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Package Details: r-dbi 1.2.3-1
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| Git Clone URL: | https://aur.archlinux.org/r-dbi.git (read-only, click to copy) |
|---|---|
| Package Base: | r-dbi |
| Description: | R Database Interface |
| Upstream URL: | https://cran.r-project.org/package=DBI |
| Licenses: | LGPL-2.1-or-later |
| Submitter: | mfrichtl |
| Maintainer: | pekkarr (BioArchLinuxBot) |
| Last Packager: | BioArchLinuxBot |
| Votes: | 1 |
| Popularity: | 0.080180 |
| First Submitted: | 2019-11-27 21:38 (UTC) |
| Last Updated: | 2024-06-03 00:01 (UTC) |
Dependencies (21)
- r (r352AUR, r-mklAUR)
- r-testthatAUR (check)
- r-arrowAUR (optional)
- r-blobAUR (optional)
- r-covrAUR (optional)
- r-dbitestAUR (optional)
- r-dbplyrAUR (optional)
- r-downlitAUR (optional)
- r-dplyrAUR (optional)
- r-glueAUR (optional)
- r-hmsAUR (optional)
- r-knitrAUR (optional)
- r-magrittrAUR (optional)
- r-nanoarrowAUR (optional)
- r-rmariadbAUR (optional)
- r-rmarkdownAUR (optional)
- r-rprojrootAUR (optional)
- r-rsqliteAUR (optional)
- r-testthatAUR (optional)
- r-vctrsAUR (optional)
- r-xml2AUR (optional)
Required by (142)
- r-affycoretools
- r-annaffy
- r-annmap
- r-annotate
- r-annotationdbi
- r-annotationforge
- r-annotationhubdata
- r-anvilbilling
- r-aroma.affymetrix (optional)
- r-arrow (optional)
- r-autonomics (optional)
- r-batchjobs
- r-biglm
- r-bigrquery
- r-bioassayr
- r-biocfilecache
- r-bioconcotk
- r-biotmle (optional)
- r-category
- r-celldex
- r-chemminer
- r-chippeakanno
- r-cn.farms
- r-cner
- r-combi
- r-compounddb
- r-crossmeta
- r-customprodb
- r-dbitest
- r-dbplyr
- r-decipher
- r-dialignr
- r-dmwr2
- r-dplyr (optional)
- r-duckdb
- r-eir
- r-ensembldb
- r-epitxdb
- r-epivizrdata (optional)
- r-experimenthubdata
- r-frma
- r-frmatools
- r-genomicfeatures
- r-genvisr
- r-gladiatox
- r-glue (optional)
- r-go.db (optional)
- r-gosemsim
- r-gwastools
- r-gypsum (check)
- r-gypsum (optional)
- r-hgu133a.db (optional)
- r-hgu133a2.db (optional)
- r-hgu133plus2.db (optional)
- r-hgu95a.db (optional)
- r-hgu95av2.db (optional)
- r-hpo.db
- r-interest
- r-ipddb
- r-isobar (optional)
- r-isoformswitchanalyzer
- r-italics
- r-kegg.db (optional)
- r-keggorthology
- r-knitr (optional)
- r-learnr (optional)
- r-lrbasedbi
- r-lumi
- r-mgsa (optional)
- r-mimager
- r-mirbaseversions.db
- r-mirnameconverter
- r-mirnatap
- r-mirnatap.db
- r-mitools
- r-mpo.db
- r-msbackendmassbank
- r-msbackendsql
- r-msexperiment
- r-mspurity
- r-nanoparquet (optional)
- r-netsam
- r-norce
- r-odbc
- r-oligo
- r-oligoclasses
- r-org.bt.eg.db (optional)
- r-org.ce.eg.db (optional)
- r-org.dm.eg.db (optional)
- r-org.dr.eg.db (optional)
- r-org.hs.eg.db (optional)
- r-org.mm.eg.db (optional)
- r-org.rn.eg.db (optional)
- r-org.sc.sgd.db (optional)
- r-organism.dplyr
- r-organismdbi
- r-pd.mapping50k.xba240
- r-pdinfobuilder
- r-pfam.db (optional)
- r-pigengene
- r-pillar (optional)
- r-plethy
- r-quantmod (optional)
- r-r6p (optional)
- r-radiant.data (optional)
- r-rcm
- r-recordlinkage
- r-regutools
- r-restfulse
- r-rgdal (optional)
- r-rimmport
- r-rmariadb
- r-rmir
- r-rmysql
- r-rpostgres
- r-rpostgresql
- r-rsqlite
- r-rtrm
- r-scrime (optional)
- r-scrnaseq
- r-scrnaseqapp
- r-sf
- r-shinylogs (check)
- r-shinylogs (optional)
- r-shinymanager
- r-specl
- r-splicewiz (optional)
- r-sqldataframe
- r-sqldf
- r-storr (optional)
- r-storr (check)
- r-survey (optional)
- r-tfbstools
- r-tigre
- r-topgo
- r-trena
- r-txdbmaker
- r-ucsc.utils (check)
- r-ucsc.utils (optional)
- r-valr (optional)
- r-variantannotation
- r-withr (optional)
Latest Comments
hcartiaux commented on 2022-03-25 08:37 (UTC)
Ok ! Thank you very much for your work ! :)
pekkarr commented on 2022-03-24 16:41 (UTC)
That's a good point. I will soon remove the semi-cyclical dependencies.
hcartiaux commented on 2022-03-23 09:36 (UTC)
@pekkarr, if it does not work out of the box, it will discourage everybody to use the r- packages. Given the number of votes on these packages, I doubt of the usefulness of doing so much packaging work for maybe 2 or 3 persons...
Personally, I will not use a random binary repository as suggested by @dviktor but it may be enough to just sync his PKGBUILD from his github repository to AUR?
pekkarr commented on 2022-03-16 15:56 (UTC)
The dependency cycle is not a bug, as
r-rsqliteis required to run the test suite forr-dbi. I don't think Arch package guidelines say anything about semi-cyclical dependencies.The correct way to build
r-rsqlitewith checks is to buildr-dbifirst with--nocheck, buildr-rsqliteand then rebuildr-dbiwith checks.You can also disable
check()functions globally inmakepkg.confif you want more convenient builds.jose1711 commented on 2022-03-15 21:44 (UTC) (edited on 2022-03-15 21:44 (UTC) by jose1711)
r-rsqlitedepends onr-dbir-dbidepends onr-rsqlite(check)to be able to install both one has to do: *
makepkg --nocheck -iforr-dbi*makepkg -iforr-rsqlitecould you please fix this semi-cyclical dependency?
dviktor commented on 2021-12-22 20:31 (UTC)
Further maintenance and support for this package has been moved there. You can install pre-built packages from my repo