742 packages found. Page 2 of 15.

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Name Version Votes Popularity? Description Maintainer Last Updated
r-stemhypoxia 1.40.0-1 0 0.00 Differentiation of Human Embryonic Stem Cells under Hypoxia gene expression dataset by Prado-Lopez et al. (2010) BioArchLinuxBot 2024-05-04 00:32 (UTC)
r-hsmmsinglecell 1.24.0-1 0 0.00 Single-cell RNA-Seq for differentiating human skeletal muscle myoblasts (HSMM) BioArchLinuxBot 2024-05-04 00:25 (UTC)
r-agimicrorna 2.54.0-1 0 0.00 Processing and Differential Expression Analysis of Agilent microRNA chips BioArchLinuxBot 2024-05-03 19:06 (UTC)
r-iseede 1.2.0-1 0 0.00 iSEE extension for panels related to differential expression analysis pekkarr 2024-05-03 18:46 (UTC)
python-phiflow 2.5.3-1 0 0.00 Differentiable PDE solving framework for machine learning carlosal1015 2024-05-03 18:42 (UTC)
kicad-pcb-diff 2.5.4-1 0 0.00 Tool to generate a PDF file showing the changes between two KiCad PCB/SCH files. Also a git plug-in. taotieren 2024-05-03 18:01 (UTC)
r-methylgsa 1.22.0-1 0 0.00 Gene Set Analysis Using the Outcome of Differential Methylation BioArchLinuxBot 2024-05-03 15:13 (UTC)
r-blacksheepr 1.18.0-1 0 0.00 Outlier Analysis for pairwise differential comparison BioArchLinuxBot 2024-05-03 14:58 (UTC)
r-dreamlet 1.2.0-1 0 0.00 Scalable differential expression analysis of single cell transcriptomics datasets with complex study designs pekkarr 2024-05-03 14:42 (UTC)
r-comethdmr 1.8.0-1 0 0.00 Accurate identification of co-methylated and differentially methylated regions in epigenome-wide association studies pekkarr 2024-05-03 14:25 (UTC)
r-debrowser 1.32.0-1 0 0.00 Interactive Differential Expresion Analysis Browser BioArchLinuxBot 2024-05-03 13:56 (UTC)
r-ballgown 2.36.0-1 0 0.00 Flexible, isoform-level differential expression analysis BioArchLinuxBot 2024-05-03 13:50 (UTC)
r-diffutr 1.12.0-1 0 0.00 diffUTR: Streamlining differential exon and 3' UTR usage BioArchLinuxBot 2024-05-03 13:46 (UTC)
r-genomicozone 1.18.0-1 0 0.00 Delineate outstanding genomic zones of differential gene activity BioArchLinuxBot 2024-05-03 13:26 (UTC)
r-zenith 1.6.0-1 0 0.00 Gene set analysis following differential expression using linear (mixed) modeling with dream pekkarr 2024-05-03 13:15 (UTC)
r-dexseq 1.50.0-1 0 0.00 Inference of differential exon usage in RNA-Seq BioArchLinuxBot 2024-05-03 13:01 (UTC)
r-classifyr 3.8.0-1 0 0.00 A framework for cross-validated classification problems, with applications to differential variability and differential distribution testing BioArchLinuxBot 2024-05-03 12:58 (UTC)
r-descan2 1.24.0-1 0 0.00 Differential Enrichment Scan 2 BioArchLinuxBot 2024-05-03 12:33 (UTC)
r-splinetimer 1.32.0-1 0 0.00 Time-course differential gene expression data analysis using spline regression models followed by gene association network reconstruction BioArchLinuxBot 2024-05-03 12:28 (UTC)
r-organismdbi 1.46.0-1 0 0.00 Software to enable the smooth interfacing of different database packages BioArchLinuxBot 2024-05-03 12:08 (UTC)
python-glyphsets 1.0.0-1 0 0.00 an API with data about glyph sets for many different scripts and languages alerque 2024-05-03 09:59 (UTC)
r-diffbind 3.14.0-1 0 0.00 Differential Binding Analysis of ChIP-Seq Peak Data BioArchLinuxBot 2024-05-03 09:19 (UTC)
ttf-delugia-code 2404.23-1 3 0.00 Cascadia Code + Nerd Fonts, with some small differences. second2050 2024-05-03 09:07 (UTC)
r-sictools 1.34.0-1 0 0.00 Find SNV/Indel differences between two bam files with near relationship BioArchLinuxBot 2024-05-03 08:44 (UTC)
r-srnadiff 1.24.0-1 0 0.00 Finding differentially expressed unannotated genomic regions from RNA-seq data BioArchLinuxBot 2024-05-03 08:36 (UTC)
r-tradeseq 1.18.0-1 0 0.00 trajectory-based differential expression analysis for sequencing data BioArchLinuxBot 2024-05-03 08:30 (UTC)
r-derfinder 1.38.0-1 0 0.00 Annotation-agnostic differential expression analysis of RNA-seq data at base-pair resolution via the DER Finder approach BioArchLinuxBot 2024-05-03 08:18 (UTC)
r-tadcompare 1.14.0-1 0 0.00 TADCompare: Identification and characterization of differential TADs BioArchLinuxBot 2024-05-03 07:59 (UTC)
r-biocset 1.18.0-1 0 0.00 Representing Different Biological Sets BioArchLinuxBot 2024-05-03 07:44 (UTC)
r-tcc 1.44.0-1 0 0.00 TCC: Differential expression analysis for tag count data with robust normalization strategies BioArchLinuxBot 2024-05-03 07:44 (UTC)
r-switchde 1.30.0-1 0 0.00 Switch-like differential expression across single-cell trajectories BioArchLinuxBot 2024-05-03 07:43 (UTC)
r-synmut 1.20.0-1 0 0.00 SynMut: Designing Synonymously Mutated Sequences with Different Genomic Signatures BioArchLinuxBot 2024-05-03 07:31 (UTC)
r-tadar 1.2.0-1 0 0.00 Transcriptome Analysis of Differential Allelic Representation pekkarr 2024-05-03 06:01 (UTC)
r-methylsig 1.16.0-1 0 0.00 MethylSig: Differential Methylation Testing for WGBS and RRBS Data BioArchLinuxBot 2024-05-03 05:35 (UTC)
r-dmrseq 1.24.0-1 0 0.00 Detection and inference of differentially methylated regions from Whole Genome Bisulfite Sequencing BioArchLinuxBot 2024-05-03 05:32 (UTC)
r-damefinder 1.16.0-1 0 0.00 Finds DAMEs - Differential Allelicly MEthylated regions BioArchLinuxBot 2024-05-03 05:11 (UTC)
r-msmstests 1.42.0-1 0 0.00 LC-MS/MS Differential Expression Tests BioArchLinuxBot 2024-05-03 04:03 (UTC)
r-condiments 1.12.0-1 0 0.00 Differential Topology, Progression and Differentiation BioArchLinuxBot 2024-05-03 03:54 (UTC)
r-ancombc 2.6.0-1 0 0.00 Microbiome differential abudance and correlation analyses with bias correction BioArchLinuxBot 2024-05-03 03:52 (UTC)
r-methylinheritance 1.28.0-1 0 0.00 Permutation-Based Analysis associating Conserved Differentially Methylated Elements Across Multiple Generations to a Treatment Effect BioArchLinuxBot 2024-05-03 03:38 (UTC)
r-mmdiff2 1.32.0-1 0 0.00 Statistical Testing for ChIP-Seq data sets BioArchLinuxBot 2024-05-03 03:14 (UTC)
r-hicdoc 1.6.0-1 0 0.00 A/B compartment detection and differential analysis pekkarr 2024-05-03 02:13 (UTC)
r-dep 1.26.0-1 0 0.00 Differential Enrichment analysis of Proteomics data BioArchLinuxBot 2024-05-03 02:08 (UTC)
r-airpart 1.12.0-1 0 0.00 Differential cell-type-specific allelic imbalance BioArchLinuxBot 2024-05-03 01:50 (UTC)
r-distinct 1.16.0-1 0 0.00 distinct: a method for differential analyses via hierarchical permutation tests BioArchLinuxBot 2024-05-03 01:48 (UTC)
r-meb 1.18.0-1 0 0.00 A normalization-invariant minimum enclosing ball method to detect differentially expressed genes for RNA-seq data BioArchLinuxBot 2024-05-03 01:39 (UTC)
r-scdd 1.28.0-1 0 0.00 Mixture modeling of single-cell RNA-seq data to identify genes with differential distributions BioArchLinuxBot 2024-05-03 01:34 (UTC)
r-rificomparative 1.4.0-1 0 0.00 'rifiComparative' compares the output of rifi from two different conditions pekkarr 2024-05-03 01:17 (UTC)
r-dmchmm 1.26.0-1 0 0.00 Differentially Methylated CpG using Hidden Markov Model BioArchLinuxBot 2024-05-03 01:10 (UTC)
r-dmcfb 1.18.0-1 0 0.00 Differentially Methylated Cytosines via a Bayesian Functional Approach BioArchLinuxBot 2024-05-03 01:07 (UTC)

742 packages found. Page 2 of 15.

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