r-tripr
|
1.10.0-1 |
0 |
0.00
|
T-cell Receptor/Immunoglobulin Profiler (TRIP) |
BioArchLinuxBot
|
2024-05-01 20:59 (UTC) |
r-tricycle
|
1.12.0-1 |
0 |
0.00
|
tricycle: Transferable Representation and Inference of cell cycle |
BioArchLinuxBot
|
2024-05-03 08:39 (UTC) |
r-treekor
|
1.12.0-1 |
0 |
0.00
|
Cytometry Cluster Hierarchy and Cellular-to-phenotype Associations |
BioArchLinuxBot
|
2024-05-02 23:02 (UTC) |
r-trajectoryutils
|
1.12.0-1 |
0 |
0.00
|
Single-Cell Trajectory Analysis Utilities |
BioArchLinuxBot
|
2024-05-02 21:26 (UTC) |
r-tidysinglecellexperiment
|
1.14.0-1 |
0 |
0.00
|
Brings SingleCellExperiment to the Tidyverse |
BioArchLinuxBot
|
2024-05-03 08:15 (UTC) |
r-switchde
|
1.30.0-1 |
0 |
0.00
|
Switch-like differential expression across single-cell trajectories |
BioArchLinuxBot
|
2024-05-03 07:43 (UTC) |
r-svmisc
|
1.2.3-9 |
0 |
0.00
|
'SciViews' - Miscellaneous Functions |
BioArchLinuxBot
|
2024-02-29 18:05 (UTC) |
r-survmisc
|
0.5.6-3 |
0 |
0.00
|
Miscellaneous Functions for Survival Data |
BioArchLinuxBot
|
2022-06-06 17:03 (UTC) |
r-subcellbarcode
|
1.20.0-1 |
0 |
0.00
|
SubCellBarCode: Integrated workflow for robust mapping and visualizing whole human spatial proteome |
BioArchLinuxBot
|
2024-05-03 08:42 (UTC) |
r-stemhypoxia
|
1.40.0-1 |
0 |
0.00
|
Differentiation of Human Embryonic Stem Cells under Hypoxia gene expression dataset by Prado-Lopez et al. (2010) |
BioArchLinuxBot
|
2024-05-04 00:32 (UTC) |
r-stdeconvolve
|
1.8.0-1 |
0 |
0.00
|
Reference-free Cell-Type Deconvolution of Multi-Cellular Spatially Resolved Transcriptomics Data |
pekkarr
|
2024-05-02 05:21 (UTC) |
r-statial
|
1.6.0-1 |
0 |
0.00
|
A package to identify changes in cell state relative to spatial associations |
pekkarr
|
2024-05-03 08:57 (UTC) |
r-spsimseq
|
1.14.0-1 |
0 |
0.00
|
Semi-parametric simulation tool for bulk and single-cell RNA sequencing data |
BioArchLinuxBot
|
2024-05-03 08:47 (UTC) |
r-splatter
|
1.28.0-1 |
0 |
0.00
|
Simple Simulation of Single-cell RNA Sequencing Data |
BioArchLinuxBot
|
2024-05-03 07:48 (UTC) |
r-spiky
|
1.10.0-1 |
0 |
0.00
|
Spike-in calibration for cell-free MeDIP |
BioArchLinuxBot
|
2024-05-03 08:19 (UTC) |
r-speckle
|
1.2.0-1 |
0 |
0.00
|
Statistical methods for analysing single cell RNA-seq data |
pekkarr
|
2023-11-14 17:41 (UTC) |
r-spatialdecon
|
1.14.0-1 |
0 |
0.00
|
Deconvolution of mixed cells from spatial and/or bulk gene expression data |
BioArchLinuxBot
|
2024-05-03 08:38 (UTC) |
r-soupx
|
1.6.2-1 |
0 |
0.00
|
Single Cell mRNA Soup eXterminator |
BioArchLinuxBot
|
2022-11-01 18:05 (UTC) |
r-slingshot
|
2.12.0-1 |
0 |
0.00
|
Tools for ordering single-cell sequencing |
BioArchLinuxBot
|
2024-05-03 00:14 (UTC) |
r-slalom
|
1.26.0-1 |
0 |
0.00
|
Factorial Latent Variable Modeling of Single-Cell RNA-Seq Data |
BioArchLinuxBot
|
2024-05-03 12:22 (UTC) |
r-sipsic
|
1.4.0-1 |
0 |
0.00
|
Calculate Pathway Scores for Each Cell in scRNA-Seq Data |
pekkarr
|
2024-05-02 21:50 (UTC) |
r-singler
|
2.6.0-1 |
0 |
0.00
|
Reference-Based Single-Cell RNA-Seq Annotation |
BioArchLinuxBot
|
2024-05-02 19:56 (UTC) |
r-singlecelltk
|
2.14.0-1 |
0 |
0.00
|
Comprehensive and Interactive Analysis of Single Cell RNA-Seq Data |
BioArchLinuxBot
|
2024-05-04 18:42 (UTC) |
r-singlecellsignalr
|
1.16.0-1 |
0 |
0.00
|
Cell Signalling Using Single Cell RNAseq Data Analysis |
BioArchLinuxBot
|
2024-05-03 01:37 (UTC) |
r-singlecellexperiment
|
1.26.0-1 |
0 |
0.00
|
S4 Classes for Single Cell Data |
BioArchLinuxBot
|
2024-05-02 19:00 (UTC) |
r-sincell
|
1.36.0-1 |
0 |
0.00
|
R package for the statistical assessment of cell state hierarchies from single-cell RNA-seq data |
BioArchLinuxBot
|
2024-05-01 21:24 (UTC) |
r-simpleseg
|
1.4.1-2 |
0 |
0.00
|
A package to perform simple cell segmentation |
pekkarr
|
2024-04-28 17:50 (UTC) |
r-simlr
|
1.30.0-1 |
0 |
0.00
|
Single-cell Interpretation via Multi-kernel LeaRning (SIMLR) |
BioArchLinuxBot
|
2024-05-01 19:06 (UTC) |
r-seuratobject
|
5.0.1-1 |
0 |
0.00
|
Data Structures for Single Cell Data |
BioArchLinuxBot
|
2024-03-01 00:01 (UTC) |
r-seurat
|
5.0.3-1 |
0 |
0.00
|
Tools for Single Cell Genomics |
BioArchLinuxBot
|
2024-03-19 12:04 (UTC) |
r-seqcat
|
1.26.0-1 |
0 |
0.00
|
High Throughput Sequencing Cell Authentication Toolkit |
BioArchLinuxBot
|
2024-05-03 04:49 (UTC) |
r-sdams
|
1.24.0-1 |
0 |
0.00
|
Differential Abundant/Expression Analysis for Metabolomics, Proteomics and single-cell RNA sequencing Data |
BioArchLinuxBot
|
2024-05-02 19:09 (UTC) |
r-scuttle
|
1.14.0-1 |
0 |
0.00
|
Single-Cell RNA-Seq Analysis Utilities |
BioArchLinuxBot
|
2024-05-02 21:18 (UTC) |
r-sctreeviz
|
1.10.0-1 |
0 |
0.00
|
R/Bioconductor package to interactively explore and visualize single cell RNA-seq datasets with hierarhical annotations |
BioArchLinuxBot
|
2024-05-03 14:45 (UTC) |
r-sctransform
|
0.4.1-1 |
0 |
0.00
|
Variance Stabilizing Transformations for Single Cell UMI Data |
BioArchLinuxBot
|
2023-10-19 06:01 (UTC) |
r-scthi
|
1.16.0-1 |
0 |
0.00
|
Indentification of significantly activated ligand-receptor interactions across clusters of cells from single-cell RNA sequencing data |
BioArchLinuxBot
|
2024-05-01 19:49 (UTC) |
r-sctgif
|
1.18.0-1 |
0 |
0.00
|
Cell type annotation for unannotated single-cell RNA-Seq data |
BioArchLinuxBot
|
2024-05-03 12:53 (UTC) |
r-sctensor
|
2.14.0-1 |
0 |
0.00
|
Detection of cell-cell interaction from single-cell RNA-seq dataset by tensor decomposition |
BioArchLinuxBot
|
2024-05-03 14:38 (UTC) |
r-scshapes
|
1.10.0-1 |
0 |
0.00
|
A Statistical Framework for Modeling and Identifying Differential Distributions in Single-cell RNA-sequencing Data |
BioArchLinuxBot
|
2024-05-01 19:50 (UTC) |
r-scruff
|
1.22.0-1 |
0 |
0.00
|
Single Cell RNA-Seq UMI Filtering Facilitator (scruff) |
BioArchLinuxBot
|
2024-05-03 13:32 (UTC) |
r-scrnaseqapp
|
1.4.0-1 |
0 |
0.00
|
A single-cell RNAseq Shiny app-package |
pekkarr
|
2024-05-05 12:17 (UTC) |
r-scrnaseq
|
2.18.0-1 |
0 |
0.00
|
Collection of Public Single-Cell RNA-Seq Datasets |
BioArchLinuxBot
|
2024-05-04 18:38 (UTC) |
r-screpertoire
|
2.0.0-1 |
0 |
0.00
|
A toolkit for single-cell immune receptor profiling |
BioArchLinuxBot
|
2024-05-05 12:20 (UTC) |
r-screcover
|
1.20.0-1 |
0 |
0.00
|
scRecover for imputation of single-cell RNA-seq data |
BioArchLinuxBot
|
2024-05-01 23:51 (UTC) |
r-screclassify
|
1.10.0-1 |
0 |
0.00
|
scReClassify: post hoc cell type classification of single-cell RNA-seq data |
BioArchLinuxBot
|
2024-05-02 21:28 (UTC) |
r-scran
|
1.32.0-1 |
0 |
0.00
|
Methods for Single-Cell RNA-Seq Data Analysis |
BioArchLinuxBot
|
2024-05-03 00:05 (UTC) |
r-scpipe
|
2.4.0-1 |
0 |
0.00
|
pipeline for single cell RNA-seq data analysis |
BioArchLinuxBot
|
2024-05-03 01:58 (UTC) |
r-scp
|
1.14.0-1 |
0 |
0.00
|
Mass Spectrometry-Based Single-Cell Proteomics Data Analysis |
BioArchLinuxBot
|
2024-05-05 12:19 (UTC) |
r-scope
|
1.16.0-1 |
0 |
0.00
|
A normalization and copy number estimation method for single-cell DNA sequencing |
BioArchLinuxBot
|
2024-05-03 03:23 (UTC) |
r-scone
|
1.28.0-1 |
0 |
0.00
|
Single Cell Overview of Normalized Expression data |
BioArchLinuxBot
|
2024-05-03 05:30 (UTC) |