r-gesper
|
1.36.0-1 |
0 |
0.00
|
Gene-Specific Phenotype EstimatoR |
BioArchLinuxBot
|
2024-05-03 13:11 (UTC) |
r-phenotest
|
1.52.0-1 |
0 |
0.00
|
Tools to test association between gene expression and phenotype in a way that is efficient, structured, fast and scalable. We also provide tools to do GSEA (Gene set enrichment analysis) and copy number variation. |
BioArchLinuxBot
|
2024-05-03 13:09 (UTC) |
r-sctgif
|
1.18.0-1 |
0 |
0.00
|
Cell type annotation for unannotated single-cell RNA-Seq data |
BioArchLinuxBot
|
2024-05-03 12:53 (UTC) |
r-scider
|
1.2.0-1 |
0 |
0.00
|
Spatial cell-type inter-correlation by density in R |
pekkarr
|
2024-05-03 09:11 (UTC) |
r-ctsv
|
1.6.0-1 |
0 |
0.00
|
Identification of cell-type-specific spatially variable genes accounting for excess zeros |
pekkarr
|
2024-05-03 09:05 (UTC) |
r-survtype
|
1.20.0-1 |
0 |
0.00
|
Subtype Identification with Survival Data |
BioArchLinuxBot
|
2024-05-03 08:05 (UTC) |
r-cnvranger
|
1.20.0-1 |
0 |
0.00
|
Summarization and expression/phenotype association of CNV ranges |
BioArchLinuxBot
|
2024-05-03 07:47 (UTC) |
r-vtpnet
|
0.44.0-1 |
0 |
0.00
|
variant-transcription factor-phenotype networks |
BioArchLinuxBot
|
2024-05-03 05:52 (UTC) |
r-cnvrd2
|
1.42.0-1 |
0 |
0.00
|
CNVrd2: a read depth-based method to detect and genotype complex common copy number variants from next generation sequencing data. |
BioArchLinuxBot
|
2024-05-03 04:38 (UTC) |
r-geotcgadata
|
2.4.0-1 |
0 |
0.00
|
Processing Various Types of Data on GEO and TCGA |
pekkarr
|
2024-05-03 04:13 (UTC) |
r-airpart
|
1.12.0-1 |
0 |
0.00
|
Differential cell-type-specific allelic imbalance |
BioArchLinuxBot
|
2024-05-03 01:50 (UTC) |
r-scannotatr
|
1.10.0-1 |
0 |
0.00
|
Pretrained learning models for cell type prediction on single cell RNA-sequencing data |
BioArchLinuxBot
|
2024-05-02 23:57 (UTC) |
r-treekor
|
1.12.0-1 |
0 |
0.00
|
Cytometry Cluster Hierarchy and Cellular-to-phenotype Associations |
BioArchLinuxBot
|
2024-05-02 23:02 (UTC) |
r-crlmm
|
1.62.0-1 |
0 |
0.00
|
Genotype Calling (CRLMM) and Copy Number Analysis tool for Affymetrix SNP 5.0 and 6.0 and Illumina arrays |
BioArchLinuxBot
|
2024-05-02 22:43 (UTC) |
r-chetah
|
1.20.0-1 |
0 |
0.00
|
Fast and accurate scRNA-seq cell type identification |
BioArchLinuxBot
|
2024-05-02 21:54 (UTC) |
r-ewce
|
1.12.0-1 |
0 |
0.00
|
Expression Weighted Celltype Enrichment |
BioArchLinuxBot
|
2024-05-02 21:44 (UTC) |
r-busseq
|
1.10.0-1 |
0 |
0.00
|
Batch Effect Correction with Unknow Subtypes for scRNA-seq data |
BioArchLinuxBot
|
2024-05-02 21:34 (UTC) |
r-screclassify
|
1.10.0-1 |
0 |
0.00
|
scReClassify: post hoc cell type classification of single-cell RNA-seq data |
BioArchLinuxBot
|
2024-05-02 21:28 (UTC) |
r-mapredictdsc
|
1.42.0-1 |
0 |
0.00
|
Phenotype prediction using microarray data: approach of the best overall team in the IMPROVER Diagnostic Signature Challenge |
BioArchLinuxBot
|
2024-05-02 21:08 (UTC) |
r-islet
|
1.6.0-1 |
0 |
0.00
|
Individual-Specific ceLl typE referencing Tool |
pekkarr
|
2024-05-02 20:03 (UTC) |
r-dune
|
1.16.0-1 |
0 |
0.00
|
Improving replicability in single-cell RNA-Seq cell type discovery |
BioArchLinuxBot
|
2024-05-02 19:38 (UTC) |
r-buscorrect
|
1.22.0-1 |
0 |
0.00
|
Batch Effects Correction with Unknown Subtypes |
BioArchLinuxBot
|
2024-05-02 19:13 (UTC) |
r-panr
|
1.50.0-1 |
0 |
0.00
|
Posterior association networks and functional modules inferred from rich phenotypes of gene perturbations |
BioArchLinuxBot
|
2024-05-02 18:32 (UTC) |
r-hibag
|
1.40.0-1 |
0 |
0.00
|
HLA Genotype Imputation with Attribute Bagging |
BioArchLinuxBot
|
2024-05-02 12:59 (UTC) |
r-methped
|
1.32.0-1 |
0 |
0.00
|
A DNA methylation classifier tool for the identification of pediatric brain tumor subtypes |
BioArchLinuxBot
|
2024-05-02 12:46 (UTC) |
r-stdeconvolve
|
1.8.0-1 |
0 |
0.00
|
Reference-free Cell-Type Deconvolution of Multi-Cellular Spatially Resolved Transcriptomics Data |
pekkarr
|
2024-05-02 05:21 (UTC) |
r-gcatest
|
2.4.0-1 |
0 |
0.00
|
Genotype Conditional Association TEST |
BioArchLinuxBot
|
2024-05-02 05:19 (UTC) |
r-pfamanalyzer
|
1.4.0-1 |
0 |
0.00
|
Identification of domain isotypes in pfam data |
pekkarr
|
2024-05-02 04:52 (UTC) |
r-gigsea
|
1.22.0-1 |
0 |
0.00
|
Genotype Imputed Gene Set Enrichment Analysis |
BioArchLinuxBot
|
2024-05-02 04:38 (UTC) |
r-rlmm
|
1.66.0-1 |
0 |
0.00
|
A Genotype Calling Algorithm for Affymetrix SNP Arrays |
BioArchLinuxBot
|
2024-05-02 04:16 (UTC) |
r-typeinfo
|
1.70.0-1 |
0 |
0.00
|
Optional Type Specification Prototype |
BioArchLinuxBot
|
2024-05-02 03:50 (UTC) |
r-iclusterplus
|
1.40.0-1 |
0 |
0.00
|
Integrative clustering of multi-type genomic data |
BioArchLinuxBot
|
2024-05-02 03:10 (UTC) |
r-lrcell
|
1.12.0-1 |
0 |
0.00
|
Differential cell type change analysis using Logistic/linear Regression |
BioArchLinuxBot
|
2024-05-02 02:56 (UTC) |
r-siamcat
|
2.8.0-1 |
0 |
0.00
|
Statistical Inference of Associations between Microbial Communities And host phenoTypes |
BioArchLinuxBot
|
2024-05-02 01:44 (UTC) |
r-packfinder
|
1.16.0-1 |
0 |
0.00
|
de novo Annotation of Pack-TYPE Transposable Elements |
BioArchLinuxBot
|
2024-05-02 00:25 (UTC) |
python-pyjacklib
|
0.1.1-4 |
1 |
0.00
|
Python bindings for libjack using ctypes |
SpotlightKid
|
2024-05-01 23:58 (UTC) |
r-diggit
|
1.36.0-1 |
0 |
0.00
|
Inference of Genetic Variants Driving Cellular Phenotypes |
BioArchLinuxBot
|
2024-05-01 23:58 (UTC) |
r-phenogeneranker
|
1.12.0-1 |
0 |
0.00
|
PhenoGeneRanker: A gene and phenotype prioritization tool |
BioArchLinuxBot
|
2024-05-01 23:41 (UTC) |
r-beachmat
|
2.20.0-1 |
0 |
0.00
|
Compiling Bioconductor to Handle Each Matrix Type |
BioArchLinuxBot
|
2024-05-01 22:32 (UTC) |
r-chromdraw
|
2.34.0-1 |
0 |
0.00
|
chromDraw is a R package for drawing the schemes of karyotypes in the linear and circular fashion. |
BioArchLinuxBot
|
2024-05-01 22:16 (UTC) |
r-openstats
|
1.16.0-1 |
0 |
0.00
|
A Robust and Scalable Software Package for Reproducible Analysis of High-Throughput genotype-phenotype association |
BioArchLinuxBot
|
2024-05-01 21:42 (UTC) |
r-desingle
|
1.24.0-1 |
0 |
0.00
|
DEsingle for detecting three types of differential expression in single-cell RNA-seq data |
BioArchLinuxBot
|
2024-05-01 19:48 (UTC) |
r-pcan
|
1.32.0-1 |
0 |
0.00
|
Phenotype Consensus ANalysis (PCAN) |
BioArchLinuxBot
|
2024-05-01 19:48 (UTC) |
r-aroma.light
|
3.34.0-1 |
0 |
0.00
|
Light-Weight Methods for Normalization and Visualization of Microarray Data using Only Basic R Data Types |
BioArchLinuxBot
|
2024-05-01 19:01 (UTC) |
r-hireewas
|
1.22.0-1 |
0 |
0.00
|
Detection of cell-type-specific risk-CpG sites in epigenome-wide association studies |
BioArchLinuxBot
|
2024-05-01 18:52 (UTC) |
r-asset
|
2.22.0-1 |
0 |
0.00
|
An R package for subset-based association analysis of heterogeneous traits and subtypes |
BioArchLinuxBot
|
2024-05-01 18:30 (UTC) |
r-aims
|
1.36.0-1 |
0 |
0.00
|
AIMS : Absolute Assignment of Breast Cancer Intrinsic Molecular Subtype |
BioArchLinuxBot
|
2024-05-01 18:08 (UTC) |
r-cellmapper
|
1.30.0-1 |
0 |
0.00
|
Predict genes expressed selectively in specific cell types |
BioArchLinuxBot
|
2024-05-01 18:05 (UTC) |
nautilus-typeahead
|
46.1-1 |
45 |
0.08
|
Default file manager for GNOME - Patched to bring back the 'typeahead find' feature |
albertvaka
|
2024-05-01 16:47 (UTC) |
libnautilus-extension-typeahead
|
46.1-1 |
45 |
0.08
|
Extension interface for Nautilus |
albertvaka
|
2024-05-01 16:47 (UTC) |