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# system requirements: HMMER3
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=MethTargetedNGS
_pkgver=1.34.0
pkgname=r-${_pkgname,,}
pkgver=1.34.0
pkgrel=1
pkgdesc='Perform Methylation Analysis on Next Generation Sequencing Data'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('Artistic2.0')
depends=(
r
r-biostrings
r-gplots
r-seqinr
r-stringr
hmmer
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('8cef3643e99f5f79706f68d542e73be6a964649f7b382c66e9b8f08be3fd4817')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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