iqtree-mpi
|
.2.3.4-1 |
0 |
0.00
|
Efficient phylogenomic software by maximum likelihood; multicore version (OMP). https://doi.org/10.1093/molbev/msaa015 |
malacology
|
2024-05-09 18:13 (UTC) |
jane
|
4.01-5 |
0 |
0.00
|
software tool for the cophylogeny reconstruction problem. https://doi.org/10.1186/1748-7188-5-16 |
malacology
|
2022-12-01 12:01 (UTC) |
jml
|
1.3.1-2 |
0 |
0.00
|
Testing hybridization using species trees https://doi.org/10.1111/j.1755-0998.2011.03065.x |
malacology
|
2022-08-28 10:37 (UTC) |
jmodeltest
|
2.1.10r20160303-7 |
1 |
0.00
|
Phylogenetic Model Averaging, more models, new heuristics and high-performance computing. https://doi.org/10.1093/molbev/msn083 |
malacology
|
2022-08-29 21:04 (UTC) |
last
|
1548-1 |
0 |
0.00
|
Genomic aligner for short reads https://doi.org/10.1093/nar/gkq010 |
malacology
|
2024-06-14 06:01 (UTC) |
legacybasic
|
1.0.2-1 |
0 |
0.00
|
BASIC interpreter for 1970s/80s BASIC games |
malacology
|
2023-10-20 10:26 (UTC) |
libmaus
|
2.0.812_release_20220919125234-3 |
1 |
0.00
|
Bioinformatics data structures and algorithms in C++ |
malacology
|
2022-10-19 16:35 (UTC) |
lilac-git
|
r1093.f627128-1 |
0 |
0.00
|
The build bot for archlinuxcn |
malacology
|
2023-06-05 04:54 (UTC) |
lvb
|
4.2-0 |
0 |
0.00
|
parsimony and simulated annealing in the search for phylogenetic trees https://doi.org/10.1093/bioinformatics/btg402 |
malacology
|
2023-07-29 12:26 (UTC) |
mafft-desktop
|
1.0-1 |
1 |
0.00
|
Desktop File For MAFFT |
malacology
|
2021-05-06 08:31 (UTC) |
mcscanx
|
2022.11.01-1 |
0 |
0.00
|
Multiple Collinearity Scan toolkit X version https://doi.org/10.1093/nar/gkr1293 |
malacology
|
2023-02-09 11:42 (UTC) |
mega
|
11.0.13-3 |
1 |
0.00
|
Molecular Evolutionary Genetics Analysis. https://doi.org/10.1093/molbev/msy096 |
malacology
|
2023-04-04 19:30 (UTC) |
megax-bin
|
10.2.6-1 |
2 |
0.10
|
Molecular Evolutionary Genetics Analysis |
malacology
|
2021-06-12 01:37 (UTC) |
mesquite
|
3.81_build955-1 |
0 |
0.00
|
A modular, extendible software for evolutionary biology, designed to help biologists organize and analyze comparative data about organisms |
malacology
|
2023-05-15 16:23 (UTC) |
mesquite-doc
|
3.81_build955-1 |
0 |
0.00
|
doc for mesquite |
malacology
|
2023-05-15 16:23 (UTC) |
mesquite-extra
|
3.81_build955-1 |
0 |
0.00
|
extra data for mesquite |
malacology
|
2023-05-15 16:23 (UTC) |
microtex-git
|
2022.12.23-1 |
2 |
0.00
|
A dynamic, cross-platform, and embeddable LaTeX rendering library |
malacology
|
2023-03-25 06:49 (UTC) |
modeltest-gui
|
0.1.7-8 |
0 |
0.00
|
A New and Scalable Tool for the Selection of DNA and Protein Evolutionary Models. https://doi.org/10.1093/molbev/msz189 |
malacology
|
2022-08-28 22:03 (UTC) |
modeltest-ng
|
0.1.7-6 |
0 |
0.00
|
A New and Scalable Tool for the Selection of DNA and Protein Evolutionary Models. https://doi.org/10.1093/molbev/msz189 |
malacology
|
2023-03-25 22:23 (UTC) |
modeltest-ng-mpi
|
0.1.7-7 |
0 |
0.00
|
A New and Scalable Tool for the Selection of DNA and Protein Evolutionary Models. https://doi.org/10.1093/molbev/msz189 |
malacology
|
2022-08-28 22:03 (UTC) |
morphoj
|
1.08.02-1 |
1 |
0.00
|
integrated program package for doing geometric morphometrics https://doi.org/10.1111/j.1755-0998.2010.02924.x |
malacology
|
2024-05-23 00:02 (UTC) |
mpboot
|
1.2-1 |
0 |
0.00
|
Fast phylogenetic maximum parsimony tree inference and bootstrap approximation https://doi.org/10.1186/s12862-018-1131-3 |
malacology
|
2023-02-14 12:03 (UTC) |
mpi-bucky
|
1.4.4-2 |
0 |
0.00
|
Bayesian Untangling of Concordance Knots https://doi.org/10.1093/bioinformatics/btq539 |
malacology
|
2022-08-29 18:58 (UTC) |
mptp
|
0.2.5-1 |
0 |
0.00
|
A tool for single-locus species delimitation https://doi.org/10.1093/bioinformatics/btx025 |
malacology
|
2023-09-13 00:01 (UTC) |
mrbayes-beagle
|
3.2.7-6 |
0 |
0.00
|
A program for the Bayesian estimation of phylogeny. https://doi.org/10.1093/sysbio/sys029 |
malacology
|
2022-04-23 18:37 (UTC) |
mrbayes-desktop
|
1.0-1 |
1 |
0.00
|
Desktop File For MrBayes |
malacology
|
2021-05-06 08:28 (UTC) |
mrbayes-mpi
|
3.2.7-8 |
2 |
0.00
|
MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models. https://doi.org/10.1093/sysbio/sys029 |
malacology
|
2022-08-02 12:01 (UTC) |
mrbayes-mpi-beagle
|
3.2.7-15 |
0 |
0.00
|
MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models. https://doi.org/10.1093/sysbio/sys029 |
malacology
|
2022-08-02 18:13 (UTC) |
mrbayes-mpi-desktop
|
1.0-1 |
1 |
0.00
|
Desktop File For MrBayes MPI |
malacology
|
2021-05-07 06:07 (UTC) |
mrmodeltest
|
2.4-1 |
0 |
0.00
|
C program for selecting DNA substitution models using PAUP* |
malacology
|
2021-12-22 20:53 (UTC) |
nona
|
2014.03.10-5 |
1 |
0.00
|
NONA: a bastard son of Pee-Wee. Phylogenetic Analysis Software |
malacology
|
2023-07-21 07:08 (UTC) |
nona-win
|
2014.03.10-0 |
0 |
0.00
|
a bastard son of Pee-Wee |
malacology
|
2023-07-29 17:57 (UTC) |
notekit
|
0.2.0-1 |
2 |
0.00
|
A GTK3 hierarchical markdown notetaking application with tablet support. |
malacology
|
2022-12-18 14:18 (UTC) |
notekit-git
|
r207.18b708d-1 |
4 |
0.00
|
A GTK3 hierarchical markdown notetaking application with tablet support. |
malacology
|
2022-06-16 12:05 (UTC) |
nudelta
|
0.7.4-1 |
0 |
0.00
|
Open source NuPhy Console alternative |
malacology
|
2023-10-11 09:38 (UTC) |
oblong
|
2014.03.10-1 |
0 |
0.00
|
A program to analyse phylogenomic data sets with millions of characters, requiring negligible amounts of RAM. https://doi.org/10.1111/cla.12056 |
malacology
|
2022-08-29 19:55 (UTC) |
open-delta
|
1:1.0.3_beta-1 |
1 |
0.00
|
DEscription Language of TAxonomy |
malacology
|
2023-04-25 19:25 (UTC) |
paml
|
4.10.7-1 |
0 |
0.00
|
Phylogenetic analysis by maximum likelihood. https://doi.org/10.1093/molbev/msm088 |
malacology
|
2023-06-29 22:48 (UTC) |
pamlx
|
1.3.1-4 |
0 |
0.00
|
A Graphical User Interface for PAML https://doi.org/10.1093/molbev/mst179 |
malacology
|
2024-02-05 17:10 (UTC) |
pars-win-extra
|
2014.03.10-0 |
0 |
0.00
|
Parsimony programs extra software from Pablo A. Goloboff |
malacology
|
2023-07-29 17:57 (UTC) |
parsimonator
|
1.0.2-2 |
0 |
0.00
|
A fast open-source parsimony program |
malacology
|
2022-08-29 02:06 (UTC) |
paup-desktop
|
1.0-1 |
1 |
0.00
|
Desktop File For PAUP* |
malacology
|
2021-05-06 08:47 (UTC) |
paup-gui
|
4.0a-1 |
0 |
0.00
|
Phylogenetic Analysis Using PAUP |
malacology
|
2021-05-11 17:00 (UTC) |
pee-wee
|
2014.03.10-0 |
0 |
0.00
|
(P)arsimony and (I)mplied (WE)ights |
malacology
|
2023-07-29 17:57 (UTC) |
phast-win
|
2014.03.10-0 |
0 |
0.00
|
PHylogenetic Analysis for Sankoff Transformations https://doi.org/10.1006/clad.1998.0068 |
malacology
|
2023-07-29 17:57 (UTC) |
phyde
|
0.9971-2 |
0 |
0.00
|
a system-independent editor for DNA and amino acid sequence alignments, designed to assist anybody interested in phylogenetic or other comparative analyses of sequence data |
malacology
|
2022-08-28 10:34 (UTC) |
phylobayes
|
4.1e-1 |
1 |
0.00
|
phylogenetic reconstruction using infinite mixtures |
malacology
|
2021-05-15 13:14 (UTC) |
phylobayes-mpi
|
1.9-1 |
1 |
0.00
|
phylogenetic reconstruction using infinite mixtures. https://doi.org/10.1093/molbev/msh112 |
malacology
|
2022-10-16 08:44 (UTC) |
phylogeography
|
1.10.4-0 |
1 |
0.00
|
BEAST PhyloGeography https://doi.org/10.1186/1471-2148-7-214 |
malacology
|
2023-05-07 11:21 (UTC) |
phylonet
|
3.8.4-3 |
0 |
0.00
|
suite of software tools for reconstructing/analyzing phylogenetic networks in the presence of reticulate evolutionary events. https://doi.org/10.1093/sysbio/syy015 |
malacology
|
2022-12-01 18:01 (UTC) |