366 packages found. Page 2 of 8.

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Name Version Votes Popularity? Description Maintainer Last Updated
r-tripr 1.10.0-1 0 0.00 T-cell Receptor/Immunoglobulin Profiler (TRIP) BioArchLinuxBot 2024-05-01 20:59 (UTC)
r-tricycle 1.12.0-1 0 0.00 tricycle: Transferable Representation and Inference of cell cycle BioArchLinuxBot 2024-05-03 08:39 (UTC)
r-treekor 1.12.0-1 0 0.00 Cytometry Cluster Hierarchy and Cellular-to-phenotype Associations BioArchLinuxBot 2024-05-02 23:02 (UTC)
r-trajectoryutils 1.12.0-1 0 0.00 Single-Cell Trajectory Analysis Utilities BioArchLinuxBot 2024-05-02 21:26 (UTC)
r-tidysinglecellexperiment 1.14.0-1 0 0.00 Brings SingleCellExperiment to the Tidyverse BioArchLinuxBot 2024-05-03 08:15 (UTC)
r-switchde 1.30.0-1 0 0.00 Switch-like differential expression across single-cell trajectories BioArchLinuxBot 2024-05-03 07:43 (UTC)
r-svmisc 1.2.3-9 0 0.00 'SciViews' - Miscellaneous Functions BioArchLinuxBot 2024-02-29 18:05 (UTC)
r-survmisc 0.5.6-3 0 0.00 Miscellaneous Functions for Survival Data BioArchLinuxBot 2022-06-06 17:03 (UTC)
r-subcellbarcode 1.20.0-1 0 0.00 SubCellBarCode: Integrated workflow for robust mapping and visualizing whole human spatial proteome BioArchLinuxBot 2024-05-03 08:42 (UTC)
r-stemhypoxia 1.40.0-1 0 0.00 Differentiation of Human Embryonic Stem Cells under Hypoxia gene expression dataset by Prado-Lopez et al. (2010) BioArchLinuxBot 2024-05-04 00:32 (UTC)
r-stdeconvolve 1.8.0-1 0 0.00 Reference-free Cell-Type Deconvolution of Multi-Cellular Spatially Resolved Transcriptomics Data pekkarr 2024-05-02 05:21 (UTC)
r-statial 1.6.0-1 0 0.00 A package to identify changes in cell state relative to spatial associations pekkarr 2024-05-03 08:57 (UTC)
r-spsimseq 1.14.0-1 0 0.00 Semi-parametric simulation tool for bulk and single-cell RNA sequencing data BioArchLinuxBot 2024-05-03 08:47 (UTC)
r-splatter 1.28.0-1 0 0.00 Simple Simulation of Single-cell RNA Sequencing Data BioArchLinuxBot 2024-05-03 07:48 (UTC)
r-spiky 1.10.0-1 0 0.00 Spike-in calibration for cell-free MeDIP BioArchLinuxBot 2024-05-03 08:19 (UTC)
r-speckle 1.2.0-1 0 0.00 Statistical methods for analysing single cell RNA-seq data pekkarr 2023-11-14 17:41 (UTC)
r-spatialdecon 1.14.0-1 0 0.00 Deconvolution of mixed cells from spatial and/or bulk gene expression data BioArchLinuxBot 2024-05-03 08:38 (UTC)
r-soupx 1.6.2-1 0 0.00 Single Cell mRNA Soup eXterminator BioArchLinuxBot 2022-11-01 18:05 (UTC)
r-slingshot 2.12.0-1 0 0.00 Tools for ordering single-cell sequencing BioArchLinuxBot 2024-05-03 00:14 (UTC)
r-slalom 1.26.0-1 0 0.00 Factorial Latent Variable Modeling of Single-Cell RNA-Seq Data BioArchLinuxBot 2024-05-03 12:22 (UTC)
r-sipsic 1.4.0-1 0 0.00 Calculate Pathway Scores for Each Cell in scRNA-Seq Data pekkarr 2024-05-02 21:50 (UTC)
r-singler 2.6.0-1 0 0.00 Reference-Based Single-Cell RNA-Seq Annotation BioArchLinuxBot 2024-05-02 19:56 (UTC)
r-singlecelltk 2.14.0-1 0 0.00 Comprehensive and Interactive Analysis of Single Cell RNA-Seq Data BioArchLinuxBot 2024-05-04 18:42 (UTC)
r-singlecellsignalr 1.16.0-1 0 0.00 Cell Signalling Using Single Cell RNAseq Data Analysis BioArchLinuxBot 2024-05-03 01:37 (UTC)
r-singlecellexperiment 1.26.0-1 0 0.00 S4 Classes for Single Cell Data BioArchLinuxBot 2024-05-02 19:00 (UTC)
r-sincell 1.36.0-1 0 0.00 R package for the statistical assessment of cell state hierarchies from single-cell RNA-seq data BioArchLinuxBot 2024-05-01 21:24 (UTC)
r-simpleseg 1.4.1-2 0 0.00 A package to perform simple cell segmentation pekkarr 2024-04-28 17:50 (UTC)
r-simlr 1.30.0-1 0 0.00 Single-cell Interpretation via Multi-kernel LeaRning (SIMLR) BioArchLinuxBot 2024-05-01 19:06 (UTC)
r-seuratobject 5.0.1-1 0 0.00 Data Structures for Single Cell Data BioArchLinuxBot 2024-03-01 00:01 (UTC)
r-seurat 5.0.3-1 0 0.00 Tools for Single Cell Genomics BioArchLinuxBot 2024-03-19 12:04 (UTC)
r-seqcat 1.26.0-1 0 0.00 High Throughput Sequencing Cell Authentication Toolkit BioArchLinuxBot 2024-05-03 04:49 (UTC)
r-sdams 1.24.0-1 0 0.00 Differential Abundant/Expression Analysis for Metabolomics, Proteomics and single-cell RNA sequencing Data BioArchLinuxBot 2024-05-02 19:09 (UTC)
r-scuttle 1.14.0-1 0 0.00 Single-Cell RNA-Seq Analysis Utilities BioArchLinuxBot 2024-05-02 21:18 (UTC)
r-sctreeviz 1.10.0-1 0 0.00 R/Bioconductor package to interactively explore and visualize single cell RNA-seq datasets with hierarhical annotations BioArchLinuxBot 2024-05-03 14:45 (UTC)
r-sctransform 0.4.1-1 0 0.00 Variance Stabilizing Transformations for Single Cell UMI Data BioArchLinuxBot 2023-10-19 06:01 (UTC)
r-scthi 1.16.0-1 0 0.00 Indentification of significantly activated ligand-receptor interactions across clusters of cells from single-cell RNA sequencing data BioArchLinuxBot 2024-05-01 19:49 (UTC)
r-sctgif 1.18.0-1 0 0.00 Cell type annotation for unannotated single-cell RNA-Seq data BioArchLinuxBot 2024-05-03 12:53 (UTC)
r-sctensor 2.14.0-1 0 0.00 Detection of cell-cell interaction from single-cell RNA-seq dataset by tensor decomposition BioArchLinuxBot 2024-05-03 14:38 (UTC)
r-scshapes 1.10.0-1 0 0.00 A Statistical Framework for Modeling and Identifying Differential Distributions in Single-cell RNA-sequencing Data BioArchLinuxBot 2024-05-01 19:50 (UTC)
r-scruff 1.22.0-1 0 0.00 Single Cell RNA-Seq UMI Filtering Facilitator (scruff) BioArchLinuxBot 2024-05-03 13:32 (UTC)
r-scrnaseqapp 1.4.0-1 0 0.00 A single-cell RNAseq Shiny app-package pekkarr 2024-05-05 12:17 (UTC)
r-scrnaseq 2.18.0-1 0 0.00 Collection of Public Single-Cell RNA-Seq Datasets BioArchLinuxBot 2024-05-04 18:38 (UTC)
r-screpertoire 2.0.0-1 0 0.00 A toolkit for single-cell immune receptor profiling BioArchLinuxBot 2024-05-05 12:20 (UTC)
r-screcover 1.20.0-1 0 0.00 scRecover for imputation of single-cell RNA-seq data BioArchLinuxBot 2024-05-01 23:51 (UTC)
r-screclassify 1.10.0-1 0 0.00 scReClassify: post hoc cell type classification of single-cell RNA-seq data BioArchLinuxBot 2024-05-02 21:28 (UTC)
r-scran 1.32.0-1 0 0.00 Methods for Single-Cell RNA-Seq Data Analysis BioArchLinuxBot 2024-05-03 00:05 (UTC)
r-scpipe 2.4.0-1 0 0.00 pipeline for single cell RNA-seq data analysis BioArchLinuxBot 2024-05-03 01:58 (UTC)
r-scp 1.14.0-1 0 0.00 Mass Spectrometry-Based Single-Cell Proteomics Data Analysis BioArchLinuxBot 2024-05-05 12:19 (UTC)
r-scope 1.16.0-1 0 0.00 A normalization and copy number estimation method for single-cell DNA sequencing BioArchLinuxBot 2024-05-03 03:23 (UTC)
r-scone 1.28.0-1 0 0.00 Single Cell Overview of Normalized Expression data BioArchLinuxBot 2024-05-03 05:30 (UTC)

366 packages found. Page 2 of 8.

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