403 packages found. Page 5 of 9.

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Name Version Votes Popularity? Description Maintainer Last Updated
r-deqms 1.22.0-1 0 0.00 a tool to perform statistical analysis of differential protein expression for quantitative proteomics data. BioArchLinuxBot 2024-05-01 20:20 (UTC)
r-demixt 1.20.0-1 0 0.00 Cell type-specific deconvolution of heterogeneous tumor samples with two or three components using expression data from RNAseq or microarray platforms BioArchLinuxBot 2024-05-03 13:57 (UTC)
r-deformats 1.32.0-1 0 0.00 Differential gene expression data formats converter BioArchLinuxBot 2024-05-02 22:05 (UTC)
r-decomplexdisease 1.18.0-4 0 0.00 A tool for differential expression analysis and DEGs based investigation to complex diseases by bi-clustering analysis BioArchLinuxBot 2023-04-29 06:34 (UTC)
r-dearseq 1.16.0-1 0 0.00 Differential Expression Analysis for RNA-seq data through a robust variance component test BioArchLinuxBot 2024-05-01 20:37 (UTC)
r-dcgsa 1.32.0-1 0 0.00 Distance-correlation based Gene Set Analysis for longitudinal gene expression profiles BioArchLinuxBot 2024-05-01 19:46 (UTC)
r-dcanr 1.20.0-1 0 0.00 Differential co-expression/association network analysis BioArchLinuxBot 2024-05-01 21:34 (UTC)
r-cytokernel 1.10.0-1 0 0.00 Differential expression using kernel-based score test BioArchLinuxBot 2024-05-02 20:27 (UTC)
r-cycle 1.58.0-1 0 0.00 Significance of periodic expression pattern in time-series data BioArchLinuxBot 2024-05-01 22:56 (UTC)
r-ctsge 1.30.0-1 0 0.00 Clustering of Time Series Gene Expression data BioArchLinuxBot 2024-05-01 20:34 (UTC)
r-ctrap 1.22.0-1 0 0.00 Identification of candidate causal perturbations from differential gene expression data BioArchLinuxBot 2024-05-02 02:18 (UTC)
r-ctggem 1.7.0-4 0 0.00 Generating Tree Hierarchy Visualizations from Gene Expression Data BioArchLinuxBot 2022-11-04 06:20 (UTC)
r-csdr 1.10.0-1 0 0.00 Differential gene co-expression BioArchLinuxBot 2024-05-02 20:54 (UTC)
r-countclust 1.23.1-4 0 0.00 Clustering and Visualizing RNA-Seq Expression Data using Grade of Membership Models BioArchLinuxBot 2022-11-04 06:07 (UTC)
r-cotan 2.4.1-1 0 0.00 COexpression Tables ANalysis pekkarr 2024-05-07 12:29 (UTC)
r-coseq 1.28.0-1 0 0.00 Co-Expression Analysis of Sequencing Data BioArchLinuxBot 2024-05-03 00:16 (UTC)
r-consensusov 1.24.0-1 0 0.00 Gene expression-based subtype classification for high-grade serous ovarian cancer BioArchLinuxBot 2023-10-30 18:32 (UTC)
r-compcoder 1.40.0-1 0 0.00 RNAseq data simulation, differential expression analysis and performance comparison of differential expression methods BioArchLinuxBot 2024-05-02 05:50 (UTC)
r-coexnet 1.19.1-4 0 0.00 coexnet: An R package to build CO-EXpression NETworks from Microarray Data BioArchLinuxBot 2023-04-29 05:18 (UTC)
r-cnvranger 1.20.0-1 0 0.00 Summarization and expression/phenotype association of CNV ranges BioArchLinuxBot 2024-05-03 07:47 (UTC)
r-clusterseq 1.28.0-1 0 0.00 Clustering of high-throughput sequencing data by identifying co-expression patterns BioArchLinuxBot 2024-05-02 00:46 (UTC)
r-clusterrepro 0.9-7 0 0.00 Reproducibility of Gene Expression Clusters BioArchLinuxBot 2024-03-14 18:06 (UTC)
r-chipxpress 1.48.0-1 0 0.00 ChIPXpress: enhanced transcription factor target gene identification from ChIP-seq and ChIP-chip data using publicly available gene expression profiles BioArchLinuxBot 2024-05-03 02:15 (UTC)
r-cetf 1.16.0-1 0 0.00 Coexpression for Transcription Factors using Regulatory Impact Factors and Partial Correlation and Information Theory analysis BioArchLinuxBot 2024-05-03 04:08 (UTC)
r-cemitool 1.28.0-1 0 0.00 Co-expression Modules identification Tool BioArchLinuxBot 2024-05-03 04:06 (UTC)
r-cbnplot 1.4.0-1 0 0.00 plot bayesian network inferred from gene expression data based on enrichment analysis results pekkarr 2024-05-04 06:08 (UTC)
r-carnival 2.14.0-1 0 0.00 A CAusal Reasoning tool for Network Identification (from gene expression data) using Integer VALue programming BioArchLinuxBot 2024-05-01 21:15 (UTC)
r-cager 2.10.0-1 0 0.00 Analysis of CAGE (Cap Analysis of Gene Expression) sequencing data for precise mapping of transcription start sites and promoterome mining BioArchLinuxBot 2024-05-03 06:36 (UTC)
r-cagefightr 1.24.0-1 0 0.00 Analysis of Cap Analysis of Gene Expression (CAGE) data using Bioconductor BioArchLinuxBot 2024-05-03 06:26 (UTC)
r-cafe 1.40.0-1 0 0.00 Chromosmal Aberrations Finder in Expression data BioArchLinuxBot 2024-05-03 13:22 (UTC)
r-bridge 1.62.0-4 0 0.00 Bayesian Robust Inference for Differential Gene Expression BioArchLinuxBot 2023-04-29 05:02 (UTC)
r-breastcancervdx 1.42.0-1 0 0.00 Gene expression datasets published by Wang et al. [2005] and Minn et al. [2007] (VDX) BioArchLinuxBot 2024-05-04 00:26 (UTC)
r-brainstars 1.34.0-1 0 0.00 query gene expression data and plots from BrainStars BioArchLinuxBot 2022-06-07 13:11 (UTC)
r-brainsaber 1.8.0-4 0 0.00 Brain Span Atlas in Biobase Expressionset R toolset BioArchLinuxBot 2023-04-29 05:47 (UTC)
r-bladderbatch 1.42.0-1 0 0.00 Bladder gene expression data illustrating batch effects BioArchLinuxBot 2024-05-04 00:50 (UTC)
r-bioqc 1.32.0-1 0 0.00 Detect tissue heterogeneity in expression profiles with gene sets BioArchLinuxBot 2024-05-01 19:01 (UTC)
r-bgx 1.70.0-1 0 0.00 Bayesian Gene eXpression BioArchLinuxBot 2024-05-02 01:48 (UTC)
r-bgmix 1.59.0-1 0 0.00 Bayesian models for differential gene expression BioArchLinuxBot 2024-02-11 18:01 (UTC)
r-bgeedb 2.30.0-1 0 0.00 Annotation and gene expression data retrieval from Bgee database. TopAnat, an anatomical entities Enrichment Analysis tool for UBERON ontology BioArchLinuxBot 2024-05-02 23:25 (UTC)
r-bgeecall 1.18.1-1 0 0.00 Automatic RNA-Seq present/absent gene expression calls generation BioArchLinuxBot 2023-11-02 00:35 (UTC)
r-bench 1.1.3-3 0 0.00 High Precision Timing of R Expressions BioArchLinuxBot 2023-05-08 12:05 (UTC)
r-bcellviper 1.40.0-1 0 0.00 Human B-cell transcriptional interactome and normal human B-cell expression data BioArchLinuxBot 2024-05-04 00:49 (UTC)
r-bayseq 2.38.0-1 0 0.00 Empirical Bayesian analysis of patterns of differential expression in count data BioArchLinuxBot 2024-05-01 22:05 (UTC)
r-ballgown 2.36.0-1 0 0.00 Flexible, isoform-level differential expression analysis BioArchLinuxBot 2024-05-03 13:50 (UTC)
r-bader 1.42.0-1 0 0.00 Bayesian Analysis of Differential Expression in RNA Sequencing Data BioArchLinuxBot 2024-05-02 03:52 (UTC)
r-attract 1.56.0-1 0 0.00 Methods to Find the Gene Expression Modules that Represent the Drivers of Kauffman's Attractor Landscape BioArchLinuxBot 2024-05-03 14:31 (UTC)
r-arraymvout 1.62.0-1 0 0.00 multivariate outlier detection for expression array QA BioArchLinuxBot 2024-05-03 15:17 (UTC)
r-arrayexpress 1.64.0-1 0 0.00 Access the ArrayExpress Microarray Database at EBI and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet BioArchLinuxBot 2024-05-03 00:27 (UTC)
r-antiprofiles 1.44.0-1 0 0.00 Implementation of gene expression anti-profiles BioArchLinuxBot 2024-05-02 04:31 (UTC)
r-annotationtools 1.78.0-1 0 0.00 Annotate microarrays and perform cross-species gene expression analyses using flat file databases BioArchLinuxBot 2024-05-02 12:37 (UTC)

403 packages found. Page 5 of 9.

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