[lilac] updated to 3.2.0-3

1 files changed, 8 insertions, 4 deletions

diff --git a/PKGBUILD b/PKGBUILD
index 7be48e98a730..fca3c1190e61 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -2,23 +2,27 @@
 
 pkgname=preseq
 pkgver=3.2.0
-pkgrel=1
+pkgrel=3
 pkgdesc="A tool for predicting and estimating the complexity of a genomic sequencing library, equivalent to predicting and estimating the number of redundant reads from a given sequencing depth."
 arch=('x86_64')
 url="http://smithlabresearch.org/software/preseq/"
 depends=('gsl' 'htslib')
 makedepends=('make')
 license=('GPL3')
-source=("https://github.com/smithlabcode/preseq/releases/download/v${pkgver}/preseq-${pkgver}.tar.gz")
-md5sums=('293486920e3f6fcdab2418b8413f9cbd')
+source=("https://github.com/smithlabcode/preseq/releases/download/v${pkgver}/preseq-${pkgver}.tar.gz"
+	"$pkgname-3.2.0.patch")
+md5sums=('293486920e3f6fcdab2418b8413f9cbd'
+         '56a5e2d72618d28f45ac001857fe4a7c')
 
 prepare() {
   cd "${pkgname}-${pkgver}"
-  ./configure --prefix="${pkgdir}/usr" --enable-hts
+  cd src/smithlab_cpp
+  patch -p1 < $srcdir/$pkgname-3.2.0.patch 
 }
 
 build() {
   cd "${pkgname}-${pkgver}"
+  ./configure --prefix="${pkgdir}/usr" --enable-hts
   make all
 }