Package Details: phyml 1:3.3.20220408-1

Git Clone URL: https://aur.archlinux.org/phyml.git (read-only, click to copy)
Package Base: phyml
Description: Builds phylogenies from DNA or protein sequences using a maximum likelihood approach
Upstream URL: https://github.com/stephaneguindon/phyml
Licenses: GPL2
Submitter: None
Maintainer: mschu
Last Packager: mschu
Votes: 6
Popularity: 0.000000
First Submitted: 2009-04-02 01:54 (UTC)
Last Updated: 2022-04-11 08:17 (UTC)

Dependencies (0)

Required by (4)

Sources (1)

Latest Comments

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mschu commented on 2014-06-17 08:48 (UTC)

Yes it does, and that makes sense given that the stable version is almost 2 years old now.

Rhinoceros commented on 2014-06-17 04:05 (UTC)

This now pulls the unstable developmental version, not the stable?

Rhinoceros commented on 2014-06-06 04:12 (UTC)

Thanks for that. This is strange; it seems like they've reverted the latest stable version back to 20120412. The current PKGBUILD 404s. I modified the PKGBUILD with the new source [1] and it builds and installs fine. However, `phyml -h` suggests that I've installed "PhyML 20140606" (although perhaps that's just the build date?). [1] http://pastebin.com/GMT8VxAY

mschu commented on 2014-06-05 08:48 (UTC)

Updated to 20140604, but I can not reproduce your error. Please make sure you have an up-to-date system and tell me the version of autoconf/automake.

Rhinoceros commented on 2014-06-05 06:18 (UTC)

makepkg -s fails for me. http://pastebin.com/FwPei51c Also, the newest version is 20140223. https://github.com/stephaneguindon/phyml-downloads/releases

tegenf commented on 2013-07-12 10:24 (UTC)

Hello, had problems with building the pkg. It failed claiming that the dir ./compile is missing. It suggested to add the option '--add-missing' to automake. I did just that in the PKGBUILD file. That fixed my problem!

iosonofabio commented on 2013-04-09 07:54 (UTC)

That's ok, you did better. The binary works, btw.

mschu commented on 2013-04-08 09:26 (UTC)

Updated to the latest Google Code version (20130219). If you like to have a 3.1 binary version, feel free to maintain it :-)

iosonofabio commented on 2013-04-08 09:03 (UTC)

I made one PKGBUILD, which uses binaries though: http://pastebin.com/RzitS997

iosonofabio commented on 2013-04-08 08:46 (UTC)

PhyML 3.1 is available: http://www.atgc-montpellier.fr/phyml/versions.php In addition, depends and makedeps should be added.

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