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r-scmageck
|
1.9.1-4 |
0 |
0.00
|
Identify genes associated with multiple expression phenotypes in single-cell CRISPR screening data |
BioArchLinuxBot
|
2023-04-29 05:01 (UTC) |
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r-scalign
|
1.12.0-4 |
0 |
0.00
|
An alignment and integration method for single cell genomics |
BioArchLinuxBot
|
2023-04-29 05:24 (UTC) |
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r-saigegds
|
2.2.1-3 |
0 |
0.00
|
Scalable Implementation of Generalized mixed models using GDS files in Phenome-Wide Association Studies |
BioArchLinuxBot
|
2024-02-08 12:20 (UTC) |
|
r-rtracklayer
|
1.62.0-2 |
0 |
0.00
|
R interface to genome annotation files and the UCSC genome browser |
BioArchLinuxBot
|
2024-04-27 18:02 (UTC) |
|
r-rtopper
|
1.48.0-1 |
0 |
0.00
|
This package is designed to perform Gene Set Analysis across multiple genomic platforms |
BioArchLinuxBot
|
2023-10-26 06:24 (UTC) |
|
r-rtcga
|
1.32.0-1 |
0 |
0.00
|
The Cancer Genome Atlas Data Integration |
BioArchLinuxBot
|
2023-10-25 21:25 (UTC) |
|
r-rlmm
|
1.64.0-2 |
0 |
0.00
|
A Genotype Calling Algorithm for Affymetrix SNP Arrays |
BioArchLinuxBot
|
2024-04-05 18:05 (UTC) |
|
r-rjmcmcnucleosomes
|
1.26.0-1 |
0 |
0.00
|
Bayesian hierarchical model for genome-wide nucleosome positioning with high-throughput short-read data (MNase-Seq) |
BioArchLinuxBot
|
2023-10-27 11:44 (UTC) |
|
r-ribocrypt
|
1.8.0-1 |
0 |
0.00
|
Interactive visualization in genomics |
BioArchLinuxBot
|
2023-10-27 13:10 (UTC) |
|
r-rgmql
|
1.22.1-1 |
0 |
0.00
|
GenoMetric Query Language for R/Bioconductor |
BioArchLinuxBot
|
2024-03-25 18:05 (UTC) |
|
r-rgenometracksdata
|
0.99.0-4 |
0 |
0.00
|
Demonstration Data from rGenomeTracks Package |
BioArchLinuxBot
|
2022-06-06 12:39 (UTC) |
|
r-rgenometracks
|
1.8.0-1 |
0 |
0.00
|
Integerated visualization of epigenomic data |
BioArchLinuxBot
|
2023-10-26 04:29 (UTC) |
|
r-resolve
|
1.4.0-4 |
0 |
0.00
|
An R package for the efficient analysis of mutational signatures from cancer genomes |
pekkarr
|
2024-04-28 17:56 (UTC) |
|
r-repviz
|
1.18.0-1 |
0 |
0.00
|
Replicate oriented Visualization of a genomic region |
BioArchLinuxBot
|
2023-10-26 04:39 (UTC) |
|
r-repitools
|
1.48.0-1 |
0 |
0.00
|
Epigenomic tools |
BioArchLinuxBot
|
2023-10-27 11:30 (UTC) |
|
r-regionreport
|
1.36.0-1 |
0 |
0.00
|
Generate HTML or PDF reports for a set of genomic regions or DESeq2/edgeR results |
BioArchLinuxBot
|
2023-10-28 12:14 (UTC) |
|
r-regionereloaded
|
1.4.0-4 |
0 |
0.00
|
Multiple Association for Genomic Region Sets |
pekkarr
|
2024-04-27 21:27 (UTC) |
|
r-regioner
|
1.34.0-1 |
0 |
0.00
|
Association analysis of genomic regions based on permutation tests |
BioArchLinuxBot
|
2023-10-27 11:06 (UTC) |
|
r-recoup
|
1.30.0-1 |
0 |
0.00
|
An R package for the creation of complex genomic profile plots |
BioArchLinuxBot
|
2023-10-27 10:50 (UTC) |
|
r-rcistarget
|
1.20.0-2 |
0 |
0.00
|
RcisTarget Identify transcription factor binding motifs enriched on a list of genes or genomic regions |
BioArchLinuxBot
|
2024-02-14 18:04 (UTC) |
|
r-rarevariantvis
|
2.30.0-1 |
0 |
0.00
|
A suite for analysis of rare genomic variants in whole genome sequencing data |
BioArchLinuxBot
|
2023-10-27 12:53 (UTC) |
|
r-radiogx
|
2.6.0-1 |
0 |
0.00
|
Analysis of Large-Scale Radio-Genomic Data |
BioArchLinuxBot
|
2023-10-28 14:11 (UTC) |
|
r-r453plus1toolbox
|
1.52.0-1 |
0 |
0.00
|
A package for importing and analyzing data from Roche's Genome Sequencer System |
BioArchLinuxBot
|
2023-10-27 12:32 (UTC) |
|
r-quantsmooth
|
1.68.0-1 |
0 |
0.00
|
Quantile smoothing and genomic visualization of array data |
BioArchLinuxBot
|
2023-10-25 19:48 (UTC) |
|
r-qpgraph
|
2.36.0-1 |
0 |
0.00
|
Estimation of genetic and molecular regulatory networks from high-throughput genomics data |
BioArchLinuxBot
|
2023-10-27 10:47 (UTC) |
|
r-pwrewas
|
1.14.0-2 |
0 |
0.00
|
A user-friendly tool for comprehensive power estimation for epigenome wide association studies (EWAS) |
BioArchLinuxBot
|
2024-02-13 18:12 (UTC) |
|
r-proteodisco
|
1.8.0-1 |
0 |
0.00
|
Generation of customized protein variant databases from genomic variants, splice-junctions and manual sequences |
BioArchLinuxBot
|
2023-10-27 12:50 (UTC) |
|
r-profileplyr
|
1.18.0-1 |
0 |
0.00
|
Visualization and annotation of read signal over genomic ranges with profileplyr |
BioArchLinuxBot
|
2023-11-01 12:59 (UTC) |
|
r-predictionet
|
1.40.0-4 |
0 |
0.00
|
Inference for predictive networks designed for (but not limited to) genomic data |
BioArchLinuxBot
|
2022-06-07 13:19 (UTC) |
|
r-pogos
|
1.22.0-1 |
0 |
0.00
|
PharmacOGenomics Ontology Support |
BioArchLinuxBot
|
2023-10-28 13:54 (UTC) |
|
r-plyranges
|
1.22.0-1 |
0 |
0.00
|
A fluent interface for manipulating GenomicRanges |
BioArchLinuxBot
|
2023-10-27 09:08 (UTC) |
|
r-plyinteractions
|
1.0.0-3 |
0 |
0.00
|
Extending tidy verbs to genomic interactions |
pekkarr
|
2024-04-27 20:32 (UTC) |
|
r-plsgenomics
|
1.5.3-1 |
0 |
0.00
|
PLS Analyses for Genomics |
BioArchLinuxBot
|
2024-03-28 12:02 (UTC) |
|
r-plotgardener
|
1.8.3-1 |
0 |
0.00
|
Coordinate-Based Genomic Visualization Package for R |
BioArchLinuxBot
|
2024-04-02 00:04 (UTC) |
|
r-philr
|
1.28.0-1 |
0 |
0.00
|
Phylogenetic partitioning based ILR transform for metagenomics data |
BioArchLinuxBot
|
2023-10-26 00:23 (UTC) |
|
r-phenstat
|
2.38.0-1 |
0 |
0.00
|
Statistical analysis of phenotypic data |
BioArchLinuxBot
|
2023-10-25 23:40 (UTC) |
|
r-phenotest
|
1.50.0-1 |
0 |
0.00
|
Tools to test association between gene expression and phenotype in a way that is efficient, structured, fast and scalable. We also provide tools to do GSEA (Gene set enrichment analysis) and copy number variation. |
BioArchLinuxBot
|
2023-10-26 06:45 (UTC) |
|
r-phenopath
|
1.26.0-1 |
0 |
0.00
|
Genomic trajectories with heterogeneous genetic and environmental backgrounds |
BioArchLinuxBot
|
2023-10-27 06:47 (UTC) |
|
r-phenomis
|
1.4.0-3 |
0 |
0.00
|
Postprocessing and univariate analysis of omics data |
pekkarr
|
2024-04-27 05:01 (UTC) |
|
r-phenogeneranker
|
1.10.0-1 |
0 |
0.00
|
PhenoGeneRanker: A gene and phenotype prioritization tool |
BioArchLinuxBot
|
2023-10-26 01:13 (UTC) |
|
r-phemd
|
1.18.0-2 |
0 |
0.00
|
Phenotypic EMD for comparison of single-cell samples |
BioArchLinuxBot
|
2024-04-28 18:00 (UTC) |
|
r-pharmacogx
|
3.6.0-1 |
0 |
0.00
|
Analysis of Large-Scale Pharmacogenomic Data |
BioArchLinuxBot
|
2023-10-28 14:10 (UTC) |
|
r-pdatk
|
1.10.0-1 |
0 |
0.00
|
Pancreatic Ductal Adenocarcinoma Tool-Kit |
BioArchLinuxBot
|
2023-10-28 14:32 (UTC) |
|
r-pcan
|
1.30.0-1 |
0 |
0.00
|
Phenotype Consensus ANalysis (PCAN) |
BioArchLinuxBot
|
2023-10-25 22:12 (UTC) |
|
r-pasilla
|
1.30.0-1 |
0 |
0.00
|
Data package with per-exon and per-gene read counts of RNA-seq samples of Pasilla knock-down by Brooks et al., Genome Research 2011. |
BioArchLinuxBot
|
2023-10-27 10:01 (UTC) |
|
r-panvizgenerator
|
1.22.0-4 |
0 |
0.00
|
Generate PanViz visualisations from your pangenome |
BioArchLinuxBot
|
2022-07-07 06:06 (UTC) |
|
r-panr
|
1.48.0-1 |
0 |
0.00
|
Posterior association networks and functional modules inferred from rich phenotypes of gene perturbations |
BioArchLinuxBot
|
2023-10-26 01:23 (UTC) |
|
r-org.sc.sgd.db
|
3.18.0-1 |
0 |
0.00
|
Genome wide annotation for Yeast |
BioArchLinuxBot
|
2023-10-26 04:15 (UTC) |
|
r-org.rn.eg.db
|
3.18.0-1 |
0 |
0.00
|
Genome wide annotation for Rat |
BioArchLinuxBot
|
2023-10-26 04:07 (UTC) |
|
r-org.mm.eg.db
|
3.18.0-1 |
0 |
0.00
|
Genome wide annotation for Mouse |
BioArchLinuxBot
|
2023-10-26 03:53 (UTC) |