
0 |
0.00
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Differential Gene Expression (DGE) Analysis Utility Toolkit |
pekkarr
|
2024-04-30 12:19 (UTC) |
r-dgof
|
1.4-6 |
0 |
0.00
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Discrete Goodness-of-Fit Tests |
BioArchLinuxBot
|
2024-03-15 14:20 (UTC) |
r-dharma
|
0.4.6-1 |
0 |
0.00
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Residual Diagnostics for Hierarchical (Multi-Level / Mixed) Regression Models |
pekkarr
|
2024-03-23 11:29 (UTC) |
r-diagram
|
1.6.5-7 |
0 |
0.00
|
Functions for Visualising Simple Graphs (Networks), Plotting Flow Diagrams |
BioArchLinuxBot
|
2024-04-12 12:06 (UTC) |
r-diagrammer
|
1.0.11-1 |
0 |
0.00
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Graph/Network Visualization |
BioArchLinuxBot
|
2024-02-03 00:04 (UTC) |
r-diagrammersvg
|
0.1-2 |
0 |
0.00
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Export DiagrammeR Graphviz Graphs as SVG |
dringsim
|
2023-08-22 03:00 (UTC) |
r-dialignr
|
2.12.0-1 |
0 |
0.00
|
Dynamic Programming Based Alignment of MS2 Chromatograms |
BioArchLinuxBot
|
2024-05-01 22:44 (UTC) |
r-dials
|
1.2.1-1 |
0 |
0.00
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Tools for Creating Tuning Parameter Values |
pekkarr
|
2024-02-22 18:09 (UTC) |
r-dicedesign
|
1.10-2 |
0 |
0.00
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Designs of Computer Experiments |
pekkarr
|
2024-04-24 19:28 (UTC) |
r-dicekriging
|
1.6.0-1 |
0 |
0.00
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Kriging Methods for Computer Experiments |
orphan
|
2022-01-18 19:08 (UTC) |
r-dicer
|
2.2.0-3 |
0 |
0.00
|
Diverse Cluster Ensemble in R |
pekkarr
|
2024-02-24 00:07 (UTC) |
r-dichromat
|
2.0.0.1-9 |
0 |
0.00
|
Color Schemes for Dichromats |
BioArchLinuxBot
|
2024-04-24 19:21 (UTC) |
r-diffbind
|
3.14.0-1 |
0 |
0.00
|
Differential Binding Analysis of ChIP-Seq Peak Data |
BioArchLinuxBot
|
2024-05-03 09:19 (UTC) |
r-diffcoexp
|
1.24.0-1 |
0 |
0.00
|
Differential Co-expression Analysis |
BioArchLinuxBot
|
2024-05-02 20:55 (UTC) |
r-diffcorr
|
0.4.3-1 |
0 |
0.00
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Analyzing and Visualizing Differential Correlation Networks in Biological Data |
BioArchLinuxBot
|
2023-08-25 12:10 (UTC) |
r-diffcyt
|
1.24.0-1 |
0 |
0.00
|
Differential discovery in high-dimensional cytometry via high-resolution clustering |
BioArchLinuxBot
|
2024-05-02 20:28 (UTC) |
r-differentialregulation
|
2.2.0-1 |
0 |
0.00
|
Differentially regulated genes from scRNA-seq data |
pekkarr
|
2024-05-02 21:45 (UTC) |
r-diffgeneanalysis
|
1.86.0-1 |
0 |
0.00
|
Performs differential gene expression Analysis |
BioArchLinuxBot
|
2024-05-02 04:37 (UTC) |
r-diffhic
|
1.36.0-1 |
0 |
0.00
|
Differential Analyis of Hi-C Data |
BioArchLinuxBot
|
2024-05-03 03:12 (UTC) |
r-difflogo
|
2.28.0-1 |
0 |
0.00
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DiffLogo: A comparative visualisation of biooligomer motifs |
BioArchLinuxBot
|
2024-05-01 18:10 (UTC) |
r-diffloop
|
1.24.0-4 |
0 |
0.00
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Identifying differential DNA loops from chromatin topology data |
BioArchLinuxBot
|
2022-11-04 06:35 (UTC) |
r-diffobj
|
0.3.5-1 |
2 |
0.00
|
Diffs for R Objects |
greyltc
|
2022-01-13 18:10 (UTC) |
r-diffr
|
0.1-4 |
0 |
0.00
|
Display Differences Between Two Files using Codediff Library |
BioArchLinuxBot
|
2022-06-06 00:09 (UTC) |
r-diffusionmap
|
1.2.0-3 |
0 |
0.00
|
Diffusion Map |
pekkarr
|
2024-04-25 13:10 (UTC) |
r-diffustats
|
1.24.0-1 |
0 |
0.00
|
Diffusion scores on biological networks |
BioArchLinuxBot
|
2024-05-02 05:36 (UTC) |
r-diffutr
|
1.12.0-1 |
0 |
0.00
|
diffUTR: Streamlining differential exon and 3' UTR usage |
BioArchLinuxBot
|
2024-05-03 13:46 (UTC) |
r-diffviewer
|
0.1.1-1 |
0 |
0.00
|
HTML Widget to Show File Differences |
peippo
|
2023-03-21 10:27 (UTC) |
r-digest
|
0.6.35-1 |
4 |
0.00
|
Create Compact Hash Digests of R Objects |
BioArchLinuxBot
|
2024-03-11 18:17 (UTC) |
r-diggit
|
1.36.0-1 |
0 |
0.00
|
Inference of Genetic Variants Driving Cellular Phenotypes |
BioArchLinuxBot
|
2024-05-01 23:58 (UTC) |
r-digittests
|
0.1.2-4 |
0 |
0.00
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Tests for Detecting Irregular Digit Patterns |
BioArchLinuxBot
|
2024-03-07 12:09 (UTC) |
r-dimred
|
0.2.6-5 |
0 |
0.00
|
A Framework for Dimensionality Reduction |
pekkarr
|
2024-04-26 01:01 (UTC) |
r-dino
|
1.10.0-1 |
0 |
0.00
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Normalization of Single-Cell mRNA Sequencing Data |
BioArchLinuxBot
|
2024-05-03 01:36 (UTC) |
r-diptest
|
0.77.1-1 |
0 |
0.00
|
Hartigan's Dip Test Statistic for Unimodality - Corrected |
BioArchLinuxBot
|
2024-04-11 00:01 (UTC) |
r-dir.expiry
|
1.12.0-1 |
0 |
0.00
|
Managing Expiration for Cache Directories |
BioArchLinuxBot
|
2024-05-02 04:35 (UTC) |
r-directlabels
|
2024.1.21-4 |
0 |
0.00
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Direct Labels for Multicolor Plots |
BioArchLinuxBot
|
2024-04-10 12:09 (UTC) |
r-director
|
1.30.0-1 |
0 |
0.00
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A dynamic visualization tool of multi-level data |
BioArchLinuxBot
|
2024-05-01 19:57 (UTC) |
r-directpa
|
1.5.1-3 |
0 |
0.00
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Direction Analysis for Pathways and Kinases |
pekkarr
|
2024-04-25 23:01 (UTC) |
r-dirichletmultinomial
|
1.46.0-1 |
0 |
0.00
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Dirichlet-Multinomial Mixture Model Machine Learning for Microbiome Data |
BioArchLinuxBot
|
2024-05-01 22:01 (UTC) |
r-dirichletreg
|
0.7.1-4 |
0 |
0.00
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Dirichlet Regression |
BioArchLinuxBot
|
2022-06-06 00:13 (UTC) |
r-dirmult
|
0.1.3.5-9 |
0 |
0.00
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Estimation in Dirichlet-Multinomial Distribution |
BioArchLinuxBot
|
2024-04-24 21:41 (UTC) |
r-discordant
|
1.28.0-1 |
0 |
0.00
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The Discordant Method: A Novel Approach for Differential Correlation |
BioArchLinuxBot
|
2024-05-01 20:08 (UTC) |
r-discorhythm
|
1.20.0-1 |
0 |
0.00
|
Interactive Workflow for Discovering Rhythmicity in Biological Data |
BioArchLinuxBot
|
2024-05-02 19:33 (UTC) |
r-discriminer
|
0.1.29-6 |
0 |
0.00
|
Tools of the Trade for Discriminant Analysis |
BioArchLinuxBot
|
2022-06-27 06:03 (UTC) |
r-distances
|
0.1.10-2 |
0 |
0.00
|
Tools for Distance Metrics |
BioArchLinuxBot
|
2024-03-07 12:09 (UTC) |
r-distillery
|
1.2.1-7 |
0 |
0.00
|
Method Functions for Confidence Intervals and to Distill Information from an Object |
BioArchLinuxBot
|
2024-02-29 00:03 (UTC) |
r-distinct
|
1.16.0-1 |
0 |
0.00
|
distinct: a method for differential analyses via hierarchical permutation tests |
BioArchLinuxBot
|
2024-05-03 01:48 (UTC) |
r-distr
|
2.9.3-1 |
0 |
0.00
|
Object Oriented Implementation of Distributions |
BioArchLinuxBot
|
2024-01-30 01:13 (UTC) |
r-distrex
|
2.9.2-1 |
0 |
0.00
|
Extensions of Package 'distr' |
BioArchLinuxBot
|
2024-01-30 12:02 (UTC) |
r-distributional
|
0.4.0-1 |
0 |
0.00
|
Vectorised Probability Distributions |
BioArchLinuxBot
|
2024-02-07 18:05 (UTC) |
r-distributions3
|
0.2.1-3 |
0 |
0.00
|
Probability Distributions as S3 Objects |
pekkarr
|
2024-04-25 13:03 (UTC) |
r-distributionutils
|
0.6.1-2 |
0 |
0.00
|
Distribution Utilities |
BioArchLinuxBot
|
2024-02-29 18:05 (UTC) |
r-distro
|
0.1.0-1 |
0 |
0.00
|
Linux Distribution Properties |
peippo
|
2023-03-22 10:28 (UTC) |
r-dittoseq
|
1.16.0-1 |
0 |
0.00
|
User Friendly Single-Cell and Bulk RNA Sequencing Visualization |
BioArchLinuxBot
|
2024-05-02 21:19 (UTC) |
r-divergence
|
1.20.0-1 |
0 |
0.00
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Divergence: Functionality for assessing omics data by divergence with respect to a baseline |
BioArchLinuxBot
|
2024-05-02 19:34 (UTC) |
r-dixontest
|
1.0.4-4 |
0 |
0.00
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Dixon's Ratio Test for Outlier Detection |
BioArchLinuxBot
|
2024-04-24 19:51 (UTC) |
r-dks
|
1.50.0-1 |
0 |
0.00
|
The double Kolmogorov-Smirnov package for evaluating multiple testing procedures. |
BioArchLinuxBot
|
2024-05-01 19:11 (UTC) |
r-dmcfb
|
1.18.0-1 |
0 |
0.00
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Differentially Methylated Cytosines via a Bayesian Functional Approach |
BioArchLinuxBot
|
2024-05-03 01:07 (UTC) |
r-dmchmm
|
1.26.0-1 |
0 |
0.00
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Differentially Methylated CpG using Hidden Markov Model |
BioArchLinuxBot
|
2024-05-03 01:10 (UTC) |
r-dml
|
1.1.0-4 |
0 |
0.00
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Distance Metric Learning in R |
BioArchLinuxBot
|
2022-06-06 00:20 (UTC) |
r-dmrcaller
|
1.36.0-1 |
0 |
0.00
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Differentially Methylated Regions caller |
BioArchLinuxBot
|
2024-05-01 22:17 (UTC) |
r-dmrcate
|
2.99.6-1 |
0 |
0.00
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Methylation array and sequencing spatial analysis methods |
BioArchLinuxBot
|
2024-05-03 15:14 (UTC) |
r-dmrforpairs
|
1.35.0-2 |
0 |
0.00
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identifying Differentially Methylated Regions between unique samples using array based methylation profiles |
BioArchLinuxBot
|
2024-02-11 18:14 (UTC) |
r-dmrscan
|
1.26.0-1 |
0 |
0.00
|
Detection of Differentially Methylated Regions |
BioArchLinuxBot
|
2024-05-01 22:19 (UTC) |
r-dmrseq
|
1.24.0-1 |
0 |
0.00
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Detection and inference of differentially methylated regions from Whole Genome Bisulfite Sequencing |
BioArchLinuxBot
|
2024-05-03 05:32 (UTC) |
r-dmt
|
0.8.20-6 |
0 |
0.00
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Dependency Modeling Toolkit |
BioArchLinuxBot
|
2022-06-27 06:05 (UTC) |
r-dmwr
|
0.4.1-4 |
0 |
0.00
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Data Mining with R, learning with case studies |
BioArchLinuxBot
|
2022-06-06 00:23 (UTC) |
r-dmwr2
|
0.0.2-4 |
0 |
0.00
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Functions and Data for the Second Edition of "Data Mining with R" |
BioArchLinuxBot
|
2022-06-06 00:23 (UTC) |
r-dnabarcodecompatibility
|
1.20.0-1 |
0 |
0.00
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A Tool for Optimizing Combinations of DNA Barcodes Used in Multiplexed Experiments on Next Generation Sequencing Platforms |
BioArchLinuxBot
|
2024-05-01 20:10 (UTC) |
r-dnabarcodes
|
1.34.0-1 |
0 |
0.00
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A tool for creating and analysing DNA barcodes used in Next Generation Sequencing multiplexing experiments |
BioArchLinuxBot
|
2024-05-02 04:44 (UTC) |
r-dnacopy
|
1.78.0-1 |
0 |
0.00
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DNA Copy Number Data Analysis |
BioArchLinuxBot
|
2024-05-02 03:19 (UTC) |
r-dnafusion
|
1.6.0-1 |
0 |
0.00
|
Identification of gene fusions using paired-end sequencing |
pekkarr
|
2024-05-03 02:54 (UTC) |
r-dnashaper
|
1.32.0-1 |
0 |
0.00
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High-throughput prediction of DNA shape features |
BioArchLinuxBot
|
2024-05-02 00:17 (UTC) |
r-dnet
|
1.1.7-7 |
0 |
0.00
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Integrative Analysis of Omics Data in Terms of Network, Evolution and Ontology |
BioArchLinuxBot
|
2024-02-16 12:02 (UTC) |
r-do.db
|
2.9-4 |
0 |
0.00
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A set of annotation maps describing the entire Disease Ontology |
BioArchLinuxBot
|
2022-06-06 00:26 (UTC) |
r-doby
|
4.6.21-1 |
0 |
0.00
|
Groupwise Statistics, LSmeans, Linear Estimates, Utilities |
BioArchLinuxBot
|
2024-04-30 00:01 (UTC) |
r-dockerfiler
|
0.2.2-2 |
0 |
0.00
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Easy Dockerfile Creation from R |
BioArchLinuxBot
|
2024-05-01 12:01 (UTC) |
r-docopt
|
0.7.1-8 |
0 |
0.00
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Command-Line Interface Specification Language |
dhn
|
2024-04-25 07:09 (UTC) |
r-doe.base
|
1.2.4-1 |
0 |
0.00
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Full Factorials, Orthogonal Arrays and Base Utilities for DoE Packages |
BioArchLinuxBot
|
2023-11-15 00:04 (UTC) |
r-domc
|
1.3.8-3 |
0 |
0.00
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Foreach Parallel Adaptor for 'parallel' |
pekkarr
|
2024-04-25 08:09 (UTC) |
r-dominoeffect
|
1.22.0-1 |
0 |
0.00
|
Identification and Annotation of Protein Hotspot Residues |
BioArchLinuxBot
|
2023-10-27 12:44 (UTC) |
r-doparallel
|
1.0.17-9 |
0 |
0.00
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Foreach Parallel Adaptor for the 'parallel' Package |
pekkarr
|
2024-04-26 16:57 (UTC) |
r-doppelgangr
|
1.32.0-1 |
0 |
0.00
|
Identify likely duplicate samples from genomic or meta-data |
BioArchLinuxBot
|
2024-05-03 13:52 (UTC) |
r-dorng
|
1.8.6-3 |
0 |
0.00
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Generic Reproducible Parallel Backend for 'foreach' Loops |
BioArchLinuxBot
|
2023-02-09 18:08 (UTC) |
r-dorothea
|
1.16.0-1 |
0 |
0.00
|
Collection Of Human And Mouse TF Regulons |
BioArchLinuxBot
|
2024-05-03 18:23 (UTC) |
r-doscheda
|
1.26.0-1 |
0 |
0.00
|
A DownStream Chemo-Proteomics Analysis Pipeline |
BioArchLinuxBot
|
2024-05-02 00:50 (UTC) |
r-dose
|
3.30.0-1 |
0 |
0.00
|
Disease Ontology Semantic and Enrichment analysis |
BioArchLinuxBot
|
2024-05-02 23:22 (UTC) |
r-doser
|
1.20.0-1 |
0 |
0.00
|
doseR |
BioArchLinuxBot
|
2024-05-02 19:52 (UTC) |
r-dosnow
|
1.0.20-4 |
0 |
0.00
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Foreach Parallel Adaptor for the 'snow' Package |
BioArchLinuxBot
|
2022-06-06 00:30 (UTC) |
r-dotcall64
|
1.1.1-2 |
0 |
0.00
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Enhanced Foreign Function Interface Supporting Long Vectors |
BioArchLinuxBot
|
2024-03-16 12:06 (UTC) |
r-doubletrouble
|
1.2.5-1 |
0 |
0.00
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Identification and classification of duplicated genes |
pekkarr
|
2024-02-07 12:07 (UTC) |
r-downlit
|
0.4.3-1 |
0 |
0.00
|
Syntax Highlighting and Automatic Linking |
BioArchLinuxBot
|
2023-06-29 22:58 (UTC) |
r-downloader
|
0.4-4 |
0 |
0.00
|
Download Files over HTTP and HTTPS |
BioArchLinuxBot
|
2022-06-06 00:30 (UTC) |
r-dpeak
|
1.12.0-2 |
0 |
0.00
|
dPeak (Deconvolution of Peaks in ChIP-seq Analysis) |
BioArchLinuxBot
|
2024-02-12 18:04 (UTC) |
r-dplr
|
1.7.6-1 |
0 |
0.00
|
Dendrochronology Program Library in R |
BioArchLinuxBot
|
2023-12-01 00:13 (UTC) |
r-dplyr
|
1.1.4-2 |
2 |
0.00
|
A Grammar of Data Manipulation |
pekkarr
|
2024-03-17 12:27 (UTC) |
r-dqrng
|
0.3.2-2 |
0 |
0.00
|
Fast Pseudo Random Number Generators |
BioArchLinuxBot
|
2024-01-21 18:01 (UTC) |
r-drawer
|
0.2.0.1-1 |
0 |
0.00
|
An Interactive HTML Image Editing Tool |
BioArchLinuxBot
|
2022-08-20 05:33 (UTC) |
r-drawproteins
|
1.24.0-1 |
0 |
0.00
|
Package to Draw Protein Schematics from Uniprot API output |
BioArchLinuxBot
|
2024-05-01 20:22 (UTC) |
r-drawr
|
1.0.3-3 |
0 |
0.00
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Discriminative Random Walk with Restart |
BioArchLinuxBot
|
2022-06-06 00:33 (UTC) |
r-drc
|
3.0.1-3 |
0 |
0.00
|
Analysis of Dose-Response Curves |
BioArchLinuxBot
|
2022-06-06 00:33 (UTC) |
r-dreamerr
|
1.4.0-2 |
0 |
0.00
|
Error Handling Made Easy |
pekkarr
|
2024-04-25 04:59 (UTC) |
r-dreamlet
|
1.2.0-1 |
0 |
0.00
|
Scalable differential expression analysis of single cell transcriptomics datasets with complex study designs |
pekkarr
|
2024-05-03 14:42 (UTC) |
r-drimpute
|
1.0-4 |
0 |
0.00
|
Imputing Dropout Events in Single-Cell RNA-Sequencing Data |
BioArchLinuxBot
|
2022-06-06 00:34 (UTC) |
r-drimseq
|
1.32.0-1 |
0 |
0.00
|
Differential transcript usage and tuQTL analyses with Dirichlet-multinomial model in RNA-seq |
BioArchLinuxBot
|
2024-05-01 22:25 (UTC) |
r-drivernet
|
1.44.0-1 |
0 |
0.00
|
uncovering somatic driver mutations modulating transcriptional networks in cancer |
BioArchLinuxBot
|
2024-05-02 04:21 (UTC) |
r-dropletutils
|
1.24.0-1 |
0 |
0.00
|
Utilities for Handling Single-Cell Droplet Data |
BioArchLinuxBot
|
2024-05-03 00:07 (UTC) |
r-drr
|
0.0.4-3 |
0 |
0.00
|
Dimensionality Reduction via Regression |
pekkarr
|
2024-04-25 03:42 (UTC) |