172 packages found. Page 3 of 4.

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Name Version Votes Popularity? Description Maintainer Last Updated
r-powsc 1.12.0-1 0 0.00 Simulation, power evaluation, and sample size recommendation for single cell RNA-seq BioArchLinuxBot 2024-05-03 00:15 (UTC)
r-pram 1.20.0-1 0 0.00 Pooling RNA-seq datasets for assembling transcript models BioArchLinuxBot 2024-05-03 01:01 (UTC)
r-prebs 1.44.0-1 0 0.00 Probe region expression estimation for RNA-seq data for improved microarray comparability BioArchLinuxBot 2024-05-02 23:49 (UTC)
r-proactiv 1.14.0-1 0 0.00 Estimate Promoter Activity from RNA-Seq data BioArchLinuxBot 2024-05-08 18:03 (UTC)
r-quantiseqr 1.12.0-1 0 0.00 Quantification of the Tumor Immune contexture from RNA-seq data BioArchLinuxBot 2024-05-02 20:01 (UTC)
r-rbm 1.36.0-1 0 0.00 RBM: a R package for microarray and RNA-Seq data analysis BioArchLinuxBot 2024-05-01 22:51 (UTC)
r-rmmquant 1.22.0-1 0 0.00 RNA-Seq multi-mapping Reads Quantification Tool BioArchLinuxBot 2024-05-03 02:46 (UTC)
r-rnasense 1.18.0-1 0 0.00 Analysis of Time-Resolved RNA-Seq Data BioArchLinuxBot 2024-05-02 19:49 (UTC)
r-rnaseqcomp 1.34.0-1 0 0.00 Benchmarks for RNA-seq Quantification Pipelines BioArchLinuxBot 2024-05-02 04:26 (UTC)
r-rnaseqr 1.16.0-4 0 0.00 RNASeqR: an R package for automated two-group RNA-Seq analysis workflow BioArchLinuxBot 2023-04-29 08:38 (UTC)
r-roar 1.40.0-1 0 0.00 Identify differential APA usage from RNA-seq alignments BioArchLinuxBot 2024-05-03 00:55 (UTC)
r-roseq 1.16.0-1 0 0.00 Modeling expression ranks for noise-tolerant differential expression analysis of scRNA-Seq data BioArchLinuxBot 2024-05-01 18:58 (UTC)
r-ruvseq 1.38.0-1 0 0.00 Remove Unwanted Variation from RNA-Seq Data BioArchLinuxBot 2024-05-03 04:15 (UTC)
r-saturn 1.12.0-1 0 0.00 Scalable Analysis of Differential Transcript Usage for Bulk and Single-Cell RNA-sequencing Applications BioArchLinuxBot 2024-05-02 19:39 (UTC)
r-saver 1.1.2-4 0 0.00 Single-Cell RNA-Seq Gene Expression Recovery BioArchLinuxBot 2022-06-06 14:00 (UTC)
r-scannotatr 1.10.0-1 0 0.00 Pretrained learning models for cell type prediction on single cell RNA-sequencing data BioArchLinuxBot 2024-05-02 23:57 (UTC)
r-scarray 1.12.0-1 0 0.00 Large-scale single-cell RNA-seq data manipulation with GDS files BioArchLinuxBot 2024-05-02 21:20 (UTC)
r-scarray.sat 1.4.0-1 0 0.00 Large-scale single-cell RNA-seq data analysis using GDS files and Seurat pekkarr 2024-05-03 00:09 (UTC)
r-scbfa 1.18.0-1 0 0.00 A dimensionality reduction tool using gene detection pattern to mitigate noisy expression profile of scRNA-seq BioArchLinuxBot 2024-05-03 13:39 (UTC)
r-scbn 1.22.0-1 0 0.00 A statistical normalization method and differential expression analysis for RNA-seq data between different species BioArchLinuxBot 2024-05-02 03:14 (UTC)
r-scbubbletree 1.6.0-1 0 0.00 Quantitative visual exploration of scRNA-seq data pekkarr 2024-05-02 05:55 (UTC)
r-scclassifr 1.2.0-3 0 0.00 Pretrained learning models for cell type prediction on single cell RNA-sequencing data BioArchLinuxBot 2022-06-07 13:21 (UTC)
r-scdd 1.28.0-1 0 0.00 Mixture modeling of single-cell RNA-seq data to identify genes with differential distributions BioArchLinuxBot 2024-05-03 01:34 (UTC)
r-scddboost 1.6.0-1 0 0.00 A compositional model to assess expression changes from single-cell rna-seq data pekkarr 2024-05-02 21:56 (UTC)
r-scmap 1.26.0-1 0 0.00 A tool for unsupervised projection of single cell RNA-seq data BioArchLinuxBot 2024-05-02 21:29 (UTC)
r-scmerge 1.20.0-1 0 0.00 scMerge: Merging multiple batches of scRNA-seq data BioArchLinuxBot 2024-05-03 04:01 (UTC)
r-scnorm 1.26.0-1 0 0.00 Normalization of single cell RNA-seq data BioArchLinuxBot 2024-05-02 21:36 (UTC)
r-scpipe 2.4.0-1 0 0.00 pipeline for single cell RNA-seq data analysis BioArchLinuxBot 2024-05-03 01:58 (UTC)
r-scran 1.32.0-1 0 0.00 Methods for Single-Cell RNA-Seq Data Analysis BioArchLinuxBot 2024-05-03 00:05 (UTC)
r-screclassify 1.10.0-1 0 0.00 scReClassify: post hoc cell type classification of single-cell RNA-seq data BioArchLinuxBot 2024-05-02 21:28 (UTC)
r-screcover 1.20.0-1 0 0.00 scRecover for imputation of single-cell RNA-seq data BioArchLinuxBot 2024-05-01 23:51 (UTC)
r-scrnaseq 2.18.0-1 0 0.00 Collection of Public Single-Cell RNA-Seq Datasets BioArchLinuxBot 2024-05-04 18:38 (UTC)
r-scruff 1.22.0-1 0 0.00 Single Cell RNA-Seq UMI Filtering Facilitator (scruff) BioArchLinuxBot 2024-05-03 13:32 (UTC)
r-scshapes 1.10.0-1 0 0.00 A Statistical Framework for Modeling and Identifying Differential Distributions in Single-cell RNA-sequencing Data BioArchLinuxBot 2024-05-01 19:50 (UTC)
r-sctensor 2.14.0-1 0 0.00 Detection of cell-cell interaction from single-cell RNA-seq dataset by tensor decomposition BioArchLinuxBot 2024-05-03 14:38 (UTC)
r-sctgif 1.18.0-1 0 0.00 Cell type annotation for unannotated single-cell RNA-Seq data BioArchLinuxBot 2024-05-03 12:53 (UTC)
r-sctreeviz 1.10.0-1 0 0.00 R/Bioconductor package to interactively explore and visualize single cell RNA-seq datasets with hierarhical annotations BioArchLinuxBot 2024-05-03 14:45 (UTC)
r-scuttle 1.14.0-1 0 0.00 Single-Cell RNA-Seq Analysis Utilities BioArchLinuxBot 2024-05-02 21:18 (UTC)
r-seqgsea 1.44.0-1 0 0.00 Gene Set Enrichment Analysis (GSEA) of RNA-Seq Data: integrating differential expression and splicing BioArchLinuxBot 2024-05-02 23:07 (UTC)
r-sgseq 1.38.0-1 0 0.00 Splice event prediction and quantification from RNA-seq data BioArchLinuxBot 2024-05-03 02:29 (UTC)
r-sincell 1.36.0-1 0 0.00 R package for the statistical assessment of cell state hierarchies from single-cell RNA-seq data BioArchLinuxBot 2024-05-01 21:24 (UTC)
r-singlecelltk 2.14.0-1 0 0.00 Comprehensive and Interactive Analysis of Single Cell RNA-Seq Data BioArchLinuxBot 2024-05-04 18:42 (UTC)
r-singler 2.6.0-1 0 0.00 Reference-Based Single-Cell RNA-Seq Annotation BioArchLinuxBot 2024-05-02 19:56 (UTC)
r-sipsic 1.4.0-1 0 0.00 Calculate Pathway Scores for Each Cell in scRNA-Seq Data pekkarr 2024-05-02 21:50 (UTC)
r-slalom 1.26.0-1 0 0.00 Factorial Latent Variable Modeling of Single-Cell RNA-Seq Data BioArchLinuxBot 2024-05-03 12:22 (UTC)
r-speckle 1.4.0-1 0 0.00 Statistical methods for analysing single cell RNA-seq data pekkarr 2024-05-11 12:18 (UTC)
r-splicinggraphs 1.44.0-1 0 0.00 Create, manipulate, visualize splicing graphs, and assign RNA-seq reads to them BioArchLinuxBot 2024-05-03 08:14 (UTC)
r-srnadiff 1.24.0-1 0 0.00 Finding differentially expressed unannotated genomic regions from RNA-seq data BioArchLinuxBot 2024-05-03 08:36 (UTC)
r-sseq 1.42.0-1 0 0.00 Shrinkage estimation of dispersion in Negative Binomial models for RNA-seq experiments with small sample size BioArchLinuxBot 2024-05-01 18:07 (UTC)
r-ssviz 1.38.0-1 0 0.00 A small RNA-seq visualizer and analysis toolkit BioArchLinuxBot 2024-05-03 07:37 (UTC)

172 packages found. Page 3 of 4.

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