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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=GOSemSim
_pkgver=2.30.2
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="GO-terms Semantic Similarity Measures"
arch=(x86_64)
url="https://bioconductor.org/packages/$_pkgname"
license=('Artistic-2.0')
depends=(
r-annotationdbi
r-dbi
r-digest
r-go.db
r-httr2
r-r.utils
r-rlang
r-yulab.utils
)
makedepends=(
r-rcpp
)
optdepends=(
r-annotationhub
r-biocmanager
r-clusterprofiler
r-dose
r-knitr
r-org.hs.eg.db
r-prettydoc
r-rappdirs
r-readr
r-rmarkdown
r-rocr
r-testthat
r-tidyr
r-tidyselect
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('e69d41b74ff770e54f06d84bf33565da')
b2sums=('2c6b17e8d2465835a55f95d4f1c3fffa6539edd98c03ae7abed83dd57b16e92e079c682c6df9c770f065ff9f3a28d3e0c70c4fab4508a8d1a0ed6311cc0d1a61')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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