r-basics
|
2.16.0-1 |
0 |
0.00
|
Bayesian Analysis of Single-Cell Sequencing data |
BioArchLinuxBot
|
2024-05-03 01:33 (UTC) |
r-amplican
|
1.26.0-1 |
0 |
0.00
|
Automated analysis of CRISPR experiments |
BioArchLinuxBot
|
2024-05-03 01:24 (UTC) |
r-otubase
|
1.54.0-1 |
0 |
0.00
|
Provides structure and functions for the analysis of OTU data |
BioArchLinuxBot
|
2024-05-03 01:23 (UTC) |
r-r3cseq
|
1.50.0-1 |
0 |
0.00
|
Analysis of Chromosome Conformation Capture and Next-generation Sequencing (3C-seq) |
BioArchLinuxBot
|
2024-05-03 01:05 (UTC) |
r-hitc
|
1.48.0-1 |
0 |
0.00
|
High Throughput Chromosome Conformation Capture analysis |
BioArchLinuxBot
|
2024-05-03 00:59 (UTC) |
r-methylkit
|
1.30.0-1 |
0 |
0.00
|
DNA methylation analysis from high-throughput bisulfite sequencing results |
BioArchLinuxBot
|
2024-05-03 00:57 (UTC) |
r-grohmm
|
1.38.0-1 |
0 |
0.00
|
GRO-seq Analysis Pipeline |
BioArchLinuxBot
|
2024-05-03 00:56 (UTC) |
r-syntenet
|
1.6.0-1 |
0 |
0.00
|
Inference And Analysis Of Synteny Networks |
pekkarr
|
2024-05-03 00:52 (UTC) |
r-regenrich
|
1.14.0-1 |
0 |
0.00
|
Gene regulator enrichment analysis |
BioArchLinuxBot
|
2024-05-03 00:47 (UTC) |
r-radiogx
|
2.8.0-1 |
0 |
0.00
|
Analysis of Large-Scale Radio-Genomic Data |
BioArchLinuxBot
|
2024-05-03 00:43 (UTC) |
r-pharmacogx
|
3.8.0-1 |
0 |
0.00
|
Analysis of Large-Scale Pharmacogenomic Data |
BioArchLinuxBot
|
2024-05-03 00:40 (UTC) |
r-toxicogx
|
2.8.0-1 |
0 |
0.00
|
Analysis of Large-Scale Toxico-Genomic Data |
BioArchLinuxBot
|
2024-05-03 00:39 (UTC) |
r-gsean
|
1.24.0-1 |
0 |
0.00
|
Gene Set Enrichment Analysis with Networks |
BioArchLinuxBot
|
2024-05-03 00:37 (UTC) |
r-rtnsurvival
|
1.28.0-1 |
0 |
0.00
|
Survival analysis using transcriptional networks inferred by the RTN package |
BioArchLinuxBot
|
2024-05-03 00:37 (UTC) |
r-phenomis
|
1.6.0-1 |
0 |
0.00
|
Postprocessing and univariate analysis of omics data |
pekkarr
|
2024-05-03 00:35 (UTC) |
r-lipidr
|
2.18.0-1 |
0 |
0.00
|
Data Mining and Analysis of Lipidomics Datasets |
BioArchLinuxBot
|
2024-05-03 00:32 (UTC) |
r-puma
|
3.46.0-1 |
0 |
0.00
|
Propagating Uncertainty in Microarray Analysis(including Affymetrix tranditional 3' arrays and exon arrays and Human Transcriptome Array 2.0) |
pekkarr
|
2024-05-03 00:29 (UTC) |
r-cn.farms
|
1.52.0-1 |
0 |
0.00
|
cn.FARMS - factor analysis for copy number estimation |
BioArchLinuxBot
|
2024-05-03 00:25 (UTC) |
r-coseq
|
1.28.0-1 |
0 |
0.00
|
Co-Expression Analysis of Sequencing Data |
BioArchLinuxBot
|
2024-05-03 00:16 (UTC) |
r-tscan
|
1.42.0-1 |
0 |
0.00
|
Tools for Single-Cell Analysis |
BioArchLinuxBot
|
2024-05-03 00:13 (UTC) |
r-scarray.sat
|
1.4.0-1 |
0 |
0.00
|
Large-scale single-cell RNA-seq data analysis using GDS files and Seurat |
pekkarr
|
2024-05-03 00:09 (UTC) |
r-scater
|
1.32.0-1 |
0 |
0.00
|
Single-Cell Analysis Toolkit for Gene Expression Data in R |
BioArchLinuxBot
|
2024-05-03 00:06 (UTC) |
r-scran
|
1.32.0-1 |
0 |
0.00
|
Methods for Single-Cell RNA-Seq Data Analysis |
BioArchLinuxBot
|
2024-05-03 00:05 (UTC) |
r-baalchip
|
1.30.0-1 |
0 |
0.00
|
BaalChIP: Bayesian analysis of allele-specific transcription factor binding in cancer genomes |
BioArchLinuxBot
|
2024-05-02 23:46 (UTC) |
r-mosaics
|
2.42.0-1 |
0 |
0.00
|
MOSAiCS (MOdel-based one and two Sample Analysis and Inference for ChIP-Seq) |
BioArchLinuxBot
|
2024-05-02 23:44 (UTC) |
r-chromstar
|
1.30.0-1 |
0 |
0.00
|
Combinatorial and Differential Chromatin State Analysis for ChIP-Seq Data |
BioArchLinuxBot
|
2024-05-02 23:41 (UTC) |
r-aneufinder
|
1.32.0-1 |
0 |
0.00
|
Analysis of Copy Number Variation in Single-Cell-Sequencing Data |
BioArchLinuxBot
|
2024-05-02 23:40 (UTC) |
r-blma
|
1.28.0-1 |
0 |
0.00
|
BLMA: A package for bi-level meta-analysis |
BioArchLinuxBot
|
2024-05-02 23:34 (UTC) |
r-sbgnview
|
1.18.0-1 |
0 |
0.00
|
"SBGNview: Data Analysis, Integration and Visualization on SBGN Pathways" |
BioArchLinuxBot
|
2024-05-02 23:34 (UTC) |
r-adamgui
|
1.20.0-1 |
0 |
0.00
|
Activity and Diversity Analysis Module Graphical User Interface |
BioArchLinuxBot
|
2024-05-02 23:32 (UTC) |
r-consica
|
2.2.0-1 |
0 |
0.00
|
consensus Independent Component Analysis |
pekkarr
|
2024-05-02 23:31 (UTC) |
r-moanin
|
1.12.0-1 |
0 |
0.00
|
An R Package for Time Course RNASeq Data Analysis |
BioArchLinuxBot
|
2024-05-02 23:29 (UTC) |
r-transcriptogramer
|
1.26.0-1 |
0 |
0.00
|
Transcriptional analysis based on transcriptograms |
BioArchLinuxBot
|
2024-05-02 23:26 (UTC) |
r-bgeedb
|
2.30.0-1 |
0 |
0.00
|
Annotation and gene expression data retrieval from Bgee database. TopAnat, an anatomical entities Enrichment Analysis tool for UBERON ontology |
BioArchLinuxBot
|
2024-05-02 23:25 (UTC) |
r-dose
|
3.30.0-1 |
0 |
0.00
|
Disease Ontology Semantic and Enrichment analysis |
BioArchLinuxBot
|
2024-05-02 23:22 (UTC) |
r-opossom
|
2.22.0-1 |
0 |
0.00
|
Comprehensive analysis of transcriptome data |
BioArchLinuxBot
|
2024-05-02 23:17 (UTC) |
r-seq2pathway
|
1.36.0-1 |
0 |
0.00
|
a novel tool for functional gene-set (or termed as pathway) analysis of next-generation sequencing data |
BioArchLinuxBot
|
2024-05-02 23:16 (UTC) |
r-lace
|
2.8.0-1 |
0 |
0.00
|
Longitudinal Analysis of Cancer Evolution (LACE) |
BioArchLinuxBot
|
2024-05-02 23:12 (UTC) |
r-proteomm
|
1.22.0-1 |
0 |
0.00
|
Multi-Dataset Model-based Differential Expression Proteomics Analysis Platform |
BioArchLinuxBot
|
2024-05-02 23:10 (UTC) |
r-chronos
|
1.32.0-1 |
0 |
0.00
|
CHRONOS: A time-varying method for microRNA-mediated sub-pathway enrichment analysis |
BioArchLinuxBot
|
2024-05-02 23:09 (UTC) |
r-intercellar
|
2.10.0-1 |
0 |
0.00
|
InterCellar: an R-Shiny app for interactive analysis and exploration of cell-cell communication in single-cell transcriptomics |
BioArchLinuxBot
|
2024-05-02 23:08 (UTC) |
r-seqgsea
|
1.44.0-1 |
0 |
0.00
|
Gene Set Enrichment Analysis (GSEA) of RNA-Seq Data: integrating differential expression and splicing |
BioArchLinuxBot
|
2024-05-02 23:07 (UTC) |
r-isobar
|
1.50.0-1 |
0 |
0.00
|
Analysis and quantitation of isobarically tagged MSMS proteomics data |
BioArchLinuxBot
|
2024-05-02 23:03 (UTC) |
r-cytofpower
|
1.10.0-1 |
0 |
0.00
|
Power analysis for CyTOF experiments |
BioArchLinuxBot
|
2024-05-02 23:01 (UTC) |
r-censcyt
|
1.12.0-1 |
0 |
0.00
|
Differential abundance analysis with a right censored covariate in high-dimensional cytometry |
BioArchLinuxBot
|
2024-05-02 23:00 (UTC) |
r-omicade4
|
1.44.0-1 |
0 |
0.00
|
Multiple co-inertia analysis of omics datasets |
BioArchLinuxBot
|
2024-05-02 22:51 (UTC) |
r-rtnduals
|
1.28.0-1 |
0 |
0.00
|
Analysis of co-regulation and inference of 'dual regulons' |
BioArchLinuxBot
|
2024-05-02 22:50 (UTC) |
r-ropls
|
1.36.0-1 |
0 |
0.00
|
PCA, PLS(-DA) and OPLS(-DA) for multivariate analysis and feature selection of omics data |
BioArchLinuxBot
|
2024-05-02 22:47 (UTC) |
r-crlmm
|
1.62.0-1 |
0 |
0.00
|
Genotype Calling (CRLMM) and Copy Number Analysis tool for Affymetrix SNP 5.0 and 6.0 and Illumina arrays |
BioArchLinuxBot
|
2024-05-02 22:43 (UTC) |
r-hiccompare
|
1.26.0-1 |
0 |
0.00
|
HiCcompare: Joint normalization and comparative analysis of multiple Hi-C datasets |
BioArchLinuxBot
|
2024-05-02 22:41 (UTC) |