diff options
Diffstat (limited to 'PKGBUILD')
-rw-r--r-- | PKGBUILD | 12 |
1 files changed, 8 insertions, 4 deletions
@@ -2,23 +2,27 @@ pkgname=preseq pkgver=3.2.0 -pkgrel=1 +pkgrel=3 pkgdesc="A tool for predicting and estimating the complexity of a genomic sequencing library, equivalent to predicting and estimating the number of redundant reads from a given sequencing depth." arch=('x86_64') url="http://smithlabresearch.org/software/preseq/" depends=('gsl' 'htslib') makedepends=('make') license=('GPL3') -source=("https://github.com/smithlabcode/preseq/releases/download/v${pkgver}/preseq-${pkgver}.tar.gz") -md5sums=('293486920e3f6fcdab2418b8413f9cbd') +source=("https://github.com/smithlabcode/preseq/releases/download/v${pkgver}/preseq-${pkgver}.tar.gz" + "$pkgname-3.2.0.patch") +md5sums=('293486920e3f6fcdab2418b8413f9cbd' + '56a5e2d72618d28f45ac001857fe4a7c') prepare() { cd "${pkgname}-${pkgver}" - ./configure --prefix="${pkgdir}/usr" --enable-hts + cd src/smithlab_cpp + patch -p1 < $srcdir/$pkgname-3.2.0.patch } build() { cd "${pkgname}-${pkgver}" + ./configure --prefix="${pkgdir}/usr" --enable-hts make all } |