1641 packages found. Page 4 of 33.

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Name Version Votes Popularity? Description Maintainer Last Updated
r-phenotest 1.52.0-1 0 0.00 Tools to test association between gene expression and phenotype in a way that is efficient, structured, fast and scalable. We also provide tools to do GSEA (Gene set enrichment analysis) and copy number variation. BioArchLinuxBot 2024-05-03 13:09 (UTC)
r-sctgif 1.18.0-1 0 0.00 Cell type annotation for unannotated single-cell RNA-Seq data BioArchLinuxBot 2024-05-03 12:53 (UTC)
r-scider 1.2.0-1 0 0.00 Spatial cell-type inter-correlation by density in R pekkarr 2024-05-03 09:11 (UTC)
r-ctsv 1.6.0-1 0 0.00 Identification of cell-type-specific spatially variable genes accounting for excess zeros pekkarr 2024-05-03 09:05 (UTC)
r-survtype 1.20.0-1 0 0.00 Subtype Identification with Survival Data BioArchLinuxBot 2024-05-03 08:05 (UTC)
r-cnvranger 1.20.0-1 0 0.00 Summarization and expression/phenotype association of CNV ranges BioArchLinuxBot 2024-05-03 07:47 (UTC)
r-vtpnet 0.44.0-1 0 0.00 variant-transcription factor-phenotype networks BioArchLinuxBot 2024-05-03 05:52 (UTC)
r-cnvrd2 1.42.0-1 0 0.00 CNVrd2: a read depth-based method to detect and genotype complex common copy number variants from next generation sequencing data. BioArchLinuxBot 2024-05-03 04:38 (UTC)
r-geotcgadata 2.4.0-1 0 0.00 Processing Various Types of Data on GEO and TCGA pekkarr 2024-05-03 04:13 (UTC)
r-airpart 1.12.0-1 0 0.00 Differential cell-type-specific allelic imbalance BioArchLinuxBot 2024-05-03 01:50 (UTC)
r-scannotatr 1.10.0-1 0 0.00 Pretrained learning models for cell type prediction on single cell RNA-sequencing data BioArchLinuxBot 2024-05-02 23:57 (UTC)
r-treekor 1.12.0-1 0 0.00 Cytometry Cluster Hierarchy and Cellular-to-phenotype Associations BioArchLinuxBot 2024-05-02 23:02 (UTC)
r-crlmm 1.62.0-1 0 0.00 Genotype Calling (CRLMM) and Copy Number Analysis tool for Affymetrix SNP 5.0 and 6.0 and Illumina arrays BioArchLinuxBot 2024-05-02 22:43 (UTC)
r-chetah 1.20.0-1 0 0.00 Fast and accurate scRNA-seq cell type identification BioArchLinuxBot 2024-05-02 21:54 (UTC)
r-ewce 1.12.0-1 0 0.00 Expression Weighted Celltype Enrichment BioArchLinuxBot 2024-05-02 21:44 (UTC)
r-busseq 1.10.0-1 0 0.00 Batch Effect Correction with Unknow Subtypes for scRNA-seq data BioArchLinuxBot 2024-05-02 21:34 (UTC)
r-screclassify 1.10.0-1 0 0.00 scReClassify: post hoc cell type classification of single-cell RNA-seq data BioArchLinuxBot 2024-05-02 21:28 (UTC)
r-mapredictdsc 1.42.0-1 0 0.00 Phenotype prediction using microarray data: approach of the best overall team in the IMPROVER Diagnostic Signature Challenge BioArchLinuxBot 2024-05-02 21:08 (UTC)
r-islet 1.6.0-1 0 0.00 Individual-Specific ceLl typE referencing Tool pekkarr 2024-05-02 20:03 (UTC)
r-dune 1.16.0-1 0 0.00 Improving replicability in single-cell RNA-Seq cell type discovery BioArchLinuxBot 2024-05-02 19:38 (UTC)
r-buscorrect 1.22.0-1 0 0.00 Batch Effects Correction with Unknown Subtypes BioArchLinuxBot 2024-05-02 19:13 (UTC)
r-panr 1.50.0-1 0 0.00 Posterior association networks and functional modules inferred from rich phenotypes of gene perturbations BioArchLinuxBot 2024-05-02 18:32 (UTC)
r-hibag 1.40.0-1 0 0.00 HLA Genotype Imputation with Attribute Bagging BioArchLinuxBot 2024-05-02 12:59 (UTC)
r-methped 1.32.0-1 0 0.00 A DNA methylation classifier tool for the identification of pediatric brain tumor subtypes BioArchLinuxBot 2024-05-02 12:46 (UTC)
r-stdeconvolve 1.8.0-1 0 0.00 Reference-free Cell-Type Deconvolution of Multi-Cellular Spatially Resolved Transcriptomics Data pekkarr 2024-05-02 05:21 (UTC)
r-gcatest 2.4.0-1 0 0.00 Genotype Conditional Association TEST BioArchLinuxBot 2024-05-02 05:19 (UTC)
r-pfamanalyzer 1.4.0-1 0 0.00 Identification of domain isotypes in pfam data pekkarr 2024-05-02 04:52 (UTC)
r-gigsea 1.22.0-1 0 0.00 Genotype Imputed Gene Set Enrichment Analysis BioArchLinuxBot 2024-05-02 04:38 (UTC)
r-rlmm 1.66.0-1 0 0.00 A Genotype Calling Algorithm for Affymetrix SNP Arrays BioArchLinuxBot 2024-05-02 04:16 (UTC)
r-typeinfo 1.70.0-1 0 0.00 Optional Type Specification Prototype BioArchLinuxBot 2024-05-02 03:50 (UTC)
r-iclusterplus 1.40.0-1 0 0.00 Integrative clustering of multi-type genomic data BioArchLinuxBot 2024-05-02 03:10 (UTC)
r-lrcell 1.12.0-1 0 0.00 Differential cell type change analysis using Logistic/linear Regression BioArchLinuxBot 2024-05-02 02:56 (UTC)
r-siamcat 2.8.0-1 0 0.00 Statistical Inference of Associations between Microbial Communities And host phenoTypes BioArchLinuxBot 2024-05-02 01:44 (UTC)
r-packfinder 1.16.0-1 0 0.00 de novo Annotation of Pack-TYPE Transposable Elements BioArchLinuxBot 2024-05-02 00:25 (UTC)
python-pyjacklib 0.1.1-4 1 0.00 Python bindings for libjack using ctypes SpotlightKid 2024-05-01 23:58 (UTC)
r-diggit 1.36.0-1 0 0.00 Inference of Genetic Variants Driving Cellular Phenotypes BioArchLinuxBot 2024-05-01 23:58 (UTC)
r-phenogeneranker 1.12.0-1 0 0.00 PhenoGeneRanker: A gene and phenotype prioritization tool BioArchLinuxBot 2024-05-01 23:41 (UTC)
r-beachmat 2.20.0-1 0 0.00 Compiling Bioconductor to Handle Each Matrix Type BioArchLinuxBot 2024-05-01 22:32 (UTC)
r-chromdraw 2.34.0-1 0 0.00 chromDraw is a R package for drawing the schemes of karyotypes in the linear and circular fashion. BioArchLinuxBot 2024-05-01 22:16 (UTC)
r-openstats 1.16.0-1 0 0.00 A Robust and Scalable Software Package for Reproducible Analysis of High-Throughput genotype-phenotype association BioArchLinuxBot 2024-05-01 21:42 (UTC)
r-desingle 1.24.0-1 0 0.00 DEsingle for detecting three types of differential expression in single-cell RNA-seq data BioArchLinuxBot 2024-05-01 19:48 (UTC)
r-pcan 1.32.0-1 0 0.00 Phenotype Consensus ANalysis (PCAN) BioArchLinuxBot 2024-05-01 19:48 (UTC)
r-aroma.light 3.34.0-1 0 0.00 Light-Weight Methods for Normalization and Visualization of Microarray Data using Only Basic R Data Types BioArchLinuxBot 2024-05-01 19:01 (UTC)
r-hireewas 1.22.0-1 0 0.00 Detection of cell-type-specific risk-CpG sites in epigenome-wide association studies BioArchLinuxBot 2024-05-01 18:52 (UTC)
r-asset 2.22.0-1 0 0.00 An R package for subset-based association analysis of heterogeneous traits and subtypes BioArchLinuxBot 2024-05-01 18:30 (UTC)
r-aims 1.36.0-1 0 0.00 AIMS : Absolute Assignment of Breast Cancer Intrinsic Molecular Subtype BioArchLinuxBot 2024-05-01 18:08 (UTC)
r-cellmapper 1.30.0-1 0 0.00 Predict genes expressed selectively in specific cell types BioArchLinuxBot 2024-05-01 18:05 (UTC)
nautilus-typeahead 46.1-1 45 0.08 Default file manager for GNOME - Patched to bring back the 'typeahead find' feature albertvaka 2024-05-01 16:47 (UTC)
libnautilus-extension-typeahead 46.1-1 45 0.08 Extension interface for Nautilus albertvaka 2024-05-01 16:47 (UTC)
freetype-gl 20240429-2 0 0.00 OpenGL text using one vertex buffer, one texture and FreeType Rubo 2024-04-30 14:02 (UTC)

1641 packages found. Page 4 of 33.

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