Package Details: python-numpy-mkl 2.2.1-1

Git Clone URL: https://aur.archlinux.org/python-numpy-mkl.git (read-only, click to copy)
Package Base: python-numpy-mkl
Description: Scientific tools for Python, compiled with Intel MKL
Upstream URL: https://numpy.org
Keywords: numpy
Licenses: BSD-3-Clause
Conflicts: python-numpy
Provides: python-numpy
Submitter: bred
Maintainer: petronny (AutoUpdateBot, carlosal1015)
Last Packager: AutoUpdateBot
Votes: 38
Popularity: 0.000000
First Submitted: 2012-08-25 16:55 (UTC)
Last Updated: 2024-12-22 08:04 (UTC)

Required by (1915)

Sources (1)

Pinned Comments

carlosal1015 commented on 2024-12-23 00:56 (UTC) (edited on 2024-12-23 02:07 (UTC) by carlosal1015)

Important note: After installation, append this line

export LD_LIBRARY_PATH=/opt/intel/oneapi/mkl/2024.1/lib:$LD_LIBRARY_PATH

in ~/.bashrc, ~/.zshrc, etc. In order to avoid this ImportError.

petronny commented on 2022-09-28 08:28 (UTC)

Prebuilt binaries of this package can be found in arch4edu.

Latest Comments

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carlosal1015 commented on 2024-12-23 00:56 (UTC) (edited on 2024-12-23 02:07 (UTC) by carlosal1015)

Important note: After installation, append this line

export LD_LIBRARY_PATH=/opt/intel/oneapi/mkl/2024.1/lib:$LD_LIBRARY_PATH

in ~/.bashrc, ~/.zshrc, etc. In order to avoid this ImportError.

carlosal1015 commented on 2024-08-06 22:47 (UTC)

python-h5py was recompiled in order to work with python-numpy-2.0 in [extra]. https://gitlab.archlinux.org/archlinux/packaging/packages/python-h5py/-/commit/6a1c5c71246ffe54eca041304eded13b6bea772a

The same applies here, for example: if someone is using python-scipy-mkl compiled with python-numpy-mkl-1.x, it is not enough to build/install python-numpy-mkl-2.x. User have to rebuild python-scipy-mkl to make it work.

MartinDiehl commented on 2024-06-18 19:59 (UTC)

I've encountered the following error with h5py, which is build against the pre 2.0 version of default NumPy from https://archlinux.org/packages/extra/x86_64/python-numpy:

numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject

daizhirui commented on 2024-04-28 08:32 (UTC) (edited on 2024-04-28 08:32 (UTC) by daizhirui)

meson-python is 0.16.0 now, which is incompatible with pyproject.toml We can fix it by adding sed -i -e "s/,<0.16.0//g" pyproject.toml to PKGBUILD.

hel commented on 2023-12-16 23:56 (UTC)

intel-oneapi-mkl is mentioned as dependency but this package does not contain the required opt/intel/oneapi/setvars.sh, which is provided by intel-oneapi-basekit or intel-oneapi-common

daizhirui commented on 2023-10-08 11:41 (UTC) (edited on 2023-12-17 00:52 (UTC) by daizhirui)

Update:

to fix this issue, make sure /opt/intel/oneapi/mkl/latest/lib/intel64 is in LD_LIBRARY_PATH.

I have the issue of loading MKL in a fresh new build. 

Python 3.11.5 (main, Sep  2 2023, 14:16:33) [GCC 13.2.1 20230801] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import numpy
Traceback (most recent call last):
  File "/usr/lib/python3.11/site-packages/numpy/core/__init__.py", line 24, in <module>
    from . import multiarray
  File "/usr/lib/python3.11/site-packages/numpy/core/multiarray.py", line 10, in <module>
    from . import overrides
  File "/usr/lib/python3.11/site-packages/numpy/core/overrides.py", line 8, in <module>
    from numpy.core._multiarray_umath import (
ImportError: libmkl_intel_lp64.so.2: cannot open shared object file: No such file or directory

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/usr/lib/python3.11/site-packages/numpy/__init__.py", line 130, in <module>
    from numpy.__config__ import show as show_config
  File "/usr/lib/python3.11/site-packages/numpy/__config__.py", line 4, in <module>
    from numpy.core._multiarray_umath import (
  File "/usr/lib/python3.11/site-packages/numpy/core/__init__.py", line 50, in <module>
    raise ImportError(msg)
ImportError: 

IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!

Importing the numpy C-extensions failed. This error can happen for
many reasons, often due to issues with your setup or how NumPy was
installed.

We have compiled some common reasons and troubleshooting tips at:

    https://numpy.org/devdocs/user/troubleshooting-importerror.html

Please note and check the following:

  * The Python version is: Python3.11 from "/usr/bin/python"
  * The NumPy version is: "1.26.0"

and make sure that they are the versions you expect.
Please carefully study the documentation linked above for further help.

Original error was: libmkl_intel_lp64.so.2: cannot open shared object file: No such file or directory


The above exception was the direct cause of the following exception:

Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File "/usr/lib/python3.11/site-packages/numpy/__init__.py", line 135, in <module>
    raise ImportError(msg) from e
ImportError: Error importing numpy: you should not try to import numpy from
        its source directory; please exit the numpy source tree, and relaunch
        your python interpreter from there.

MartinDiehl commented on 2023-09-26 22:34 (UTC)

would it be possible to update the build instructions to those in the regular numpy package? There is a recent update that solves an issue with python-statsmodels and it does not rely on setup.py

petronny commented on 2023-08-21 11:34 (UTC)

I'm not sure if this is the cause to the difference but extra-x86_64-build will call makechrootpkg using configurations under /usr/share/devtools.

kbipinkumar commented on 2023-08-21 10:40 (UTC)

@petronny thanks for the response. is there any difference between building with makechrootpkg -c -r $CHROOT and extra-x86_64-build? becase thats the only thing that i am doing differently.

petronny commented on 2023-08-21 06:31 (UTC)

MKL detection works fine in a fresh new build with extra-x86_64-build and https://github.com/arch4edu/cactus/actions/runs/5721640576/job/15503541160 . 

INFO: blas_mkl_info:
INFO:   FOUND:
INFO:     libraries = ['mkl_rt', 'pthread']
INFO:     library_dirs = ['/opt/intel/oneapi/mkl/2023.1.0/lib/intel64']
INFO:     define_macros = [('SCIPY_MKL_H', None), ('HAVE_CBLAS', None)]
INFO:     include_dirs = ['/opt/intel/oneapi/mkl/2023.1.0', '/opt/intel/oneapi/mkl/2023.1.0/include', '/opt/intel/oneapi/mkl/2023.1.0/lib']
INFO: 
INFO:   FOUND:
INFO:     libraries = ['mkl_rt', 'pthread']
INFO:     library_dirs = ['/opt/intel/oneapi/mkl/2023.1.0/lib/intel64']
INFO:     define_macros = [('SCIPY_MKL_H', None), ('HAVE_CBLAS', None)]
INFO:     include_dirs = ['/opt/intel/oneapi/mkl/2023.1.0', '/opt/intel/oneapi/mkl/2023.1.0/include', '/opt/intel/oneapi/mkl/2023.1.0/lib']
INFO: 
non-existing path in 'numpy/distutils': 'site.cfg'
INFO: lapack_opt_info:
INFO: lapack_armpl_info:
INFO:   libraries armpl_lp64_mp not found in ['/usr/local/lib', '/usr/lib64', '/usr/lib', '/usr/lib/']
INFO:   NOT AVAILABLE
INFO: 
INFO: lapack_mkl_info:
INFO:   FOUND:
INFO:     libraries = ['mkl_rt', 'pthread']
INFO:     library_dirs = ['/opt/intel/oneapi/mkl/2023.1.0/lib/intel64']
INFO:     define_macros = [('SCIPY_MKL_H', None), ('HAVE_CBLAS', None)]
INFO:     include_dirs = ['/opt/intel/oneapi/mkl/2023.1.0', '/opt/intel/oneapi/mkl/2023.1.0/include', '/opt/intel/oneapi/mkl/2023.1.0/lib']
INFO: 
INFO:   FOUND:
INFO:     libraries = ['mkl_rt', 'pthread']
INFO:     library_dirs = ['/opt/intel/oneapi/mkl/2023.1.0/lib/intel64']
INFO:     define_macros = [('SCIPY_MKL_H', None), ('HAVE_CBLAS', None)]
INFO:     include_dirs = ['/opt/intel/oneapi/mkl/2023.1.0', '/opt/intel/oneapi/mkl/2023.1.0/include', '/opt/intel/oneapi/mkl/2023.1.0/lib']
INFO: 
Warning: attempted relative import with no known parent package

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