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r-synmut
|
1.20.0-1 |
0 |
0.00
|
SynMut: Designing Synonymously Mutated Sequences with Different Genomic Signatures |
BioArchLinuxBot
|
2024-05-03 07:31 (UTC) |
|
r-single
|
1.7.0-1 |
0 |
0.00
|
Accurate consensus sequence from nanopore reads of a gene library |
pekkarr
|
2024-05-02 23:50 (UTC) |
|
r-seqtools
|
1.38.0-1 |
0 |
0.00
|
Analysis of nucleotide, sequence and quality content on fastq files |
BioArchLinuxBot
|
2024-05-02 05:10 (UTC) |
|
r-seqpattern
|
1.36.0-1 |
0 |
0.00
|
Visualising oligonucleotide patterns and motif occurrences across a set of sorted sequences |
BioArchLinuxBot
|
2024-05-02 00:07 (UTC) |
|
r-seqminer
|
9.4-1 |
0 |
0.00
|
Efficiently Read Sequence Data (VCF Format, BCF Format, METAL Format and BGEN Format) into R |
BioArchLinuxBot
|
2024-02-03 18:02 (UTC) |
|
r-seqmagick
|
0.1.7-2 |
0 |
0.00
|
Sequence Manipulation Utilities |
BioArchLinuxBot
|
2024-04-26 14:22 (UTC) |
|
r-seqlogo
|
1.70.0-1 |
0 |
0.00
|
Sequence logos for DNA sequence alignments |
BioArchLinuxBot
|
2024-05-02 03:17 (UTC) |
|
r-seqinr
|
4.2.36-1 |
0 |
0.00
|
Biological Sequences Retrieval and Analysis |
BioArchLinuxBot
|
2023-12-08 18:03 (UTC) |
|
r-seqcombo
|
1.26.0-1 |
0 |
0.00
|
Visualization Tool for Sequence Recombination and Reassortment |
BioArchLinuxBot
|
2024-05-01 21:30 (UTC) |
|
r-seqarray
|
1.44.0-1 |
0 |
0.00
|
Data management of large-scale whole-genome sequence variant calls |
BioArchLinuxBot
|
2024-05-02 00:09 (UTC) |
|
r-seqarchrplus
|
1.4.0-1 |
0 |
0.00
|
Downstream analyses of promoter sequence architectures and HTML report generation |
pekkarr
|
2024-05-03 04:24 (UTC) |
|
r-seqarchr
|
1.8.0-1 |
0 |
0.00
|
Identify Different Architectures of Sequence Elements |
pekkarr
|
2024-05-02 18:36 (UTC) |
|
r-scifer
|
1.6.0-1 |
0 |
0.00
|
Single-Cell Immunoglobulin Filtering of Sanger Sequences |
pekkarr
|
2024-05-03 18:30 (UTC) |
|
r-sarks
|
1.16.0-1 |
0 |
0.00
|
Suffix Array Kernel Smoothing for discovery of correlative sequence motifs and multi-motif domains |
BioArchLinuxBot
|
2024-05-02 00:25 (UTC) |
|
r-sangeranalyser
|
1.14.0-1 |
0 |
0.00
|
sangeranalyseR: a suite of functions for the analysis of Sanger sequence data in R |
BioArchLinuxBot
|
2024-05-03 18:50 (UTC) |
|
r-rsweep
|
1.16.0-1 |
0 |
0.00
|
Functions to creation of low dimensional comparative matrices of Amino Acid Sequence occurrences |
BioArchLinuxBot
|
2024-05-02 04:36 (UTC) |
|
r-rprimer
|
1.8.0-1 |
0 |
0.00
|
Design Degenerate Oligos from a Multiple DNA Sequence Alignment |
pekkarr
|
2024-05-02 18:38 (UTC) |
|
r-rfastp
|
1.14.0-1 |
0 |
0.00
|
An Ultra-Fast and All-in-One Fastq Preprocessor (Quality Control, Adapter, low quality and polyX trimming) and UMI Sequence Parsing). |
BioArchLinuxBot
|
2024-05-01 20:18 (UTC) |
|
r-raids
|
1.2.0-1 |
0 |
0.00
|
Accurate Inference of Genetic Ancestry from Cancer Sequences |
pekkarr
|
2024-05-03 05:12 (UTC) |
|
r-r453plus1toolbox
|
1.54.0-1 |
0 |
0.00
|
A package for importing and analyzing data from Roche's Genome Sequencer System |
BioArchLinuxBot
|
2024-05-03 05:01 (UTC) |
|
r-pwalign
|
1.0.0-1 |
0 |
0.00
|
Perform pairwise sequence alignments |
pekkarr
|
2024-05-02 11:44 (UTC) |
|
r-protr
|
1.7.1-1 |
0 |
0.00
|
Generating Various Numerical Representation Schemes for Protein Sequences |
BioArchLinuxBot
|
2024-04-20 06:01 (UTC) |
|
r-proteodisco
|
1.10.0-1 |
0 |
0.00
|
Generation of customized protein variant databases from genomic variants, splice-junctions and manual sequences |
BioArchLinuxBot
|
2024-05-03 05:02 (UTC) |
|
r-pqsfinder
|
2.20.0-1 |
0 |
0.00
|
Identification of potential quadruplex forming sequences |
BioArchLinuxBot
|
2024-05-02 00:13 (UTC) |
|
r-pinfsc50
|
1.3.0-2 |
0 |
0.00
|
Sequence ('FASTA'), Annotation ('GFF') and Variants ('VCF') for 17 Samples of 'P. Infestans" and 1 'P. Mirabilis' |
BioArchLinuxBot
|
2024-03-16 18:08 (UTC) |
|
r-periodicdna
|
1.14.0-1 |
0 |
0.00
|
Set of tools to identify periodic occurrences of k-mers in DNA sequences |
BioArchLinuxBot
|
2024-05-03 03:08 (UTC) |
|
r-peptides
|
2.4.6-1 |
0 |
0.00
|
Calculate Indices and Theoretical Physicochemical Properties of Protein Sequences |
BioArchLinuxBot
|
2023-12-14 00:13 (UTC) |
|
r-orfhunter
|
1.12.0-1 |
0 |
0.00
|
Predict open reading frames in nucleotide sequences |
BioArchLinuxBot
|
2024-05-03 03:21 (UTC) |
|
r-odseq
|
1.32.0-1 |
0 |
0.00
|
Outlier detection in multiple sequence alignments |
BioArchLinuxBot
|
2024-05-02 01:53 (UTC) |
|
r-muscle
|
3.46.0-1 |
0 |
0.00
|
Multiple Sequence Alignment with MUSCLE |
BioArchLinuxBot
|
2024-05-02 00:21 (UTC) |
|
r-msar
|
0.6.0-2 |
0 |
0.00
|
Multiple Sequence Alignment for R Shiny |
BioArchLinuxBot
|
2022-06-06 08:17 (UTC) |
|
r-msa2dist
|
1.8.0-1 |
0 |
0.00
|
MSA2dist calculates pairwise distances between all sequences of a DNAStringSet or a AAStringSet using a custom score matrix and conducts codon based analysis |
pekkarr
|
2024-05-04 12:18 (UTC) |
|
r-msa
|
1.36.0-1 |
0 |
0.00
|
Multiple Sequence Alignment |
BioArchLinuxBot
|
2024-05-02 00:12 (UTC) |
|
r-motifstack
|
1.48.0-1 |
0 |
0.00
|
Plot stacked logos for single or multiple DNA, RNA and amino acid sequence |
BioArchLinuxBot
|
2024-05-03 18:57 (UTC) |
|
r-motifdb
|
1.46.0-1 |
0 |
0.00
|
An Annotated Collection of Protein-DNA Binding Sequence Motifs |
BioArchLinuxBot
|
2024-05-03 00:58 (UTC) |
|
r-motifcounter
|
1.28.0-1 |
0 |
0.00
|
R package for analysing TFBSs in DNA sequences |
BioArchLinuxBot
|
2024-05-02 00:22 (UTC) |
|
r-modstrings
|
1.20.0-1 |
0 |
0.00
|
Working with modified nucleotide sequences |
BioArchLinuxBot
|
2024-05-02 00:01 (UTC) |
|
r-matrixrider
|
1.36.0-1 |
0 |
0.00
|
Obtain total affinity and occupancies for binding site matrices on a given sequence |
BioArchLinuxBot
|
2024-05-03 19:00 (UTC) |
|
r-lobstahs
|
1.30.0-1 |
0 |
0.00
|
Lipid and Oxylipin Biomarker Screening through Adduct Hierarchy Sequences |
BioArchLinuxBot
|
2024-05-03 14:50 (UTC) |
|
r-kmer
|
1.1.2-4 |
0 |
0.00
|
Fast K-Mer Counting and Clustering for Biological Sequence Analysis |
BioArchLinuxBot
|
2022-06-06 05:47 (UTC) |
|
r-kebabs
|
1.38.0-1 |
0 |
0.00
|
Kernel-Based Analysis of Biological Sequences |
BioArchLinuxBot
|
2024-05-02 18:35 (UTC) |
|
r-isoformswitchanalyzer
|
2.2.0-2 |
0 |
0.00
|
Identify, Annotate and Visualize Isoform Switches with Functional Consequences from both short- and long-read RNA-seq data |
BioArchLinuxBot
|
2024-04-28 17:14 (UTC) |
|
r-heatmaps
|
1.28.0-1 |
0 |
0.00
|
Flexible Heatmaps for Functional Genomics and Sequence Features |
BioArchLinuxBot
|
2024-05-02 00:23 (UTC) |
|
r-ggseqlogo
|
0.2-1 |
0 |
0.00
|
A 'ggplot2' Extension for Drawing Publication-Ready Sequence Logos |
BioArchLinuxBot
|
2024-02-09 06:23 (UTC) |
|
r-ggmsa
|
1.10.0-1 |
0 |
0.00
|
Plot Multiple Sequence Alignment using 'ggplot2' |
BioArchLinuxBot
|
2024-05-02 01:55 (UTC) |
|
r-genproseq
|
1.6.0-1 |
0 |
0.00
|
Generating Protein Sequences with Deep Generative Models |
pekkarr
|
2024-04-12 15:37 (UTC) |
|
r-gcrma
|
2.76.0-1 |
0 |
0.00
|
Background Adjustment Using Sequence Information |
BioArchLinuxBot
|
2024-05-02 00:02 (UTC) |
|
r-deeppincs
|
1.12.0-1 |
0 |
0.00
|
Protein Interactions and Networks with Compounds based on Sequences using Deep Learning |
BioArchLinuxBot
|
2024-05-01 23:59 (UTC) |
|
r-decipher
|
3.0.0-1 |
0 |
0.00
|
Tools for curating, analyzing, and manipulating biological sequences |
BioArchLinuxBot
|
2024-05-02 00:05 (UTC) |
|
r-daglogo
|
1.42.0-1 |
0 |
0.00
|
dagLogo: a Bioconductor package for visualizing conserved amino acid sequence pattern in groups based on probability theory |
BioArchLinuxBot
|
2024-05-03 19:07 (UTC) |