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Package Details: gatk-bin 4.0.6.0-1
| Git Clone URL: | https://aur.archlinux.org/gatk-bin.git (read-only, click to copy) |
|---|---|
| Package Base: | gatk-bin |
| Description: | Variant discovery in high-throughput bioinformatics sequencing data |
| Upstream URL: | https://software.broadinstitute.org/gatk-bin |
| Licenses: | |
| Conflicts: | |
| Submitter: | Pastafarianist |
| Maintainer: | Pastafarianist |
| Last Packager: | Pastafarianist |
| Votes: | 1 |
| Popularity: | 0.74 |
| First Submitted: | 2018-07-18 12:19 |
| Last Updated: | 2018-07-18 12:19 |
Dependencies (3)
- python (python-dbg)
- java-environment=8 (jdk5, tuxjdk, jdk7-openjdk-infinality, java-8-openjdk-shenandoah, jdk8-openjdk-infinality, java-gcj-compat, jdk10-openjdk-openj9-bin, jdk9, zulu-10-bin, jdk-devel, jdk8-arm64, jdk8-openjdk-shenandoah, jdk8-openjdk-jetbrains, jdk6, jdk12-openj9-bin, zulu-12-bin, jdk7, jdk12, jdk8-openjdk-dcevm, jdk11-openjdk-dcevm, jetbrains-jre8, sapmachine-jdk-bin, java-openjdk-bin, jdk11-graalvm-ee-bin, liberica-jdk-full-bin, liberica-jdk-11-bin, liberica-jdk-11-lite-bin, liberica-jre-11-bin, liberica-jdk-11-full-bin, liberica-jre-11-full-bin, zulu-11-bin, zulu-8-bin, zulu-13-bin, jdk-arm, jdk11-adoptopenjdk, amazon-corretto-8, amazon-corretto-11, jdk8-adoptopenjdk, jdk, jdk-adoptopenjdk, jetbrains-jre, zulu-embedded-jdk11, jdk8-jetbrains, zulu-embedded-jdk8, jdk8, jdk-openj9-bin, jdk14-openj9-bin, jdk8-openj9-bin, jdk8-arm, jdk11-openj9-bin, jdk11, java-openjdk-ea-bin, jdk11-graalvm-bin, jdk8-graalvm-bin, jdk7-j9-bin, jdk7r1-j9-bin, jdk8-j9-bin, jdk13-openj9-bin, jdk9-openj9-bin, jdk10, jdk-jetbrains, java-openjdk-loom-ea-bin, liberica-jdk-8-full-bin, jdk-openjdk, jdk11-openjdk, jdk7-openjdk, jdk8-openjdk)
- r (microsoft-r-open, r-mkl) (optional) – plot generation for some tools