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author | BioArchLinuxBot | 2024-05-08 18:04:48 +0000 |
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committer | BioArchLinuxBot | 2024-05-08 18:04:48 +0000 |
commit | 5b8834f858c0b06d2ed71d9e47f36880c9c6b2c7 (patch) | |
tree | dbe42d98788c4c6da810694d5d8ce47ac2420520 | |
parent | 1044cf641ab8ec482c1422e11d772d92f5f8d4f5 (diff) | |
download | aur-r-epitxdb.tar.gz |
[lilac] updated to 1.16.0-1
-rw-r--r-- | .SRCINFO | 12 | ||||
-rw-r--r-- | PKGBUILD | 26 |
2 files changed, 21 insertions, 17 deletions
@@ -1,11 +1,10 @@ pkgbase = r-epitxdb pkgdesc = Storing and accessing epitranscriptomic information using the AnnotationDbi interface - pkgver = 1.14.1 + pkgver = 1.16.0 pkgrel = 1 url = https://bioconductor.org/packages/EpiTxDb arch = any - license = Artistic2.0 - depends = r + license = Artistic-2.0 depends = r-annotationdbi depends = r-biocfilecache depends = r-biocgenerics @@ -18,9 +17,11 @@ pkgbase = r-epitxdb depends = r-httr depends = r-iranges depends = r-modstrings + depends = r-rex depends = r-rsqlite depends = r-s4vectors depends = r-trnadbimport + depends = r-txdbmaker depends = r-xml2 optdepends = r-annotationhub optdepends = r-biocstyle @@ -34,7 +35,8 @@ pkgbase = r-epitxdb optdepends = r-rmarkdown optdepends = r-testthat optdepends = r-txdb.hsapiens.ucsc.hg38.knowngene - source = https://bioconductor.org/packages/release/bioc/src/contrib/EpiTxDb_1.14.1.tar.gz - sha256sums = ad425f358f3cd7b31efb8c29069b204bd9b83d90cf13638dd92f704826c78762 + source = https://bioconductor.org/packages/release/bioc/src/contrib/EpiTxDb_1.16.0.tar.gz + md5sums = 20e35a30fee32809fda75ba666f36a8c + b2sums = ba8bf305321b12954444d77c2f46b35b1bccfb6e5f7da515192c9dde0fcecee8b2f8055f6dc4b9dcec8ee29f4a9a4472b4a9d82867135c600832ca7e7fc66b5d pkgname = r-epitxdb @@ -1,16 +1,15 @@ # Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> _pkgname=EpiTxDb -_pkgver=1.14.1 +_pkgver=1.16.0 pkgname=r-${_pkgname,,} -pkgver=1.14.1 +pkgver=${_pkgver//-/.} pkgrel=1 -pkgdesc='Storing and accessing epitranscriptomic information using the AnnotationDbi interface' -arch=('any') -url="https://bioconductor.org/packages/${_pkgname}" -license=('Artistic2.0') +pkgdesc="Storing and accessing epitranscriptomic information using the AnnotationDbi interface" +arch=(any) +url="https://bioconductor.org/packages/$_pkgname" +license=('Artistic-2.0') depends=( - r r-annotationdbi r-biocfilecache r-biocgenerics @@ -23,9 +22,11 @@ depends=( r-httr r-iranges r-modstrings + r-rex r-rsqlite r-s4vectors r-trnadbimport + r-txdbmaker r-xml2 ) optdepends=( @@ -43,14 +44,15 @@ optdepends=( r-txdb.hsapiens.ucsc.hg38.knowngene ) source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") -sha256sums=('ad425f358f3cd7b31efb8c29069b204bd9b83d90cf13638dd92f704826c78762') +md5sums=('20e35a30fee32809fda75ba666f36a8c') +b2sums=('ba8bf305321b12954444d77c2f46b35b1bccfb6e5f7da515192c9dde0fcecee8b2f8055f6dc4b9dcec8ee29f4a9a4472b4a9d82867135c600832ca7e7fc66b5d') build() { - R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" + mkdir build + R CMD INSTALL -l build "$_pkgname" } package() { - install -dm0755 "${pkgdir}/usr/lib/R/library" - cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" + install -d "$pkgdir/usr/lib/R/library" + cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library" } -# vim:set ts=2 sw=2 et: |