|
fastq_screen
|
0.15.2-1 |
0 |
0.00
|
A screening application for high througput sequence data |
orphan
|
2022-07-13 09:39 (UTC) |
|
fastqt
|
0.2.3-3 |
2 |
0.00
|
FastQC port to Qt5: A quality control tool for high throughput sequence data. |
Stunts
|
2023-11-08 18:31 (UTC) |
|
fastdnaml
|
1.2.2-0 |
0 |
0.00
|
A tool for construction of phylogenetic trees of DNA sequences using maximum likelihood https://doi.org/10.1093/bioinformatics/10.1.41 |
malacology
|
2024-02-05 02:14 (UTC) |
|
fastahack
|
1.0.0-3 |
0 |
0.00
|
utilities for indexing and sequence extraction from FASTA files |
kbipinkumar
|
2023-06-02 00:01 (UTC) |
|
fairseq-git
|
0.9.0.r1219.g9a00e033-1 |
0 |
0.00
|
Sequence modeling toolkit |
orphan
|
2022-09-08 18:01 (UTC) |
|
exonerate
|
2.4.0-2 |
3 |
0.00
|
A general purpose tool for biological sequence comparison |
malacology
|
2024-02-13 04:43 (UTC) |
|
estscan
|
3.0.3-2 |
0 |
0.00
|
ORF-independent detector of coding DNA sequences |
kbipinkumar
|
2023-04-15 18:01 (UTC) |
|
ent-git
|
r3.388d2cc-1 |
0 |
0.00
|
Utility for testing random and pseudorandom sequences |
cdison
|
2023-11-12 06:20 (UTC) |
|
ent
|
1.2-1 |
19 |
0.00
|
Pseudorandom number sequence test |
Bevan
|
2021-05-14 18:16 (UTC) |
|
emacs-xterm-color
|
2.0-1 |
0 |
0.00
|
Emacs ANSI control sequence to text-property translator |
orphan
|
2020-05-11 08:44 (UTC) |
|
emacs-seq
|
2.24-1 |
1 |
0.00
|
Sequence manipulation functions, included in emacs 27 |
Geballin
|
2023-12-10 15:29 (UTC) |
|
edlib
|
1.2.7-4 |
0 |
0.00
|
Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance |
qubidt
|
2023-06-20 15:32 (UTC) |
|
dynknockd
|
1.1.0-4 |
0 |
0.00
|
Port knocking server using a periodicaly changing sequence |
CoolandonRS
|
2023-11-02 20:58 (UTC) |
|
dynknock
|
1.1.0-2 |
0 |
0.00
|
Port knocker using a periodically changing sequence |
CoolandonRS
|
2023-11-02 21:02 (UTC) |
|
dloopdetector-free
|
1.1-1 |
0 |
0.00
|
Fast loop detector for sequences of monocular images. No SURF support |
nooblercoobler
|
2018-03-20 18:47 (UTC) |
|
diamond-aligner-git
|
0.9.27.r1.g58ee82e-1 |
0 |
0.00
|
Accelerated BLAST compatible local sequence aligner |
orphan
|
2019-11-04 12:32 (UTC) |
|
dialign
|
2.2.1-3 |
1 |
0.00
|
Multiple sequence alignment program |
boenki
|
2015-07-06 15:16 (UTC) |
|
dafs-git
|
r108.e9cc15c-1 |
0 |
0.00
|
dual decomposition for aligning and folding RNA sequences simultaneously |
tzok
|
2024-03-21 13:57 (UTC) |
|
cutadapt
|
4.8-1 |
0 |
0.00
|
Remove adapter sequences from high-throughput sequencing reads. doi:10.14806/ej.17.1.200 |
kbipinkumar
|
2024-04-12 18:21 (UTC) |
|
cuse
|
0.5-2 |
3 |
0.00
|
MIDI sequencer for the terminal |
orphan
|
2022-07-21 06:36 (UTC) |
|
crocoddyl
|
2.0.2-1 |
1 |
0.00
|
optimal control library for robot control under contact sequence |
Nim65s
|
2023-12-17 12:21 (UTC) |
|
crocoddyl-docs
|
2.0.2-1 |
1 |
0.00
|
optimal control library for robot control under contact sequence |
Nim65s
|
2023-12-17 12:21 (UTC) |
|
comet-ms-bin
|
2023.01.1-1 |
0 |
0.00
|
Comet: an open source tandem mass spectrometry (MS/MS) sequence database search tool |
levitsky
|
2023-03-17 19:14 (UTC) |
|
cmd-markdown
|
2.0-3 |
6 |
0.00
|
An enhanced Markdown editor with MathJax, flowchart & sequence-diagram support |
Knight
|
2016-09-30 02:49 (UTC) |
|
clustalx
|
2.1-6 |
3 |
0.00
|
Multiple alignment of nucleic acid and protein sequences |
RaumZeit
|
2021-06-04 16:09 (UTC) |
|
clustalw
|
2.1-4 |
4 |
0.00
|
Clustal W multiple sequence alignment program, version 2.0 |
RaumZeit
|
2021-06-04 16:05 (UTC) |
|
clustal-omega
|
1.2.4-1 |
12 |
0.00
|
Protein sequence alignment program |
Rhinoceros
|
2017-01-19 12:07 (UTC) |
|
cl-split-sequence
|
2.0.1-1 |
0 |
0.00
|
Splits a sequence into a list of subsequences |
grawlinson
|
2022-05-14 22:03 (UTC) |
|
chicken-srfi-127
|
1.3-1 |
0 |
0.00
|
SRFI-127: Lazy Sequences for Chicken Scheme |
Junker
|
2024-01-02 13:49 (UTC) |
|
chicken-lazy-seq
|
2-1 |
0 |
0.00
|
Clojure-like lazy sequences for Chicken Scheme |
Junker
|
2024-01-03 02:26 (UTC) |
|
centrifuge
|
1.0.4.1-1 |
1 |
0.00
|
Rapid and memory-efficient tool for classification of metagenomic sequences |
kbipinkumar
|
2024-02-01 18:02 (UTC) |
|
cdd
|
2018.april.2-1 |
0 |
0.00
|
The Conserved Domain Database is a resource for the annotation of functional units in proteins. Its collection of domain models includes a set curated by NCBI, which utilizes 3D structure to provide insights into sequence/structure/function relationships. |
anadon
|
2018-04-04 20:26 (UTC) |
|
cd-hit
|
4.8.1-1 |
2 |
0.00
|
clustering DNA/protein sequence database at high identity with tolerance |
fbearoff
|
2020-02-09 19:19 (UTC) |
|
cacophony
|
0.1.2-1 |
0 |
0.00
|
A minimalist and ergonomic MIDI sequencer |
grawlinson
|
2023-11-07 00:36 (UTC) |
|
bwa-git
|
v0.7.17.r23.gfbfffc9-2 |
1 |
0.00
|
Burrows-Wheeler Aligner maps low-divergent sequences against a large reference genome |
PumpkinCheshire
|
2021-05-09 11:47 (UTC) |
|
bustle-git
|
0.8.0.r5.gf074e5a-1 |
1 |
0.00
|
Draw sequence diagrams of D-Bus traffic |
codyps
|
2022-05-14 03:41 (UTC) |
|
bslizr-git
|
1.2.8.r0.gf988a45-1 |
0 |
0.00
|
Sequenced audio slicing effect LV2 plugin (git version) |
milkii
|
2020-08-24 23:28 (UTC) |
|
bsequencer-git
|
1.8.0.r0.g8f96f92-1 |
0 |
0.00
|
Multi channel MIDI step sequencer LV2 plugin (git version) |
milkii
|
2020-09-14 21:01 (UTC) |
|
bowtie2-git
|
2.5.3.r0.ga43fa6f-1 |
0 |
0.00
|
Tool for aligning sequencing reads to long reference sequences |
a821
|
2024-03-21 09:27 (UTC) |
|
bowtie2-bin
|
2.5.3-1 |
0 |
0.00
|
Tool for aligning sequencing reads to long reference sequences |
Chocobo1
|
2024-01-17 03:55 (UTC) |
|
bowtie
|
1.3.1-1 |
8 |
0.00
|
Alignment tool for short nucleotide sequences against long templates |
a821
|
2022-10-28 15:22 (UTC) |
|
boops.lv2-git
|
1.2.4.r0.gbdb4de4-1 |
0 |
0.00
|
A glitch effect sequencer LV2 plugin (git version) |
SpotlightKid
|
2021-01-18 15:30 (UTC) |
|
bjumblr.lv2-git
|
1.6.8.r0.geeafe2d-1 |
0 |
0.00
|
A pattern-controlled audio stream re-sequencer LV2 plugin (git version) |
milkii
|
2024-04-26 17:44 (UTC) |
|
bionj
|
1997-1 |
0 |
0.00
|
an improved version of the NJ algorithm based on a simple model of sequence data |
malacology
|
2022-06-01 14:03 (UTC) |
|
pibuss
|
1.10.4-0 |
1 |
0.00
|
a BEAST/BEAGLE utility for sequence simulation, which provides an easy to use interface that allows flexible and extensible phylogenetic data fabrication. https://doi.org/10.1186/1471-2105-15-133 |
malacology
|
2023-05-07 11:21 (UTC) |
|
beagle-lib-opencl
|
4.0.1-1 |
0 |
0.00
|
general purpose library for evaluating the likelihood of sequence evolution on trees (with opencl) |
malacology
|
2023-10-13 18:05 (UTC) |
|
beagle-lib-cuda
|
4.0.1-1 |
0 |
0.00
|
general purpose library for evaluating the likelihood of sequence evolution on trees (with cuda) |
malacology
|
2024-01-17 06:05 (UTC) |
|
beagle-lib-all
|
4.0.1-1 |
0 |
0.00
|
general purpose library for evaluating the likelihood of sequence evolution on trees (with cuda and opencl) |
malacology
|
2024-01-17 06:02 (UTC) |
|
beagle-lib
|
4.0.1-1 |
5 |
0.00
|
general purpose library for evaluating the likelihood of sequence evolution on trees |
malacology
|
2023-10-13 18:06 (UTC) |
|
bdelta-git
|
1:0.3.1.post2+g4782c58_20160919.fefefilesize-1 |
0 |
0.00
|
A tool to create diffs of binary files. A sophisticated sequence matching library bundled with a delta creator and patch tool. |
dreieck
|
2023-10-31 16:31 (UTC) |