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| author | BioArchLinuxBot | 2024-05-10 18:11:11 +0000 |
|---|---|---|
| committer | BioArchLinuxBot | 2024-05-10 18:11:11 +0000 |
| commit | f670380ab71736750d7da158f97fcdcc1f4cd651 (patch) | |
| tree | 913cd0940a7eebf06a922fcb416bdd551cd1131c /fix-test-snapshot.patch | |
| parent | f14366a4c774ad400313e3304ace08cfda567674 (diff) | |
| download | aur-r-mariner.tar.gz | |
[lilac] updated to 1.4.0-1
Diffstat (limited to 'fix-test-snapshot.patch')
| -rw-r--r-- | fix-test-snapshot.patch | 64 |
1 files changed, 64 insertions, 0 deletions
diff --git a/fix-test-snapshot.patch b/fix-test-snapshot.patch index 9359df6e98fe..98f0098be528 100644 --- a/fix-test-snapshot.patch +++ b/fix-test-snapshot.patch @@ -65,3 +65,67 @@ index 492df25..e6645e7 100644 ,,1,FS [,1] [,2] [,3] ... [,10] [,11] [1,] 0 0 0 . 0 0 +diff --git a/mariner/tests/testthat/_snaps/MergedGInteractions.md b/mariner/tests/testthat/_snaps/MergedGInteractions.md +index f27c0ed..999e149 100644 +--- a/mariner/tests/testthat/_snaps/MergedGInteractions.md ++++ b/mariner/tests/testthat/_snaps/MergedGInteractions.md +@@ -4,6 +4,7 @@ + .mapIds(x) + Output + seqnames1 start1 end1 width1 strand1 seqnames2 start2 end2 ++ <fctr> <int> <int> <int> <fctr> <fctr> <int> <int> + 1: chr9 118645000 118650000 5001 * chr9 119330000 119335000 + 2: chr9 118645000 118650000 5001 * chr9 119330000 119335000 + 3: chr17 80635000 80640000 5001 * chr17 80920000 80925000 +@@ -12,16 +13,18 @@ + 6: chr9 14460000 14465000 5001 * chr9 14765000 14770000 + 7: chr17 47645000 47650000 5001 * chr17 48075000 48080000 + 8: chr17 47645000 47650000 5001 * chr17 48075000 48080000 +- width2 strand2 color APScoreAvg ProbabilityofEnrichment RegAPScoreAvg +- 1: 5001 * 0,0,0 2.611034 0.9860443 1.414376 +- 2: 5001 * 0,0,0 2.611034 0.9860443 1.414376 +- 3: 5001 * 0,0,0 2.889573 0.9713564 1.379367 +- 4: 5001 * 0,0,0 2.889573 0.9713564 1.379367 +- 5: 5001 * 0,0,0 3.272132 0.9868535 2.233533 +- 6: 5001 * 0,0,0 3.272132 0.9868535 2.233533 +- 7: 5001 * 0,0,0 3.520431 0.9801694 2.433166 +- 8: 5001 * 0,0,0 3.520431 0.9801694 2.433166 ++ width2 strand2 color APScoreAvg ProbabilityofEnrichment RegAPScoreAvg ++ <int> <fctr> <char> <num> <num> <num> ++ 1: 5001 * 0,0,0 2.611034 0.9860443 1.414376 ++ 2: 5001 * 0,0,0 2.611034 0.9860443 1.414376 ++ 3: 5001 * 0,0,0 2.889573 0.9713564 1.379367 ++ 4: 5001 * 0,0,0 2.889573 0.9713564 1.379367 ++ 5: 5001 * 0,0,0 3.272132 0.9868535 2.233533 ++ 6: 5001 * 0,0,0 3.272132 0.9868535 2.233533 ++ 7: 5001 * 0,0,0 3.520431 0.9801694 2.433166 ++ 8: 5001 * 0,0,0 3.520431 0.9801694 2.433166 + Avg_diffMaxNeihgboor_1 Avg_diffMaxNeihgboor_2 avg std value ++ <num> <num> <num> <num> <num> + 1: 1.8755854 2.121637 2.605124 0.7942202 4.272311 + 2: 1.8755854 2.121637 2.605124 0.7942202 4.272311 + 3: 1.9105295 1.946362 1.854944 0.6729783 3.553193 +@@ -30,13 +33,14 @@ + 6: 1.0059373 1.645508 3.437883 0.5164226 4.332049 + 7: 0.8104557 1.486894 3.200528 0.6733462 3.920933 + 8: 0.8104557 1.486894 3.200528 0.6733462 3.920933 +- src id grp clst i.id +- 1: FS 1 1 1 1 +- 2: FS 5 1 1 1 +- 3: FS 2 2 1 2 +- 4: FS 6 2 1 2 +- 5: WT 3 1 2 3 +- 6: WT 7 1 2 3 +- 7: WT 4 2 2 4 +- 8: WT 8 2 2 4 ++ src id grp clst i.id ++ <char> <int> <int> <int> <int> ++ 1: FS 1 1 1 1 ++ 2: FS 5 1 1 1 ++ 3: FS 2 2 1 2 ++ 4: FS 6 2 1 2 ++ 5: WT 3 1 2 3 ++ 6: WT 7 1 2 3 ++ 7: WT 4 2 2 4 ++ 8: WT 8 2 2 4 + |