791 packages found. Page 6 of 16.

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Name Version Votes Popularity? Description Maintainer Last Updated
r-saver 1.1.2-4 0 0.00 Single-Cell RNA-Seq Gene Expression Recovery BioArchLinuxBot 2022-06-06 14:00 (UTC)
r-saturn 1.12.0-1 0 0.00 Scalable Analysis of Differential Transcript Usage for Bulk and Single-Cell RNA-sequencing Applications BioArchLinuxBot 2024-05-02 19:39 (UTC)
r-sarks 1.16.0-1 0 0.00 Suffix Array Kernel Smoothing for discovery of correlative sequence motifs and multi-motif domains BioArchLinuxBot 2024-05-02 00:25 (UTC)
r-sangerseqr 1.40.0-1 0 0.00 Tools for Sanger Sequencing Data in R BioArchLinuxBot 2024-05-03 18:09 (UTC)
r-sangeranalyser 1.14.0-1 0 0.00 sangeranalyseR: a suite of functions for the analysis of Sanger sequence data in R BioArchLinuxBot 2024-05-03 18:50 (UTC)
r-ruvseq 1.38.0-1 0 0.00 Remove Unwanted Variation from RNA-Seq Data BioArchLinuxBot 2024-05-03 04:15 (UTC)
r-rsweep 1.16.0-1 0 0.00 Functions to creation of low dimensional comparative matrices of Amino Acid Sequence occurrences BioArchLinuxBot 2024-05-02 04:36 (UTC)
r-rsubread 2.18.0-1 0 0.00 Mapping, quantification and variant analysis of sequencing data BioArchLinuxBot 2024-05-02 03:20 (UTC)
r-rseqan 1.24.0-1 0 0.00 R SeqAn BioArchLinuxBot 2024-05-01 18:24 (UTC)
r-rqc 1.38.0-1 0 0.00 Quality Control Tool for High-Throughput Sequencing Data BioArchLinuxBot 2024-05-03 05:47 (UTC)
r-rprimer 1.8.0-1 0 0.00 Design Degenerate Oligos from a Multiple DNA Sequence Alignment pekkarr 2024-05-02 18:38 (UTC)
r-roseq 1.16.0-1 0 0.00 Modeling expression ranks for noise-tolerant differential expression analysis of scRNA-Seq data BioArchLinuxBot 2024-05-01 18:58 (UTC)
r-roar 1.40.0-1 0 0.00 Identify differential APA usage from RNA-seq alignments BioArchLinuxBot 2024-05-03 00:55 (UTC)
r-rnaseqsamplesizedata 1.36.0-1 0 0.00 RnaSeqSampleSizeData BioArchLinuxBot 2024-05-03 07:01 (UTC)
r-rnaseqsamplesize 2.12.0-1 0 0.00 RnaSeqSampleSize BioArchLinuxBot 2023-10-27 15:44 (UTC)
r-rnaseqr 1.16.0-4 0 0.00 RNASeqR: an R package for automated two-group RNA-Seq analysis workflow BioArchLinuxBot 2023-04-29 08:38 (UTC)
r-rnaseqpower 1.44.0-1 0 0.00 Sample size for RNAseq studies BioArchLinuxBot 2024-05-02 04:20 (UTC)
r-rnaseqcovarimpute 1.0.2-3 0 0.00 Impute Covariate Data in RNA Sequencing Studies pekkarr 2024-04-25 19:32 (UTC)
r-rnaseqcomp 1.34.0-1 0 0.00 Benchmarks for RNA-seq Quantification Pipelines BioArchLinuxBot 2024-05-02 04:26 (UTC)
r-rnasense 1.18.0-1 0 0.00 Analysis of Time-Resolved RNA-Seq Data BioArchLinuxBot 2024-05-02 19:49 (UTC)
r-rnamodr.ribomethseq 1.18.0-1 0 0.00 Detection of 2'-O methylations by RiboMethSeq BioArchLinuxBot 2024-05-03 06:34 (UTC)
r-rnamodr.alkanilineseq 1.18.0-1 0 0.00 Detection of m7G, m3C and D modification by AlkAnilineSeq BioArchLinuxBot 2024-05-03 06:31 (UTC)
r-rnamodr 1.18.0-1 0 0.00 Detection of post-transcriptional modifications in high throughput sequencing data BioArchLinuxBot 2024-05-04 18:36 (UTC)
r-rmmquant 1.22.0-1 0 0.00 RNA-Seq multi-mapping Reads Quantification Tool BioArchLinuxBot 2024-05-03 02:46 (UTC)
r-rlseq 1.6.0-1 0 0.00 RLSeq: An analysis package for R-loop mapping data BioArchLinuxBot 2023-04-27 22:08 (UTC)
r-rjmcmcnucleosomes 1.28.0-1 0 0.00 Bayesian hierarchical model for genome-wide nucleosome positioning with high-throughput short-read data (MNase-Seq) BioArchLinuxBot 2024-05-03 03:40 (UTC)
r-rifi 1.8.0-1 0 0.00 'rifi' analyses data from rifampicin time series created by microarray or RNAseq pekkarr 2024-05-03 01:18 (UTC)
r-riboseqr 1.38.0-1 0 0.00 Analysis of sequencing data from ribosome profiling experiments BioArchLinuxBot 2024-05-02 00:46 (UTC)
r-ribodipa 1.10.0-1 0 0.00 Differential pattern analysis for Ribo-seq data BioArchLinuxBot 2023-10-27 10:42 (UTC)
r-rhtslib 2.4.1-1 0 0.00 HTSlib high-throughput sequencing library as an R package greyltc 2024-04-08 14:35 (UTC)
r-rfastp 1.14.0-1 0 0.00 An Ultra-Fast and All-in-One Fastq Preprocessor (Quality Control, Adapter, low quality and polyX trimming) and UMI Sequence Parsing). BioArchLinuxBot 2024-05-01 20:18 (UTC)
r-regionreport 1.38.0-1 0 0.00 Generate HTML or PDF reports for a set of genomic regions or DESeq2/edgeR results BioArchLinuxBot 2024-05-03 09:23 (UTC)
r-redseq 1.50.0-1 0 0.00 Analysis of high-throughput sequencing data processed by restriction enzyme digestion BioArchLinuxBot 2024-05-03 12:31 (UTC)
r-rcsl 1.12.0-1 0 0.00 Rank Constrained Similarity Learning for single cell RNA sequencing data BioArchLinuxBot 2024-05-02 22:03 (UTC)
r-rcade 1.39.1-4 0 0.00 R-based analysis of ChIP-seq And Differential Expression - a tool for integrating a count-based ChIP-seq analysis with differential expression summary data BioArchLinuxBot 2023-04-29 06:08 (UTC)
r-rbm 1.36.0-1 0 0.00 RBM: a R package for microarray and RNA-Seq data analysis BioArchLinuxBot 2024-05-01 22:51 (UTC)
r-rbec 1.12.0-1 0 0.00 Rbec: a tool for analysis of amplicon sequencing data from synthetic microbial communities BioArchLinuxBot 2024-05-03 03:43 (UTC)
r-rarevariantvis 2.32.0-1 0 0.00 A suite for analysis of rare genomic variants in whole genome sequencing data BioArchLinuxBot 2024-05-03 05:10 (UTC)
r-raids 1.2.0-1 0 0.00 Accurate Inference of Genetic Ancestry from Cancer Sequences pekkarr 2024-05-03 05:12 (UTC)
r-r453plus1toolbox 1.54.0-1 0 0.00 A package for importing and analyzing data from Roche's Genome Sequencer System BioArchLinuxBot 2024-05-03 05:01 (UTC)
r-r3cseq 1.50.0-1 0 0.00 Analysis of Chromosome Conformation Capture and Next-generation Sequencing (3C-seq) BioArchLinuxBot 2024-05-03 01:05 (UTC)
r-quantiseqr 1.12.0-1 0 0.00 Quantification of the Tumor Immune contexture from RNA-seq data BioArchLinuxBot 2024-05-02 20:01 (UTC)
r-qsea 1.30.0-1 0 0.00 IP-seq data analysis and vizualization BioArchLinuxBot 2024-05-03 03:17 (UTC)
r-qdnaseq 1.40.0-1 0 0.00 Quantitative DNA Sequencing for Chromosomal Aberrations BioArchLinuxBot 2024-05-02 01:59 (UTC)
r-pwalign 1.0.0-1 0 0.00 Perform pairwise sequence alignments pekkarr 2024-05-02 11:44 (UTC)
r-purecn 2.10.0-1 0 0.00 Copy number calling and SNV classification using targeted short read sequencing BioArchLinuxBot 2024-05-03 04:45 (UTC)
r-protr 1.7.1-1 0 0.00 Generating Various Numerical Representation Schemes for Protein Sequences BioArchLinuxBot 2024-04-20 06:01 (UTC)
r-proteodisco 1.10.0-1 0 0.00 Generation of customized protein variant databases from genomic variants, splice-junctions and manual sequences BioArchLinuxBot 2024-05-03 05:02 (UTC)
r-proper 1.36.0-1 0 0.00 PROspective Power Evaluation for RNAseq BioArchLinuxBot 2024-05-01 18:58 (UTC)
r-proactiv 1.12.0-1 0 0.00 Estimate Promoter Activity from RNA-Seq data BioArchLinuxBot 2023-11-03 00:27 (UTC)

791 packages found. Page 6 of 16.

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