blob: 3e03625f82489b55c996d8c43d1c6847e95e878d (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=TissueEnrich
_pkgver=1.24.1
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Tissue-specific gene enrichment analysis"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('MIT')
depends=(
r-dplyr
r-ggplot2
r-gseabase
r-summarizedexperiment
r-tidyr
)
optdepends=(
r-knitr
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('dd520f8d4fe7eb07073f64f2df777dad')
b2sums=('c73ce8666f4ea1a659de0cc8d4ab5a5ab027c7bc2d15e0dbf4e7c73701116460406e9903dfdc84ac3f60f246077b243d9795f2e77d75d1d69452213158a2ce74')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
install -d "$pkgdir/usr/share/licenses/$pkgname"
ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname"
}
|