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Package Details: viennarna 2.6.4-2
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Git Clone URL: | https://aur.archlinux.org/viennarna.git (read-only, click to copy) |
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Package Base: | viennarna |
Description: | RNA Secondary Structure Prediction and Comparison |
Upstream URL: | http://www.tbi.univie.ac.at/RNA |
Licenses: | custom |
Groups: | viennarna-package |
Provides: | Kinfold, kinwalker, libRNA, RNAforester, RNAxplorer, viennarna2 |
Submitter: | RaumZeit |
Maintainer: | RaumZeit |
Last Packager: | RaumZeit |
Votes: | 4 |
Popularity: | 0.000000 |
First Submitted: | 2015-09-17 22:04 (UTC) |
Last Updated: | 2023-09-26 10:58 (UTC) |
Dependencies (16)
- blas (blis-cblas-openmpAUR, blis-cblasAUR, aocl-blis-aoccAUR, aocl-blisAUR, blas-mklAUR, blas-gitAUR, blis-gitAUR, blisAUR, atlas-lapackAUR, blas-aocl-gccAUR, blas-aocl-aoccAUR, openblas-lapackAUR, blas-openblas)
- gsl (gsl-gitAUR)
- lapack (aocl-libflame-aoccAUR, aocl-libflameAUR, blas-mklAUR, lapack-gitAUR, atlas-lapackAUR, blas-aocl-gccAUR, blas-aocl-aoccAUR, openblas-lapackAUR, blas-openblas)
- mpfr (mpfr-gitAUR)
- perl (perl-gitAUR)
- blas (blis-cblas-openmpAUR, blis-cblasAUR, aocl-blis-aoccAUR, aocl-blisAUR, blas-mklAUR, blas-gitAUR, blis-gitAUR, blisAUR, atlas-lapackAUR, blas-aocl-gccAUR, blas-aocl-aoccAUR, openblas-lapackAUR, blas-openblas) (make)
- check (check-gitAUR) (make)
- gcc-fortran (gccrs-fortran-gitAUR, gcc11-fortranAUR, gcc-fortran-gitAUR) (make)
- gsl (gsl-gitAUR) (make)
- lapack (aocl-libflame-aoccAUR, aocl-libflameAUR, blas-mklAUR, lapack-gitAUR, atlas-lapackAUR, blas-aocl-gccAUR, blas-aocl-aoccAUR, openblas-lapackAUR, blas-openblas) (make)
- lapacke (aocl-libflame-aoccAUR, aocl-libflameAUR, blas-mklAUR, lapacke-gitAUR, blas-aocl-gccAUR, blas-aocl-aoccAUR, openblas-lapackAUR, blas-openblas) (make)
- libtool (libtool-gitAUR) (make)
- mpfr (mpfr-gitAUR) (make)
- perl (perl-gitAUR) (make)
- python (python32AUR, python37AUR, python310AUR) (make)
- griAUR (gri-gitAUR) (optional) – create 2D plots of secondary structure landscape with RNA2Dfold
Required by (11)
- barriers (optional)
- centroid-rna-package (make)
- dafs-git
- intarna-git
- ipknot (make)
- kinwalker
- locarna
- perl-rna
- perl-rna-barrier (optional)
- python-rna
- snoreport
Latest Comments
RaumZeit commented on 2020-08-04 09:15 (UTC)
The compilation issues have been fixed in release 2 of version 2.4.14
tzok commented on 2020-07-31 10:26 (UTC) (edited on 2020-07-31 10:29 (UTC) by tzok)
The build fails during linking of Kinfold. I am using gcc-10.1.0-2.
RaumZeit commented on 2019-05-31 15:28 (UTC)
This problem is due to swig >= 4.0.0. The upstream version has already been adapted to this situation and I've just pushed version 2.4.13 to AUR which fixes this bug.
balwierz commented on 2019-05-15 15:51 (UTC) (edited on 2019-05-15 15:51 (UTC) by balwierz)
Build fails.
RaumZeit commented on 2016-06-30 12:48 (UTC)
anntzer commented on 2016-06-26 08:19 (UTC)