diff options
Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 28 |
1 files changed, 15 insertions, 13 deletions
@@ -1,16 +1,15 @@ # Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> _pkgname=clustifyr -_pkgver=1.14.0 +_pkgver=1.16.0 pkgname=r-${_pkgname,,} -pkgver=1.14.0 +pkgver=${_pkgver//-/.} pkgrel=1 -pkgdesc='Classifier for Single-cell RNA-seq Using Cell Clusters' -arch=('any') -url="https://bioconductor.org/packages/${_pkgname}" +pkgdesc="Classifier for Single-cell RNA-seq Using Cell Clusters" +arch=(any) +url="https://bioconductor.org/packages/$_pkgname" license=('MIT') depends=( - r r-cowplot r-dplyr r-entropy @@ -22,6 +21,7 @@ depends=( r-rlang r-s4vectors r-scales + r-seuratobject r-singlecellexperiment r-stringr r-summarizedexperiment @@ -41,20 +41,22 @@ optdepends=( r-r.utils r-remotes r-rmarkdown - r-seurat r-shiny r-testthat ) source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") -sha256sums=('f6ea4930a9179e9ea79423361d2841b027c58785a84c7ee2e29a9da51497d731') +md5sums=('e636ea159b4fe186b37a723f523395d0') +b2sums=('f8d280fb46591d82825ad306c3aee5c54d33af416c0c842f44d13cb10b34de69b9acaf441a8662ec7964a2fb6433672fc21e89c2afcd315ddf5b76b81b05076a') build() { - R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" + mkdir build + R CMD INSTALL -l build "$_pkgname" } package() { - install -dm0755 "${pkgdir}/usr/lib/R/library" - cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" - install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}" + install -d "$pkgdir/usr/lib/R/library" + cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library" + + install -d "$pkgdir/usr/share/licenses/$pkgname" + ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname" } -# vim:set ts=2 sw=2 et: |