Arch Linux User Repository

Looks like upstream issue.

Im getting the same error in the last comment too.

/home/alhazacod/.cache/yay/superlu_dist/src/superlu_dist-9.1.0/SRC/double/dutil_dist.c: In function ‘dDumpLblocks’:
/home/alhazacod/.cache/yay/superlu_dist/src/superlu_dist-9.1.0/SRC/double/dutil_dist.c:824:20: error: conflicting types for ‘fopen’; have ‘FILE *(void)’
  824 |         FILE *fp, *fopen();
      |                    ^~~~~
In file included from /home/alhazacod/.cache/yay/superlu_dist/src/superlu_dist-9.1.0/SRC/include/superlu_defs.h:59,
                 from /home/alhazacod/.cache/yay/superlu_dist/src/superlu_dist-9.1.0/SRC/include/superlu_ddefs.h:37,
                 from /home/alhazacod/.cache/yay/superlu_dist/src/superlu_dist-9.1.0/SRC/double/dutil_dist.c:24:
/usr/include/stdio.h:264:14: note: previous declaration of ‘fopen’ with type ‘FILE *(const char * restrict,  const char * restrict)’
  264 | extern FILE *fopen (const char *__restrict __filename,
      |              ^~~~~
/home/alhazacod/.cache/yay/superlu_dist/src/superlu_dist-9.1.0/SRC/double/dutil_dist.c:867:21: error: too many arguments to function ‘fopen’; expected 0, have 2
  867 |         if ( !(fp = fopen(filename, "w")) ) {
      |                     ^~~~~ ~~~~~~~~
/home/alhazacod/.cache/yay/superlu_dist/src/superlu_dist-9.1.0/SRC/double/dutil_dist.c:824:20: note: declared here
  824 |         FILE *fp, *fopen();
      |                    ^~~~~
/home/alhazacod/.cache/yay/superlu_dist/src/superlu_dist-9.1.0/SRC/double/dutil_dist.c: In function ‘dDumpLblocks3D’:
/home/alhazacod/.cache/yay/superlu_dist/src/superlu_dist-9.1.0/SRC/double/dutil_dist.c:1755:21: error: too many arguments to function ‘fopen’; expected 0, have 2
 1755 |         if ( !(fp = fopen(filename, "w")) ) {
      |                     ^~~~~ ~~~~~~~~
/home/alhazacod/.cache/yay/superlu_dist/src/superlu_dist-9.1.0/SRC/double/dutil_dist.c:1709:20: note: declared here
 1709 |         FILE *fp, *fopen();
      |                    ^~~~~
/home/alhazacod/.cache/yay/superlu_dist/src/superlu_dist-9.1.0/SRC/double/dutil_dist.c: In function ‘dcheckLUFromDisk’:
/home/alhazacod/.cache/yay/superlu_dist/src/superlu_dist-9.1.0/SRC/double/dutil_dist.c:1671:33: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
 1671 |                                 fread(Lval_buf, sizeof(double), len2, fp); // assume fp will be incremented
      |                                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/alhazacod/.cache/yay/superlu_dist/src/superlu_dist-9.1.0/SRC/double/dutil_dist.c:1681:33: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
 1681 |                                 fread(Uval_buf, sizeof(double), lenv, fp); // assume fp will be incremented
      |                                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: *** [SRC/CMakeFiles/superlu_dist.dir/build.make:597: SRC/CMakeFiles/superlu_dist.dir/double/dutil_dist.c.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:183: SRC/CMakeFiles/superlu_dist.dir/all] Error 2
make: *** [Makefile:146: all] Error 2
==> ERROR: A failure occurred in build().
    Aborting...
 -> error making: superlu_dist-exit status 4
 -> Failed to install the following packages. Manual intervention is required:
superlu_dist - exit status 4

/home/luca/Build/superlu_dist/src/superlu_dist-9.1.0/SRC/double/dutil_dist.c: In function ‘dDumpLblocks’:
/home/luca/Build/superlu_dist/src/superlu_dist-9.1.0/SRC/double/dutil_dist.c:824:20: error: conflicting types for ‘fopen’; have ‘FILE *(void)’
  824 |         FILE *fp, *fopen();
      |                    ^~~~~
In file included from /home/luca/Build/superlu_dist/src/superlu_dist-9.1.0/SRC/include/superlu_defs.h:59,
                 from /home/luca/Build/superlu_dist/src/superlu_dist-9.1.0/SRC/include/superlu_ddefs.h:37,
                 from /home/luca/Build/superlu_dist/src/superlu_dist-9.1.0/SRC/double/dutil_dist.c:24:
/usr/include/stdio.h:264:14: note: previous declaration of ‘fopen’ with type ‘FILE *(const char * restrict,  const char * restrict)’
  264 | extern FILE *fopen (const char *__restrict __filename,
      |              ^~~~~
/home/luca/Build/superlu_dist/src/superlu_dist-9.1.0/SRC/double/dutil_dist.c:867:21: error: too many arguments to function ‘fopen’; expected 0, have 2
  867 |         if ( !(fp = fopen(filename, "w")) ) {
      |                     ^~~~~ ~~~~~~~~
/home/luca/Build/superlu_dist/src/superlu_dist-9.1.0/SRC/double/dutil_dist.c:824:20: note: declared here
  824 |         FILE *fp, *fopen();
      |                    ^~~~~
/home/luca/Build/superlu_dist/src/superlu_dist-9.1.0/SRC/double/dutil_dist.c: In function ‘dDumpLblocks3D’:
/home/luca/Build/superlu_dist/src/superlu_dist-9.1.0/SRC/double/dutil_dist.c:1755:21: error: too many arguments to function ‘fopen’; expected 0, have 2
 1755 |         if ( !(fp = fopen(filename, "w")) ) {
      |                     ^~~~~ ~~~~~~~~
/home/luca/Build/superlu_dist/src/superlu_dist-9.1.0/SRC/double/dutil_dist.c:1709:20: note: declared here
 1709 |         FILE *fp, *fopen();
      |                    ^~~~~
/home/luca/Build/superlu_dist/src/superlu_dist-9.1.0/SRC/double/dutil_dist.c: In function ‘dcheckLUFromDisk’:
/home/luca/Build/superlu_dist/src/superlu_dist-9.1.0/SRC/double/dutil_dist.c:1671:33: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
 1671 |                                 fread(Lval_buf, sizeof(double), len2, fp); // assume fp will be incremented
      |                                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/luca/Build/superlu_dist/src/superlu_dist-9.1.0/SRC/double/dutil_dist.c:1681:33: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
 1681 |                                 fread(Uval_buf, sizeof(double), lenv, fp); // assume fp will be incremented
      |                                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: *** [SRC/CMakeFiles/superlu_dist.dir/build.make:597: SRC/CMakeFiles/superlu_dist.dir/double/dutil_dist.c.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:183: SRC/CMakeFiles/superlu_dist.dir/all] Error 2
make: *** [Makefile:146: all] Error 2
==> ERROR: A failure occurred in build().
    Aborting...

Hi ChrisTX I also updated this package:

# Maintainer: Christian Pfeiffer <cpfeiffer at live dot de>
# Contributor: Gianluca Pettinello <g_pet at hotmail dot com>
pkgname=superlu_dist
pkgver=7.1.1
pkgrel=1
pkgdesc="Set of subroutines to solve a sparse linear system (MPI parallel version)"
arch=('x86_64')
url="https://github.com/xiaoyeli/superlu_dist"
license=('custom')
depends=('lapack' 'parmetis' 'openblas')
makedepends=('cmake' 'gcc-fortran')
source=(${url}/archive/v$pkgver.tar.gz)

sha512sums=('558053b3d4a56eb661c4f04d4fcab6604018ce5db97115394c161b56c9c278ff')
options=('staticlibs')

prepare() {
  mkdir -p build

  # CombBLAS uses C++14 in its headers. Otherwise the code won't build
  sed -i "s/set(CMAKE_CXX_STANDARD 11)/set(CMAKE_CXX_STANDARD 14)/" "$srcdir/$pkgname-$pkgver/CMakeLists.txt"
}

build() {
  cd build
  cmake ../$pkgname-$pkgver/ \
    -DTPL_PARMETIS_INCLUDE_DIRS="/usr/include" \
    -DTPL_PARMETIS_LIBRARIES="/usr/lib/libparmetis.so" \
    -DTPL_ENABLE_BLASLIB=ON \
    -DTPL_ENABLE_LAPACKLIB=ON \
    -DBUILD_SHARED_LIBS=ON \
    -DCMAKE_BUILD_TYPE=Release \
    -DCMAKE_INSTALL_LIBDIR=lib \
    -DCMAKE_INSTALL_INCLUDEDIR=include/superlu_dist \
    -DCMAKE_INSTALL_PREFIX=/usr

  make
}

package() {
  cd build

  make DESTDIR="${pkgdir}" install

  mkdir -p $pkgdir/usr/share/doc/$pkgname \
           $pkgdir/usr/share/licenses/$pkgname

  install -m644 $srcdir/$pkgname-$pkgver/README.md $pkgdir/usr/share/doc/$pkgname
  install -m644 $srcdir/$pkgname-$pkgver/License.txt $pkgdir/usr/share/licenses/$pkgname
  install -m644 $srcdir/$pkgname-$pkgver/DOC/ug.pdf $pkgdir/usr/share/doc/$pkgname/ug.pdf
}

Please update Thanks Gianluca

For the time being, this package builds successfully after creating the following symlink:

$ sudo ln -s /usr/include/CombBLAS/{Applications/,}BipartiteMatchings

Afterwards, it may be necessary to do a cleanbuild so that the cmake configuration is rebuilt.

This package won't build because combblas (upstream) moved the BipartiteMatching directory into an Applications folder.

Also worth mentioning that version 7 is out.

I can't update the package to 6.3.0 at the moment since a recent code restructuring prevents it from compiling. I've reported this upstream and was told a fix was inbound in a few days.

Update 4/3/20: 6.3.1 now resolves this issue, but the changes in 6.3 have dug up an underlying bug in combblas that breaks compilation when building shared libraries. I've reported it upstream and hopefully this can be resolved soon.

Thanks, I forgot SuperLU included a Fortran interface. This should be fixed now.

Process XSDK defaults ...
USE_XSDK_DEFAULTS = 'FALSE'
-- SuperLU_DIST will be built as a shared library.
-- SuperLU_DIST will also be built as a static library.
-- The Fortran compiler identification is unknown
CMake Error at CMakeLists.txt:90 (enable_language):
  No CMAKE_Fortran_COMPILER could be found.

  Tell CMake where to find the compiler by setting either the environment
  variable "FC" or the CMake cache entry CMAKE_Fortran_COMPILER to the full
  path to the compiler, or to the compiler name if it is in the PATH.

Please add the fortran compiler as a dependency.