366 packages found. Page 5 of 8.

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Name Version Votes Popularity? Description Maintainer Last Updated
r-dtangle 2.0.9-7 0 0.00 Cell Type Deconvolution from Gene Expressions BioArchLinuxBot 2024-04-12 12:09 (UTC)
r-dropletutils 1.24.0-1 0 0.00 Utilities for Handling Single-Cell Droplet Data BioArchLinuxBot 2024-05-03 00:07 (UTC)
r-drimpute 1.0-4 0 0.00 Imputing Dropout Events in Single-Cell RNA-Sequencing Data BioArchLinuxBot 2022-06-06 00:34 (UTC)
r-dreamlet 1.2.0-1 0 0.00 Scalable differential expression analysis of single cell transcriptomics datasets with complex study designs pekkarr 2024-05-03 14:42 (UTC)
r-dittoseq 1.16.0-1 0 0.00 User Friendly Single-Cell and Bulk RNA Sequencing Visualization BioArchLinuxBot 2024-05-02 21:19 (UTC)
r-dino 1.10.0-1 0 0.00 Normalization of Single-Cell mRNA Sequencing Data BioArchLinuxBot 2024-05-03 01:36 (UTC)
r-diggit 1.36.0-1 0 0.00 Inference of Genetic Variants Driving Cellular Phenotypes BioArchLinuxBot 2024-05-01 23:58 (UTC)
r-desingle 1.24.0-1 0 0.00 DEsingle for detecting three types of differential expression in single-cell RNA-seq data BioArchLinuxBot 2024-05-01 19:48 (UTC)
r-demuxsnp 1.2.0-1 0 0.00 scRNAseq demultiplexing using cell hashing and SNPs pekkarr 2024-05-06 12:17 (UTC)
r-demixt 1.20.0-1 0 0.00 Cell type-specific deconvolution of heterogeneous tumor samples with two or three components using expression data from RNAseq or microarray platforms BioArchLinuxBot 2024-05-03 13:57 (UTC)
r-decontx 1.2.0-1 0 0.00 Decontamination of single cell genomics data pekkarr 2024-05-03 03:58 (UTC)
r-cytofqc 1.4.0-1 0 0.00 Labels normalized cells for CyTOF data and assigns probabilities for each label pekkarr 2024-05-03 04:00 (UTC)
r-cytodx 1.24.0-1 0 0.00 Robust prediction of clinical outcomes using cytometry data without cell gating BioArchLinuxBot 2024-05-01 23:40 (UTC)
r-cyanofilter 1.12.0-1 0 0.00 Phytoplankton Population Identification using Cell Pigmentation and/or Complexity BioArchLinuxBot 2024-05-01 23:12 (UTC)
r-ctsv 1.6.0-1 0 0.00 Identification of cell-type-specific spatially variable genes accounting for excess zeros pekkarr 2024-05-03 09:05 (UTC)
r-crimage 1.52.0-1 0 0.00 CRImage a package to classify cells and calculate tumour cellularity BioArchLinuxBot 2024-05-01 22:59 (UTC)
r-corral 1.14.0-1 0 0.00 Correspondence Analysis for Single Cell Data BioArchLinuxBot 2024-05-02 22:24 (UTC)
r-confess 1.32.0-1 0 0.00 Cell OrderiNg by FluorEScence Signal BioArchLinuxBot 2024-05-02 01:05 (UTC)
r-compass 1.42.0-1 0 0.00 Combinatorial Polyfunctionality Analysis of Single Cells BioArchLinuxBot 2024-05-01 23:31 (UTC)
r-compartmap 1.20.0-1 0 0.00 Higher-order chromatin domain inference in single cells from scRNA-seq and scATAC-seq BioArchLinuxBot 2024-04-13 18:04 (UTC)
r-cnorode 1.46.0-1 0 0.00 ODE add-on to CellNOptR BioArchLinuxBot 2024-05-01 23:52 (UTC)
r-cnorfuzzy 1.46.0-1 0 0.00 Addon to CellNOptR: Fuzzy Logic BioArchLinuxBot 2024-05-01 23:54 (UTC)
r-cnorfeeder 1.44.0-1 0 0.00 Integration of CellNOptR to add missing links BioArchLinuxBot 2024-05-01 23:53 (UTC)
r-cnordt 1.46.0-1 0 0.00 Add-on to CellNOptR: Discretized time treatments BioArchLinuxBot 2024-05-01 23:55 (UTC)
r-clustifyr 1.14.0-1 0 0.00 Classifier for Single-cell RNA-seq Using Cell Clusters BioArchLinuxBot 2023-10-27 08:10 (UTC)
r-clusterexperiment 2.24.0-1 0 0.00 Compare Clusterings for Single-Cell Sequencing BioArchLinuxBot 2024-05-03 18:21 (UTC)
r-clonotyper 1.34.0-4 0 0.00 High throughput analysis of T cell antigen receptor sequences BioArchLinuxBot 2022-11-04 06:01 (UTC)
r-cicero 1.22.0-1 0 0.00 Precict cis-co-accessibility from single-cell chromatin accessibility data BioArchLinuxBot 2024-05-03 06:18 (UTC)
r-chromscape 1.14.0-1 0 0.00 Analysis of single-cell epigenomics datasets with a Shiny App BioArchLinuxBot 2024-05-03 02:00 (UTC)
r-chetah 1.20.0-1 0 0.00 Fast and accurate scRNA-seq cell type identification BioArchLinuxBot 2024-05-02 21:54 (UTC)
r-cfdnakit 1.2.0-1 0 0.00 Fragmen-length analysis package from high-throughput sequencing of cell-free DNA (cfDNA) pekkarr 2024-05-02 21:16 (UTC)
r-cellxgenedp 1.6.2-1 0 0.00 Discover and Access Single Cell Data Sets in the cellxgene Data Portal pekkarr 2024-04-04 12:03 (UTC)
r-celltree 1.27.0-4 0 0.00 Inference and visualisation of Single-Cell RNA-seq data as a hierarchical tree structure BioArchLinuxBot 2023-04-29 05:11 (UTC)
r-celltrails 1.22.0-1 0 0.00 Reconstruction, visualization and analysis of branching trajectories BioArchLinuxBot 2024-05-02 21:34 (UTC)
r-cellscore 1.24.0-1 0 0.00 Tool for Evaluation of Cell Identity from Transcription Profiles BioArchLinuxBot 2024-05-02 19:46 (UTC)
r-cellscape 1.28.0-1 0 0.00 Explores single cell copy number profiles in the context of a single cell tree BioArchLinuxBot 2024-05-02 04:57 (UTC)
r-cellranger 1.1.0-7 1 0.00 Translate Spreadsheet Cell Ranges to Rows and Columns BioArchLinuxBot 2022-10-18 12:51 (UTC)
r-cellnoptr 1.50.0-1 0 0.00 Training of boolean logic models of signalling networks using prior knowledge networks and perturbation data BioArchLinuxBot 2024-05-01 21:19 (UTC)
r-cellmixs 1.20.0-1 0 0.00 Evaluate Cellspecific Mixing BioArchLinuxBot 2024-05-03 01:43 (UTC)
r-cellmigration 1.12.0-1 0 0.00 Track Cells, Analyze Cell Trajectories and Compute Migration Statistics BioArchLinuxBot 2024-05-01 23:38 (UTC)
r-cellmapper 1.30.0-1 0 0.00 Predict genes expressed selectively in specific cell types BioArchLinuxBot 2024-05-01 18:05 (UTC)
r-cellity 1.32.0-1 0 0.00 Quality Control for Single-Cell RNA-seq Data BioArchLinuxBot 2024-05-02 23:26 (UTC)
r-cellid 1.12.0-1 0 0.00 Unbiased Extraction of Single Cell gene signatures using Multiple Correspondence Analysis BioArchLinuxBot 2024-05-03 01:49 (UTC)
r-cellhts2 2.68.0-1 0 0.00 Analysis of cell-based screens - revised version of cellHTS BioArchLinuxBot 2024-05-02 02:58 (UTC)
r-celldex 1.14.0-1 0 0.00 Index of Reference Cell Type Datasets BioArchLinuxBot 2024-05-04 18:37 (UTC)
r-cellbench 1.20.0-1 0 0.00 Construct Benchmarks for Single Cell Analysis Methods BioArchLinuxBot 2024-05-02 21:31 (UTC)
r-cellbaser 1.28.0-1 0 0.00 Querying annotation data from the high performance Cellbase web BioArchLinuxBot 2024-05-02 00:32 (UTC)
r-cellbarcode 1.8.1-1 0 0.00 Cellular DNA Barcode Analysis toolkit BioArchLinuxBot 2024-02-22 06:02 (UTC)
r-cellarepertorium 1.12.0-1 0 0.00 Data structures, clustering and testing for single cell immune receptor repertoires (scRNAseq RepSeq/AIRR-seq) BioArchLinuxBot 2023-10-26 02:47 (UTC)
r-celda 1.20.0-1 0 0.00 CEllular Latent Dirichlet Allocation BioArchLinuxBot 2024-05-03 01:52 (UTC)

366 packages found. Page 5 of 8.

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