Search Criteria
Package Details: gatk-bin 4.0.6.0-1
| Git Clone URL: | https://aur.archlinux.org/gatk-bin.git (read-only, click to copy) |
|---|---|
| Package Base: | gatk-bin |
| Description: | Variant discovery in high-throughput bioinformatics sequencing data |
| Upstream URL: | https://software.broadinstitute.org/gatk-bin |
| Licenses: | |
| Conflicts: | |
| Submitter: | Pastafarianist |
| Maintainer: | None |
| Last Packager: | Pastafarianist |
| Votes: | 1 |
| Popularity: | 0.000122 |
| First Submitted: | 2018-07-18 12:19 |
| Last Updated: | 2018-07-18 12:19 |
Dependencies (3)
- python (python-dbg)
- java-environment=8 (jdk5, jdk7-openjdk-infinality, java-8-openjdk-shenandoah, jdk8-openjdk-infinality, java-gcj-compat, jdk9, zulu-10-bin, jdk-devel, jdk6, jdk12-openj9-bin, zulu-12-bin, jdk12, jdk8-openjdk-dcevm, jdk11-graalvm-ee-bin, jdk13-openj9-bin, jdk9-openj9-bin, jdk10, jdk11-openjdk-dcevm, jdk8-openjdk-jetbrains, jdk8-openjdk-shenandoah, jdk10-openj9-bin, jdk14-openj9-bin, jdk7, jdk8-jetbrains, zulu-14-bin, zulu-13-bin, jdk-bcl, amazon-corretto-15, jdk11-openj9-bin, jdk11-openjdk-dcevm-conflicts-fixed, zulu-embedded-jdk8, sapmachine-jdk-bin, jdk15-adoptopenjdk, jdk-openj9, jdk16-graalvm-bin, jdk-arm, jdk8-graalvm-bin, liberica-jdk-8-full-bin, liberica-jdk-11-bin, liberica-jdk-11-full-bin, liberica-jdk-11-lite-bin, liberica-jdk-full-bin, liberica-jre-11-bin, liberica-jre-11-full-bin, jdk-openj9-bin, amazon-corretto-8, amazon-corretto-11, jdk11-msopenjdk-bin, liberica-jre-8-full-bin, zulu-embedded-jdk11, jdk8-adoptopenjdk, jdk-adoptopenjdk, jdk11-adoptopenjdk, zulu-16-bin, jdk8, jdk11, jdk7-j9-bin, jdk7r1-j9-bin, jdk8-arm, zulu-embedded-jdk, jdk8-openj9-bin, jdk8-j9-bin, jdk11-j9-bin, jdk11-jetbrains-imfix, jdk11-graalvm-bin, jdk-jetbrains, java-openjdk-bin, zulu-11-bin, zulu-8-bin, zulu-15-bin, java-openjdk-loom-ea-bin, jdk, amazon-corretto-16, jre-jetbrains, java-openjdk-ea-bin, jdk-openjdk, jdk11-openjdk, jdk7-openjdk, jdk8-openjdk)
- r (microsoft-r-open, r-mkl) (optional) – plot generation for some tools