|
r-tweedeseq
|
1.48.0-3 |
0 |
0.00
|
RNA-seq data analysis using the Poisson-Tweedie family of distributions |
BioArchLinuxBot
|
2023-10-27 04:29 (UTC) |
|
r-trna
|
1.20.1-1 |
0 |
0.00
|
Analyzing tRNA sequences and structures |
BioArchLinuxBot
|
2024-01-20 00:04 (UTC) |
|
r-triplex
|
1.42.0-1 |
0 |
0.00
|
Search and visualize intramolecular triplex-forming sequences in DNA |
BioArchLinuxBot
|
2023-10-26 03:06 (UTC) |
|
r-tress
|
1.8.0-1 |
0 |
0.00
|
Toolbox for mRNA epigenetics sequencing analysis |
BioArchLinuxBot
|
2023-10-27 10:24 (UTC) |
|
r-treg
|
1.6.0-1 |
0 |
0.00
|
Tools for finding Total RNA Expression Genes in single nucleus RNA-seq data |
pekkarr
|
2023-12-13 15:29 (UTC) |
|
r-transview
|
1.46.0-1 |
0 |
0.00
|
Read density map construction and accession. Visualization of ChIPSeq and RNASeq data sets |
BioArchLinuxBot
|
2023-10-26 02:29 (UTC) |
|
r-transcriptr
|
1.30.0-1 |
0 |
0.00
|
An Integrative Tool for ChIP- And RNA-Seq Based Primary Transcripts Detection and Quantification |
BioArchLinuxBot
|
2023-10-28 14:28 (UTC) |
|
r-traminer
|
2.2.4-1 |
0 |
0.00
|
Trajectory Miner: a Toolbox for Exploring and Rendering Sequences |
orphan
|
2022-06-25 12:26 (UTC) |
|
r-tradeseq
|
1.16.0-1 |
0 |
0.00
|
trajectory-based differential expression analysis for sequencing data |
BioArchLinuxBot
|
2023-10-28 14:17 (UTC) |
|
r-tomoseqr
|
1.6.0-3 |
0 |
0.00
|
R Package for Analyzing Tomo-seq Data |
pekkarr
|
2024-04-25 23:04 (UTC) |
|
r-tomoda
|
1.12.0-1 |
0 |
0.00
|
Tomo-seq data analysis |
BioArchLinuxBot
|
2023-10-27 06:31 (UTC) |
|
r-titancna
|
1.40.0-1 |
0 |
0.00
|
Subclonal copy number and LOH prediction from whole genome sequencing of tumours |
BioArchLinuxBot
|
2023-10-27 12:41 (UTC) |
|
r-tenxplore
|
1.24.0-1 |
0 |
0.00
|
ontological exploration of scRNA-seq of 1.3 million mouse neurons from 10x genomics |
pekkarr
|
2023-10-28 13:55 (UTC) |
|
r-tcseq
|
1.26.0-1 |
0 |
0.00
|
Time course sequencing data analysis |
BioArchLinuxBot
|
2023-10-27 07:33 (UTC) |
|
r-tbsignatureprofiler
|
1.14.0-1 |
0 |
0.00
|
Profile RNA-Seq Data Using TB Pathway Signatures |
BioArchLinuxBot
|
2023-10-30 18:35 (UTC) |
|
r-targetscore
|
1.40.0-2 |
0 |
0.00
|
Infer microRNA targets using microRNA-overexpression data and sequence information |
BioArchLinuxBot
|
2024-04-07 18:13 (UTC) |
|
r-tapseq
|
1.14.1-1 |
0 |
0.00
|
Targeted scRNA-seq primer design for TAP-seq |
BioArchLinuxBot
|
2023-11-09 00:02 (UTC) |
|
r-synmut
|
1.18.0-1 |
0 |
0.00
|
SynMut: Designing Synonymously Mutated Sequences with Different Genomic Signatures |
BioArchLinuxBot
|
2023-10-26 02:45 (UTC) |
|
r-subseq
|
1.32.0-1 |
0 |
0.00
|
Subsampling of high-throughput sequencing count data |
BioArchLinuxBot
|
2023-10-25 23:19 (UTC) |
|
r-ssviz
|
1.36.0-1 |
0 |
0.00
|
A small RNA-seq visualizer and analysis toolkit |
BioArchLinuxBot
|
2023-10-26 03:23 (UTC) |
|
r-sseq
|
1.40.0-1 |
0 |
0.00
|
Shrinkage estimation of dispersion in Negative Binomial models for RNA-seq experiments with small sample size |
BioArchLinuxBot
|
2023-10-25 19:50 (UTC) |
|
r-srnadiff
|
1.22.2-1 |
0 |
0.00
|
Finding differentially expressed unannotated genomic regions from RNA-seq data |
BioArchLinuxBot
|
2024-03-12 00:11 (UTC) |
|
r-spsimseq
|
1.12.0-1 |
0 |
0.00
|
Semi-parametric simulation tool for bulk and single-cell RNA sequencing data |
BioArchLinuxBot
|
2023-10-28 14:51 (UTC) |
|
r-spp
|
1.16.0-7 |
0 |
0.00
|
ChIP-Seq Processing Pipeline |
BioArchLinuxBot
|
2022-11-26 13:51 (UTC) |
|
r-splicinggraphs
|
1.42.0-1 |
0 |
0.00
|
Create, manipulate, visualize splicing graphs, and assign RNA-seq reads to them |
BioArchLinuxBot
|
2023-10-28 12:31 (UTC) |
|
r-splatter
|
1.26.0-1 |
0 |
0.00
|
Simple Simulation of Single-cell RNA Sequencing Data |
BioArchLinuxBot
|
2023-10-27 09:52 (UTC) |
|
r-speckle
|
1.2.0-1 |
0 |
0.00
|
Statistical methods for analysing single cell RNA-seq data |
pekkarr
|
2023-11-14 17:41 (UTC) |
|
r-somnibus
|
1.10.0-1 |
0 |
0.00
|
Smooth modeling of bisulfite sequencing |
BioArchLinuxBot
|
2023-11-03 12:05 (UTC) |
|
r-soggi
|
1.34.0-1 |
0 |
0.00
|
Visualise ChIP-seq, MNase-seq and motif occurrence as aggregate plots Summarised Over Grouped Genomic Intervals |
BioArchLinuxBot
|
2023-10-27 11:47 (UTC) |
|
r-slingshot
|
2.10.0-1 |
0 |
0.00
|
Tools for ordering single-cell sequencing |
BioArchLinuxBot
|
2023-10-28 13:51 (UTC) |
|
r-slalom
|
1.24.0-1 |
0 |
0.00
|
Factorial Latent Variable Modeling of Single-Cell RNA-Seq Data |
BioArchLinuxBot
|
2023-10-27 08:13 (UTC) |
|
r-sipsic
|
1.2.2-1 |
0 |
0.00
|
Calculate Pathway Scores for Each Cell in scRNA-Seq Data |
pekkarr
|
2024-01-26 00:05 (UTC) |
|
r-singler
|
2.4.1-1 |
0 |
0.00
|
Reference-Based Single-Cell RNA-Seq Annotation |
BioArchLinuxBot
|
2024-01-09 00:14 (UTC) |
|
r-singlecelltk
|
2.12.2-1 |
0 |
0.00
|
Comprehensive and Interactive Analysis of Single Cell RNA-Seq Data |
BioArchLinuxBot
|
2024-02-11 00:12 (UTC) |
|
r-singlecellsignalr
|
1.14.0-1 |
0 |
0.00
|
Cell Signalling Using Single Cell RNAseq Data Analysis |
BioArchLinuxBot
|
2023-10-30 18:47 (UTC) |
|
r-single
|
1.6.0-1 |
0 |
0.00
|
Accurate consensus sequence from nanopore reads of a gene library |
pekkarr
|
2023-12-13 11:35 (UTC) |
|
r-sincell
|
1.34.0-1 |
0 |
0.00
|
R package for the statistical assessment of cell state hierarchies from single-cell RNA-seq data |
BioArchLinuxBot
|
2023-10-25 23:50 (UTC) |
|
r-similarpeak
|
1.34.0-2 |
0 |
0.00
|
Metrics to estimate a level of similarity between two ChIP-Seq profiles |
BioArchLinuxBot
|
2024-04-10 12:04 (UTC) |
|
r-simd
|
1.20.0-1 |
0 |
0.00
|
Statistical Inferences with MeDIP-seq Data (SIMD) to infer the methylation level for each CpG site |
BioArchLinuxBot
|
2023-10-26 07:23 (UTC) |
|
r-sgseq
|
1.36.0-1 |
0 |
0.00
|
Splice event prediction and quantification from RNA-seq data |
BioArchLinuxBot
|
2023-10-28 12:32 (UTC) |
|
r-sevenc
|
1.22.0-1 |
0 |
0.00
|
Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs |
BioArchLinuxBot
|
2023-10-27 09:12 (UTC) |
|
r-seqvartools
|
1.40.0-1 |
0 |
0.00
|
Tools for variant data |
BioArchLinuxBot
|
2023-10-26 03:32 (UTC) |
|
r-seqtools
|
1.36.0-2 |
0 |
0.00
|
Analysis of nucleotide, sequence and quality content on fastq files |
BioArchLinuxBot
|
2024-04-08 18:03 (UTC) |
|
r-seqsqc
|
1.24.1-1 |
0 |
0.00
|
A bioconductor package for sample quality check with next generation sequencing data |
BioArchLinuxBot
|
2024-04-18 18:01 (UTC) |
|
r-seqsetvis
|
1.22.1-1 |
0 |
0.00
|
Set Based Visualizations for Next-Gen Sequencing Data |
BioArchLinuxBot
|
2024-03-12 00:04 (UTC) |
|
r-seqpattern
|
1.34.0-1 |
0 |
0.00
|
Visualising oligonucleotide patterns and motif occurrences across a set of sorted sequences |
BioArchLinuxBot
|
2023-10-26 02:54 (UTC) |
|
r-seqminer
|
9.4-1 |
0 |
0.00
|
Efficiently Read Sequence Data (VCF Format, BCF Format, METAL Format and BGEN Format) into R |
BioArchLinuxBot
|
2024-02-03 18:02 (UTC) |
|
r-seqmagick
|
0.1.7-1 |
0 |
0.00
|
Sequence Manipulation Utilities |
BioArchLinuxBot
|
2024-01-09 12:08 (UTC) |
|
r-seqlogo
|
1.68.0-2 |
0 |
0.00
|
Sequence logos for DNA sequence alignments |
BioArchLinuxBot
|
2024-03-07 12:11 (UTC) |
|
r-seqinr
|
4.2.36-1 |
0 |
0.00
|
Biological Sequences Retrieval and Analysis |
BioArchLinuxBot
|
2023-12-08 18:03 (UTC) |