r-rngtools
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1.5.2-4 |
0 |
0.00
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Utility Functions for Working with Random Number Generators |
BioArchLinuxBot
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2022-06-06 13:15 (UTC) |
r-rngwell
|
0.10.9-3 |
0 |
0.00
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Toolbox for WELL Random Number Generators |
BioArchLinuxBot
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2024-03-15 14:18 (UTC) |
r-rnifti
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1.6.1-1 |
0 |
0.00
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Fast R and C++ Access to NIfTI Images |
BioArchLinuxBot
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2024-03-07 06:02 (UTC) |
r-rnits
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1.38.0-1 |
0 |
0.00
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R Normalization and Inference of Time Series data |
BioArchLinuxBot
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2024-05-02 12:50 (UTC) |
r-rnomni
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1.0.1.2-1 |
0 |
0.00
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Rank Normal Transformation Omnibus Test |
BioArchLinuxBot
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2023-09-11 06:02 (UTC) |
r-roar
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1.40.0-1 |
0 |
0.00
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Identify differential APA usage from RNA-seq alignments |
BioArchLinuxBot
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2024-05-03 00:55 (UTC) |
r-roastgsa
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1.2.0-1 |
0 |
0.00
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Rotation based gene set analysis |
pekkarr
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2024-05-02 12:32 (UTC) |
r-robma
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3.1.0-3 |
0 |
0.00
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Robust Bayesian Meta-Analyses |
BioArchLinuxBot
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2023-10-27 04:58 (UTC) |
r-robtt
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1.3.0-1 |
0 |
0.00
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Robust Bayesian T-Test |
BioArchLinuxBot
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2024-04-05 00:11 (UTC) |
r-robumeta
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2.1-3 |
0 |
0.00
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Robust Variance Meta-Regression |
pekkarr
|
2024-04-24 21:14 (UTC) |
r-robust
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0.7.4-1 |
0 |
0.00
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Port of the S+ "Robust Library" |
BioArchLinuxBot
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2024-02-04 12:01 (UTC) |
r-robustbase
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0.99.2-1 |
0 |
0.00
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Basic Robust Statistics |
pekkarr
|
2024-03-17 13:17 (UTC) |
r-robustrankaggreg
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1.2.1-3 |
0 |
0.00
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Methods for Robust Rank Aggregation |
BioArchLinuxBot
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2024-02-29 18:03 (UTC) |
r-roc
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1.80.0-1 |
0 |
0.00
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utilities for ROC, with microarray focus |
BioArchLinuxBot
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2024-05-01 19:02 (UTC) |
r-rocit
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2.1.2-1 |
0 |
0.00
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Performance Assessment of Binary Classifier with Visualization |
BioArchLinuxBot
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2024-05-16 18:02 (UTC) |
r-rockchalk
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1.8.157-1 |
0 |
0.00
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Regression Estimation and Presentation |
BioArchLinuxBot
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2022-08-06 18:04 (UTC) |
r-rocpai
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1.16.0-1 |
0 |
0.00
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Receiver Operating Characteristic Partial Area Indexes for evaluating classifiers |
BioArchLinuxBot
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2024-05-02 22:50 (UTC) |
r-rocr
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1.0.11-4 |
0 |
0.00
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Visualizing the Performance of Scoring Classifiers |
BioArchLinuxBot
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2022-06-06 13:20 (UTC) |
r-rodbc
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1.3.23-2 |
0 |
0.00
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ODBC Database Access |
pekkarr
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2024-04-24 23:18 (UTC) |
r-rogue
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2.1.6-2 |
0 |
0.00
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Identify Rogue Taxa in Sets of Phylogenetic Trees |
malacology
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2024-02-23 00:05 (UTC) |
r-roi
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1.0.1-1 |
0 |
0.00
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R Optimization Infrastructure |
BioArchLinuxBot
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2023-04-24 06:02 (UTC) |
r-roi.plugin.lpsolve
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1.0.2-1 |
0 |
0.00
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'lp_solve' Plugin for the 'R' Optimization Infrastructure |
BioArchLinuxBot
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2023-07-07 12:01 (UTC) |
r-rolde
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1.8.0-1 |
0 |
0.00
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Robust longitudinal Differential Expression |
pekkarr
|
2024-05-02 20:23 (UTC) |
r-rolog
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0.9.14-1 |
0 |
0.00
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Query SWI-Prolog from R |
dringsim
|
2023-08-22 03:02 (UTC) |
r-rols
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3.0.0-1 |
0 |
0.00
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An R interface to the Ontology Lookup Service |
BioArchLinuxBot
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2024-05-02 12:14 (UTC) |
r-rontotools
|
2.32.0-1 |
0 |
0.00
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R Onto-Tools suite |
BioArchLinuxBot
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2024-05-02 01:15 (UTC) |
r-rook
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1.2-3 |
0 |
0.00
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HTTP Web Server for R |
BioArchLinuxBot
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2024-04-10 18:02 (UTC) |
r-roopsd
|
0.3.9-1 |
0 |
0.00
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R Object Oriented Programming for Statistical Distribution |
AlexBocken
|
2024-01-11 20:29 (UTC) |
r-rootsolve
|
1.8.2.4-2 |
1 |
0.00
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Nonlinear Root Finding, Equilibrium and Steady-State Analysis of Ordinary Differential Equations |
BioArchLinuxBot
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2024-02-29 00:01 (UTC) |
r-ropls
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1.36.0-1 |
0 |
0.00
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PCA, PLS(-DA) and OPLS(-DA) for multivariate analysis and feature selection of omics data |
BioArchLinuxBot
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2024-05-02 22:47 (UTC) |
r-roptim
|
0.1.6-4 |
0 |
0.00
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General Purpose Optimization in R using C++ |
BioArchLinuxBot
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2022-11-26 12:32 (UTC) |
r-rorcid
|
0.7.0-1 |
0 |
0.00
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Interface to the 'Orcid.org' API |
BioArchLinuxBot
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2022-11-12 13:36 (UTC) |
r-rose
|
0.0.4-4 |
0 |
0.00
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Random Over-Sampling Examples |
pekkarr
|
2024-04-24 19:26 (UTC) |
r-roseq
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1.16.0-1 |
0 |
0.00
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Modeling expression ranks for noise-tolerant differential expression analysis of scRNA-Seq data |
BioArchLinuxBot
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2024-05-01 18:58 (UTC) |
r-rots
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1.32.0-1 |
0 |
0.00
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Reproducibility-Optimized Test Statistic |
BioArchLinuxBot
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2024-05-01 18:25 (UTC) |
r-roxygen2
|
7.3.1-1 |
1 |
0.00
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In-Line Documentation for R |
BioArchLinuxBot
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2024-01-23 00:18 (UTC) |
r-rpa
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1.60.0-1 |
0 |
0.00
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RPA: Robust Probabilistic Averaging for probe-level analysis |
BioArchLinuxBot
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2024-05-02 01:42 (UTC) |
r-rpart.plot
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3.1.2-1 |
0 |
0.00
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Plot 'rpart' Models: An Enhanced Version of 'plot.rpart' |
BioArchLinuxBot
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2024-02-26 18:01 (UTC) |
r-rpdb
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2.3.4-1 |
0 |
0.00
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Read, Write, Visualize and Manipulate PDB Files |
BioArchLinuxBot
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2023-10-27 05:00 (UTC) |
r-rpf
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1.0.14-1 |
0 |
0.00
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Response Probability Functions |
BioArchLinuxBot
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2023-08-22 00:02 (UTC) |
r-rpmg
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2.2.7-2 |
0 |
0.00
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Graphical User Interface (GUI) for Interactive R Analysis Sessions |
BioArchLinuxBot
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2024-02-29 18:02 (UTC) |
r-rpmm
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1.25-10 |
0 |
0.00
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Recursively Partitioned Mixture Model |
BioArchLinuxBot
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2024-04-24 19:53 (UTC) |
r-rpostgres
|
1.4.6-1 |
0 |
0.00
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Rcpp Interface to PostgreSQL |
peippo
|
2023-10-25 08:25 (UTC) |
r-rpostgresql
|
0.7.6-1 |
0 |
0.00
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R Interface to the 'PostgreSQL' Database System |
BioArchLinuxBot
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2024-01-11 12:03 (UTC) |
r-rpref
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1.4.0-4 |
0 |
0.00
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Database Preferences and Skyline Computation |
BioArchLinuxBot
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2024-02-08 12:05 (UTC) |
r-rprimer
|
1.8.0-1 |
0 |
0.00
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Design Degenerate Oligos from a Multiple DNA Sequence Alignment |
pekkarr
|
2024-05-02 18:38 (UTC) |
r-rprojroot
|
2.0.4-1 |
3 |
0.00
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Find Files in Project Subdirectories |
greyltc
|
2023-11-05 19:06 (UTC) |
r-rprotobuf
|
0.4.22-1 |
0 |
0.00
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R Interface to the 'Protocol Buffers' 'API' (Version 2 or 3) |
pekkarr
|
2024-01-21 18:05 (UTC) |
r-rprotobuflib
|
2.16.0-1 |
0 |
0.00
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C++ headers and static libraries of Protocol buffers |
BioArchLinuxBot
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2024-05-02 03:09 (UTC) |
r-rpsixml
|
2.38.0-4 |
0 |
0.00
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R interface to PSI-MI 2.5 files |
BioArchLinuxBot
|
2022-11-04 06:11 (UTC) |
r-rpx
|
2.12.0-1 |
0 |
0.00
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R Interface to the ProteomeXchange Repository |
BioArchLinuxBot
|
2024-05-01 23:21 (UTC) |
r-rqc
|
1.38.0-1 |
0 |
0.00
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Quality Control Tool for High-Throughput Sequencing Data |
BioArchLinuxBot
|
2024-05-03 05:47 (UTC) |
r-rqt
|
1.28.0-1 |
0 |
0.00
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rqt: utilities for gene-level meta-analysis |
BioArchLinuxBot
|
2023-10-27 10:14 (UTC) |
r-rqubic
|
1.50.0-1 |
0 |
0.00
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Qualitative biclustering algorithm for expression data analysis in R |
BioArchLinuxBot
|
2024-05-01 20:38 (UTC) |
r-rrcov
|
1.7.5-1 |
0 |
0.00
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Scalable Robust Estimators with High Breakdown Point |
BioArchLinuxBot
|
2024-01-31 00:03 (UTC) |
r-rrdp
|
1.38.0-1 |
0 |
0.00
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Interface to the RDP Classifier |
BioArchLinuxBot
|
2024-05-11 12:02 (UTC) |
r-rrho
|
1.44.0-1 |
0 |
0.00
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Inference on agreement between ordered lists |
BioArchLinuxBot
|
2024-05-01 19:04 (UTC) |
r-rrvgo
|
1.16.0-1 |
0 |
0.00
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Reduce + Visualize GO |
BioArchLinuxBot
|
2024-05-02 23:23 (UTC) |
r-rsample
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1.2.1-1 |
0 |
0.00
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General Resampling Infrastructure |
BioArchLinuxBot
|
2024-03-25 12:07 (UTC) |
r-rsamtools
|
2.18.0-1 |
0 |
0.00
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Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import |
greyltc
|
2023-11-02 10:59 (UTC) |
r-rsbml
|
2.62.0-1 |
0 |
0.00
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R support for SBML, using libsbml |
BioArchLinuxBot
|
2024-05-01 18:06 (UTC) |
r-rscudo
|
1.20.0-1 |
0 |
0.00
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Signature-based Clustering for Diagnostic Purposes |
BioArchLinuxBot
|
2024-05-02 19:25 (UTC) |
r-rsdmx
|
0.6-1 |
0 |
0.00
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Tools for Reading SDMX Data and Metadata |
dhn
|
2021-05-28 15:18 (UTC) |
r-rseis
|
4.2.0-2 |
0 |
0.00
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Seismic Time Series Analysis Tools |
BioArchLinuxBot
|
2024-04-14 12:17 (UTC) |
r-rsemmed
|
1.14.0-1 |
0 |
0.00
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An interface to the Semantic MEDLINE database |
BioArchLinuxBot
|
2024-05-01 21:16 (UTC) |
r-rseqan
|
1.24.0-1 |
0 |
0.00
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R SeqAn |
BioArchLinuxBot
|
2024-05-01 18:24 (UTC) |
r-rserve
|
1.8.13-2 |
0 |
0.00
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Binary R server |
pekkarr
|
2024-01-25 18:01 (UTC) |
r-rslurm
|
0.6.2-3 |
0 |
0.00
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Submit R Calculations to a 'Slurm' Cluster |
BioArchLinuxBot
|
2024-04-09 12:11 (UTC) |
r-rsm
|
2.10.4-2 |
0 |
0.00
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Response-Surface Analysis |
BioArchLinuxBot
|
2024-04-12 12:04 (UTC) |
r-rsnns
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0.4.17-1 |
0 |
0.00
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Neural Networks using the Stuttgart Neural Network Simulator (SNNS) |
BioArchLinuxBot
|
2023-11-30 06:02 (UTC) |
r-rsnps
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0.6.0-4 |
0 |
0.00
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Get 'SNP' ('Single-Nucleotide' 'Polymorphism') Data on the Web |
BioArchLinuxBot
|
2023-10-27 03:36 (UTC) |
r-rsolnp
|
1.16-7 |
1 |
0.07
|
General Non-Linear Optimization |
BioArchLinuxBot
|
2024-04-07 12:05 (UTC) |
r-rsparse
|
0.5.1-1 |
0 |
0.00
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Statistical Learning on Sparse Matrices |
BioArchLinuxBot
|
2022-09-12 00:01 (UTC) |
r-rspc
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1.2.2-8 |
0 |
0.00
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Nelson Rules for Control Charts |
BioArchLinuxBot
|
2024-03-08 00:16 (UTC) |
r-rspectra
|
0.16.1-1 |
0 |
0.00
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Solvers for Large-Scale Eigenvalue and SVD Problems |
BioArchLinuxBot
|
2022-06-06 13:37 (UTC) |
r-rspectral
|
1.0.0.10-3 |
0 |
0.00
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Spectral Modularity Clustering |
pekkarr
|
2024-04-25 13:38 (UTC) |
r-rsq
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2.6-2 |
0 |
0.00
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R-Squared and Related Measures |
BioArchLinuxBot
|
2024-04-25 09:40 (UTC) |
r-rsqlite
|
2.3.6-1 |
0 |
0.00
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SQLite Interface for R |
pekkarr
|
2024-04-01 00:02 (UTC) |
r-rstan
|
2.32.6-1 |
0 |
0.00
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R Interface to Stan |
BioArchLinuxBot
|
2024-03-05 18:08 (UTC) |
r-rstanarm
|
2.32.1-2 |
0 |
0.00
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Bayesian Applied Regression Modeling via Stan |
BioArchLinuxBot
|
2024-02-08 14:24 (UTC) |
r-rstantools
|
2.4.0-2 |
0 |
0.00
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Tools for Developing R Packages Interfacing with 'Stan' |
BioArchLinuxBot
|
2024-02-05 18:04 (UTC) |
r-rstatix
|
0.7.2-1 |
1 |
0.00
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Pipe-Friendly Framework for Basic Statistical Tests |
BioArchLinuxBot
|
2023-02-02 00:05 (UTC) |
r-rstpm2
|
1.6.3-2 |
0 |
0.00
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Smooth Survival Models, Including Generalized Survival Models |
pekkarr
|
2024-04-25 07:12 (UTC) |
r-rstudioapi
|
0.16.0-1 |
2 |
0.00
|
Safely Access the RStudio API |
greyltc
|
2024-03-25 11:56 (UTC) |
r-rsubread
|
2.18.0-1 |
0 |
0.00
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Mapping, quantification and variant analysis of sequencing data |
BioArchLinuxBot
|
2024-05-02 03:20 (UTC) |
r-rsvd
|
1.0.5-10 |
0 |
0.00
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Randomized Singular Value Decomposition |
BioArchLinuxBot
|
2024-04-24 19:19 (UTC) |
r-rsvg
|
2.6.0-2 |
0 |
0.00
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Render SVG Images into PDF, PNG, (Encapsulated) PostScript, or Bitmap Arrays |
BioArchLinuxBot
|
2024-04-25 07:16 (UTC) |
r-rsvgtipsdevice
|
1.0.7-4 |
0 |
0.00
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An R SVG Graphics Device with Dynamic Tips and Hyperlinks |
BioArchLinuxBot
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2022-06-06 13:40 (UTC) |
r-rsvsim
|
1.44.0-1 |
0 |
0.00
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RSVSim: an R/Bioconductor package for the simulation of structural variations |
BioArchLinuxBot
|
2024-05-03 01:20 (UTC) |
r-rsweep
|
1.16.0-1 |
0 |
0.00
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Functions to creation of low dimensional comparative matrices of Amino Acid Sequence occurrences |
BioArchLinuxBot
|
2024-05-02 04:36 (UTC) |
r-rtca
|
1.56.0-1 |
0 |
0.00
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Open-source toolkit to analyse data from xCELLigence System (RTCA) |
BioArchLinuxBot
|
2024-05-02 12:30 (UTC) |
r-rtcga
|
1.34.0-1 |
0 |
0.00
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The Cancer Genome Atlas Data Integration |
BioArchLinuxBot
|
2024-05-01 21:11 (UTC) |
r-rtcgatoolbox
|
2.34.0-1 |
0 |
0.00
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A new tool for exporting TCGA Firehose data |
BioArchLinuxBot
|
2024-05-03 09:19 (UTC) |
r-rtensor
|
1.4.8-10 |
0 |
0.00
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Tools for Tensor Analysis and Decomposition |
BioArchLinuxBot
|
2024-04-24 21:05 (UTC) |
r-rtexttools
|
1.4.3-2 |
1 |
0.00
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Automatic Text Classification via Supervised Learning |
AlexBocken
|
2023-08-03 08:38 (UTC) |
r-rtkore
|
1.6.10-2 |
0 |
0.00
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'STK++' Core Library Integration to 'R' using 'Rcpp' |
pekkarr
|
2024-04-25 02:41 (UTC) |
r-rtn
|
2.28.0-1 |
0 |
0.00
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RTN: Reconstruction of Transcriptional regulatory Networks and analysis of regulons |
BioArchLinuxBot
|
2024-05-02 19:21 (UTC) |
r-rtnduals
|
1.28.0-1 |
0 |
0.00
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Analysis of co-regulation and inference of 'dual regulons' |
BioArchLinuxBot
|
2024-05-02 22:50 (UTC) |
r-rtnsurvival
|
1.28.0-1 |
0 |
0.00
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Survival analysis using transcriptional networks inferred by the RTN package |
BioArchLinuxBot
|
2024-05-03 00:37 (UTC) |
r-rtopper
|
1.50.0-1 |
0 |
0.00
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This package is designed to perform Gene Set Analysis across multiple genomic platforms |
BioArchLinuxBot
|
2024-05-01 18:40 (UTC) |
r-rtpca
|
1.14.0-1 |
0 |
0.00
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Thermal proximity co-aggregation with R |
BioArchLinuxBot
|
2024-05-01 20:28 (UTC) |
r-rtracklayer
|
1.64.0-1 |
0 |
0.00
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R interface to genome annotation files and the UCSC genome browser |
BioArchLinuxBot
|
2024-05-02 23:36 (UTC) |
r-rtreemix
|
1.66.0-1 |
0 |
0.00
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Rtreemix: Mutagenetic trees mixture models. |
BioArchLinuxBot
|
2024-05-01 21:41 (UTC) |
r-rtriangle
|
1.6.0.13-2 |
0 |
0.00
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Triangle - A 2D Quality Mesh Generator and Delaunay Triangulator |
BioArchLinuxBot
|
2024-03-07 12:08 (UTC) |
r-rtrm
|
1.42.0-1 |
0 |
0.00
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Identification of Transcriptional Regulatory Modules from Protein-Protein Interaction Networks |
BioArchLinuxBot
|
2024-05-02 01:30 (UTC) |
r-rtrmui
|
1.42.0-1 |
0 |
0.00
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A shiny user interface for rTRM |
BioArchLinuxBot
|
2024-05-03 03:39 (UTC) |
r-rtsne
|
0.17-1 |
0 |
0.00
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T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation |
BioArchLinuxBot
|
2023-12-07 12:03 (UTC) |
r-rttf2pt1
|
1.3.12-4 |
0 |
0.00
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'ttf2pt1' Program |
pekkarr
|
2024-04-24 21:47 (UTC) |
r-rugarch
|
1.5.1-3 |
1 |
0.07
|
Univariate GARCH Models |
BioArchLinuxBot
|
2024-04-25 08:29 (UTC) |
r-runibic
|
1.26.0-1 |
0 |
0.00
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runibic: row-based biclustering algorithm for analysis of gene expression data in R |
BioArchLinuxBot
|
2024-05-02 19:42 (UTC) |
r-runit
|
0.4.33-1 |
0 |
0.00
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R Unit Test Framework |
pekkarr
|
2024-03-17 13:17 (UTC) |
r-runjags
|
2.2.2.4-2 |
0 |
0.00
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Interface Utilities, Model Templates, Parallel Computing Methods and Additional Distributions for MCMC Models in JAGS |
BioArchLinuxBot
|
2024-04-10 12:11 (UTC) |
r-rust
|
1.4.2-2 |
0 |
0.00
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Ratio-of-Uniforms Simulation with Transformation |
pekkarr
|
2024-04-25 07:48 (UTC) |
r-rustinr-git
|
r60.b7691f9-1 |
0 |
0.00
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Rust and R Integration |
orphan
|
2020-03-10 00:35 (UTC) |
r-ruv
|
0.9.7.1-4 |
0 |
0.00
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Detect and Remove Unwanted Variation using Negative Controls |
BioArchLinuxBot
|
2022-06-06 13:49 (UTC) |
r-ruvcorr
|
1.36.0-1 |
0 |
0.00
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Removal of unwanted variation for gene-gene correlations and related analysis |
BioArchLinuxBot
|
2024-05-01 19:47 (UTC) |
r-ruvnormalize
|
1.38.0-1 |
0 |
0.00
|
RUV for normalization of expression array data |
BioArchLinuxBot
|
2024-05-01 18:45 (UTC) |
r-ruvnormalizedata
|
1.24.0-1 |
0 |
0.00
|
Gender data for the RUVnormalize package |
BioArchLinuxBot
|
2024-05-04 00:40 (UTC) |
r-ruvseq
|
1.38.0-1 |
0 |
0.00
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Remove Unwanted Variation from RNA-Seq Data |
BioArchLinuxBot
|
2024-05-03 04:15 (UTC) |
r-rvenn
|
1.1.0-1 |
0 |
0.00
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Set Operations for Many Sets |
BioArchLinuxBot
|
2022-09-17 06:59 (UTC) |
r-rversions
|
2.1.2-5 |
1 |
0.00
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Query 'R' Versions, Including 'r-release' and 'r-oldrel' |
BioArchLinuxBot
|
2022-11-26 12:25 (UTC) |
r-rvest
|
1.0.4-1 |
0 |
0.00
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Easily Harvest (Scrape) Web Pages |
alhirzel
|
2024-03-19 03:13 (UTC) |
r-rvg
|
0.3.3-1 |
0 |
0.00
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R Graphics Devices for Vector Graphics Output |
BioArchLinuxBot
|
2023-05-10 12:06 (UTC) |
r-rvinecopulib
|
0.6.3.1.1-3 |
0 |
0.00
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High Performance Algorithms for Vine Copula Modeling |
pekkarr
|
2024-04-26 01:13 (UTC) |
r-rvisdiff
|
1.2.0-1 |
0 |
0.00
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Interactive Graphs for Differential Expression |
pekkarr
|
2024-05-02 05:46 (UTC) |
r-rvs
|
1.26.0-1 |
0 |
0.00
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Computes estimates of the probability of related individuals sharing a rare variant |
BioArchLinuxBot
|
2024-05-11 12:11 (UTC) |
r-rwave
|
2.6.5-3 |
0 |
0.00
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Time-Frequency Analysis of 1-D Signals |
BioArchLinuxBot
|
2024-03-15 14:19 (UTC) |
r-rweka
|
0.4.46-1 |
0 |
0.00
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R/Weka Interface |
BioArchLinuxBot
|
2023-03-07 18:02 (UTC) |
r-rwekajars
|
3.9.3.2-8 |
0 |
0.00
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R/Weka Interface Jars |
BioArchLinuxBot
|
2024-04-11 18:10 (UTC) |
r-rwikipathways
|
1.24.0-1 |
0 |
0.00
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rWikiPathways - R client library for the WikiPathways API |
BioArchLinuxBot
|
2024-05-01 20:11 (UTC) |
r-s2
|
1.1.6-1 |
0 |
0.00
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Spherical Geometry Operators Using the S2 Geometry Library |
peippo
|
2023-12-20 14:03 (UTC) |
r-s4arrays
|
1.4.1-1 |
0 |
0.00
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Foundation of array-like containers in Bioconductor |
BioArchLinuxBot
|
2024-05-22 18:04 (UTC) |
r-s4vd
|
1.1.1-3 |
0 |
0.00
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Biclustering via Sparse Singular Value Decomposition Incorporating Stability Selection |
BioArchLinuxBot
|
2022-06-06 13:54 (UTC) |
r-s4vectors
|
0.40.2-1 |
0 |
0.00
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Foundation of vector-like and list-like containers in Bioconductor |
greyltc
|
2024-04-09 12:16 (UTC) |
r-safe
|
3.44.0-1 |
0 |
0.00
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Significance Analysis of Function and Expression |
BioArchLinuxBot
|
2024-05-02 01:31 (UTC) |
r-safetensors
|
0.1.2-3 |
0 |
0.00
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Safetensors File Format |
pekkarr
|
2024-04-24 23:45 (UTC) |
r-sagenhaft
|
1.74.0-1 |
0 |
0.00
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Collection of functions for reading and comparing SAGE libraries |
BioArchLinuxBot
|
2024-05-02 04:28 (UTC) |
r-saigegds
|
2.4.0-1 |
0 |
0.00
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Scalable Implementation of Generalized mixed models using GDS files in Phenome-Wide Association Studies |
BioArchLinuxBot
|
2024-05-10 12:02 (UTC) |
r-sampleclassifier
|
1.28.0-1 |
0 |
0.00
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Sample Classifier |
BioArchLinuxBot
|
2024-05-03 12:55 (UTC) |
r-sampleselection
|
1.2.12-3 |
0 |
0.00
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Sample Selection Models |
pekkarr
|
2024-04-25 21:31 (UTC) |
r-sampling
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2.10-2 |
0 |
0.00
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Survey Sampling |
BioArchLinuxBot
|
2024-04-08 18:10 (UTC) |
r-samplingbook
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1.2.4-3 |
0 |
0.00
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Survey Sampling Procedures |
pekkarr
|
2024-04-25 10:22 (UTC) |
r-sampsurf
|
0.7.6-3 |
0 |
0.00
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Sampling Surface Simulation for Areal Sampling Methods |
BioArchLinuxBot
|
2022-06-07 13:20 (UTC) |
r-samspectral
|
1.58.0-1 |
0 |
0.00
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Identifies cell population in flow cytometry data |
BioArchLinuxBot
|
2024-05-02 03:19 (UTC) |
r-sandwich
|
3.1.0-2 |
0 |
0.00
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Robust Covariance Matrix Estimators |
BioArchLinuxBot
|
2024-04-07 18:09 (UTC) |
r-sangeranalyser
|
1.14.0-1 |
0 |
0.00
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sangeranalyseR: a suite of functions for the analysis of Sanger sequence data in R |
BioArchLinuxBot
|
2024-05-03 18:50 (UTC) |
r-sangerseqr
|
1.40.0-1 |
0 |
0.00
|
Tools for Sanger Sequencing Data in R |
BioArchLinuxBot
|
2024-05-03 18:09 (UTC) |
r-santa
|
2.38.0-1 |
0 |
0.00
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Spatial Analysis of Network Associations |
BioArchLinuxBot
|
2023-10-26 00:01 (UTC) |
r-sarc
|
1.2.0-1 |
0 |
0.00
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Statistical Analysis of Regions with CNVs |
pekkarr
|
2024-05-03 12:50 (UTC) |
r-sarks
|
1.16.0-1 |
0 |
0.00
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Suffix Array Kernel Smoothing for discovery of correlative sequence motifs and multi-motif domains |
BioArchLinuxBot
|
2024-05-02 00:25 (UTC) |
r-sass
|
0.4.9-1 |
0 |
0.00
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Syntactically Awesome Style Sheets ('Sass') |
pekkarr
|
2024-03-16 00:09 (UTC) |
r-saturn
|
1.12.0-1 |
0 |
0.00
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Scalable Analysis of Differential Transcript Usage for Bulk and Single-Cell RNA-sequencing Applications |
BioArchLinuxBot
|
2024-05-02 19:39 (UTC) |
r-saver
|
1.1.2-4 |
0 |
0.00
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Single-Cell RNA-Seq Gene Expression Recovery |
BioArchLinuxBot
|
2022-06-06 14:00 (UTC) |
r-savr
|
1.37.0-3 |
0 |
0.00
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Parse and analyze Illumina SAV files |
BioArchLinuxBot
|
2023-10-27 04:04 (UTC) |
r-sbgnview
|
1.18.0-1 |
0 |
0.00
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"SBGNview: Data Analysis, Integration and Visualization on SBGN Pathways" |
BioArchLinuxBot
|
2024-05-02 23:34 (UTC) |
r-sbgnview.data
|
1.18.0-1 |
0 |
0.00
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Supporting datasets for SBGNview package |
BioArchLinuxBot
|
2024-05-03 07:57 (UTC) |
r-sbmlr
|
2.0.0-1 |
0 |
0.00
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SBML-R Interface and Analysis Tools |
BioArchLinuxBot
|
2024-05-02 04:33 (UTC) |
r-sc3
|
1.32.0-1 |
0 |
0.00
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Single-Cell Consensus Clustering |
BioArchLinuxBot
|
2024-05-02 21:25 (UTC) |
r-scale4c
|
1.26.0-1 |
0 |
0.00
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Scale4C: an R/Bioconductor package for scale-space transformation of 4C-seq data |
BioArchLinuxBot
|
2024-05-02 19:24 (UTC) |
r-scaledmatrix
|
1.12.0-1 |
0 |
0.00
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Creating a DelayedMatrix of Scaled and Centered Values |
BioArchLinuxBot
|
2024-05-01 22:32 (UTC) |
r-scales
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1.3.0-1 |
2 |
0.00
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Scale Functions for Visualization |
greyltc
|
2023-11-29 11:40 (UTC) |
r-scalign
|
1.12.0-4 |
0 |
0.00
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An alignment and integration method for single cell genomics |
BioArchLinuxBot
|
2023-04-29 05:24 (UTC) |
r-scam
|
1.2.16-2 |
0 |
0.00
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Shape Constrained Additive Models |
BioArchLinuxBot
|
2024-03-16 12:03 (UTC) |
r-scan.upc
|
2.46.0-1 |
0 |
0.00
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Single-channel array normalization (SCAN) and Universal exPression Codes (UPC) |
BioArchLinuxBot
|
2024-05-03 13:53 (UTC) |
r-scanmir
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1.10.0-1 |
0 |
0.00
|
scanMiR |
BioArchLinuxBot
|
2024-05-03 18:10 (UTC) |
r-scanmirapp
|
1.10.0-1 |
0 |
0.00
|
scanMiR shiny application |
BioArchLinuxBot
|
2024-05-07 12:09 (UTC) |
r-scanmirdata
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1.10.0-1 |
0 |
0.00
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miRNA Affinity models for the scanMiR package |
BioArchLinuxBot
|
2024-05-03 18:31 (UTC) |
r-scannotatr
|
1.10.0-1 |
0 |
0.00
|
Pretrained learning models for cell type prediction on single cell RNA-sequencing data |
BioArchLinuxBot
|
2024-05-02 23:57 (UTC) |
r-scanvis
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1.18.0-1 |
0 |
0.00
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SCANVIS - a tool for SCoring, ANnotating and VISualizing splice junctions |
BioArchLinuxBot
|
2024-05-03 01:00 (UTC) |
r-scarray
|
1.12.0-1 |
0 |
0.00
|
Large-scale single-cell RNA-seq data manipulation with GDS files |
BioArchLinuxBot
|
2024-05-02 21:20 (UTC) |
r-scarray.sat
|
1.4.0-1 |
0 |
0.00
|
Large-scale single-cell RNA-seq data analysis using GDS files and Seurat |
pekkarr
|
2024-05-03 00:09 (UTC) |
r-scate
|
1.12.0-1 |
0 |
0.00
|
Single-cell ATAC-seq Signal Extraction and Enhancement |
BioArchLinuxBot
|
2024-04-13 18:21 (UTC) |
r-scatedata
|
1.12.0-1 |
0 |
0.00
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Data for SCATE (Single-cell ATAC-seq Signal Extraction and Enhancement) |
BioArchLinuxBot
|
2024-04-13 18:13 (UTC) |
r-scater
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1.32.0-1 |
0 |
0.00
|
Single-Cell Analysis Toolkit for Gene Expression Data in R |
BioArchLinuxBot
|
2024-05-03 00:06 (UTC) |
r-scatterhatch
|
1.10.0-1 |
0 |
0.00
|
Creates hatched patterns for scatterplots |
BioArchLinuxBot
|
2024-05-01 20:26 (UTC) |
r-scattermore
|
1.2-1 |
0 |
0.00
|
Scatterplots with More Points |
BioArchLinuxBot
|
2023-06-12 12:01 (UTC) |
r-scatterpie
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0.2.2-1 |
0 |
0.00
|
Scatter Pie Plot |
BioArchLinuxBot
|
2024-04-03 18:03 (UTC) |
r-scatterplot3d
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0.3.44-3 |
0 |
0.00
|
3D Scatter Plot |
BioArchLinuxBot
|
2024-04-24 19:04 (UTC) |
r-scbfa
|
1.18.0-1 |
0 |
0.00
|
A dimensionality reduction tool using gene detection pattern to mitigate noisy expression profile of scRNA-seq |
BioArchLinuxBot
|
2024-05-03 13:39 (UTC) |
r-scbn
|
1.22.0-1 |
0 |
0.00
|
A statistical normalization method and differential expression analysis for RNA-seq data between different species |
BioArchLinuxBot
|
2024-05-02 03:14 (UTC) |
r-scbubbletree
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1.6.0-1 |
0 |
0.00
|
Quantitative visual exploration of scRNA-seq data |
pekkarr
|
2024-05-02 05:55 (UTC) |
r-sccb2
|
1.14.0-1 |
0 |
0.00
|
CB2 improves power of cell detection in droplet-based single-cell RNA sequencing data |
BioArchLinuxBot
|
2024-05-03 01:56 (UTC) |
r-scclassifr
|
1.2.0-3 |
0 |
0.00
|
Pretrained learning models for cell type prediction on single cell RNA-sequencing data |
BioArchLinuxBot
|
2022-06-07 13:21 (UTC) |
r-scclassify
|
1.14.0-1 |
0 |
0.00
|
scClassify: single-cell Hierarchical Classification |
BioArchLinuxBot
|
2023-10-28 13:37 (UTC) |
r-sccomp
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1.8.0-1 |
0 |
0.00
|
Robust Outlier-aware Estimation of Composition and Heterogeneity for Single-cell Data |
pekkarr
|
2024-05-05 12:16 (UTC) |
r-scdataviz
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1.14.0-1 |
0 |
0.00
|
scDataviz: single cell dataviz and downstream analyses |
BioArchLinuxBot
|
2024-05-02 23:56 (UTC) |
r-scdblfinder
|
1.18.0-1 |
0 |
0.00
|
scDblFinder |
BioArchLinuxBot
|
2024-05-03 01:40 (UTC) |
r-scdd
|
1.28.0-1 |
0 |
0.00
|
Mixture modeling of single-cell RNA-seq data to identify genes with differential distributions |
BioArchLinuxBot
|
2024-05-03 01:34 (UTC) |
r-scddboost
|
1.6.0-1 |
0 |
0.00
|
A compositional model to assess expression changes from single-cell rna-seq data |
pekkarr
|
2024-05-02 21:56 (UTC) |
r-scde
|
2.32.0-1 |
0 |
0.00
|
Single Cell Differential Expression |
BioArchLinuxBot
|
2024-05-01 22:45 (UTC) |
r-scdesign3
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1.2.0-1 |
0 |
0.00
|
A unified framework of realistic in silico data generation and statistical model inference for single-cell and spatial omics |
pekkarr
|
2024-05-05 12:05 (UTC) |
r-scds
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1.20.0-1 |
0 |
0.00
|
In-Silico Annotation of Doublets for Single Cell RNA Sequencing Data |
BioArchLinuxBot
|
2024-05-02 21:36 (UTC) |
r-scfa
|
1.14.0-1 |
0 |
0.00
|
SCFA: Subtyping via Consensus Factor Analysis |
BioArchLinuxBot
|
2024-05-01 21:31 (UTC) |
r-scfeaturefilter
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1.24.0-1 |
0 |
0.00
|
A correlation-based method for quality filtering of single-cell RNAseq data |
BioArchLinuxBot
|
2024-05-01 20:26 (UTC) |
r-scfeatures
|
1.4.0-1 |
0 |
0.00
|
Multi-view representations of single-cell and spatial data for disease outcome prediction |
pekkarr
|
2024-05-03 18:38 (UTC) |
r-scgps
|
1.18.0-1 |
0 |
0.00
|
A complete analysis of single cell subpopulations, from identifying subpopulations to analysing their relationship (scGPS = single cell Global Predictions of Subpopulation) |
BioArchLinuxBot
|
2024-05-02 22:18 (UTC) |
r-schex
|
1.18.0-1 |
0 |
0.00
|
Hexbin plots for single cell omics data |
BioArchLinuxBot
|
2024-05-02 23:55 (UTC) |
r-schot
|
1.16.0-1 |
0 |
0.00
|
single-cell higher order testing |
BioArchLinuxBot
|
2024-05-02 21:27 (UTC) |
r-schrute
|
1.0.1-2 |
1 |
0.00
|
The Entire Transcript from the Office in Tidy Format |
AlexBocken
|
2023-08-03 08:43 (UTC) |
r-scico
|
1.5.0-1 |
0 |
0.00
|
Colour Palettes Based on the Scientific Colour-Maps |
BioArchLinuxBot
|
2023-08-14 18:02 (UTC) |
r-scider
|
1.2.0-1 |
0 |
0.00
|
Spatial cell-type inter-correlation by density in R |
pekkarr
|
2024-05-03 09:11 (UTC) |
r-scifer
|
1.6.0-1 |
0 |
0.00
|
Single-Cell Immunoglobulin Filtering of Sanger Sequences |
pekkarr
|
2024-05-03 18:30 (UTC) |
r-sciplot
|
1.2.0-4 |
0 |
0.00
|
Scientific Graphing Functions for Factorial Designs |
BioArchLinuxBot
|
2024-04-05 18:09 (UTC) |
r-scisi
|
1.68.0-4 |
0 |
0.00
|
In Silico Interactome |
BioArchLinuxBot
|
2022-11-04 06:34 (UTC) |
r-scmageck
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1.9.1-4 |
0 |
0.00
|
Identify genes associated with multiple expression phenotypes in single-cell CRISPR screening data |
BioArchLinuxBot
|
2023-04-29 05:01 (UTC) |
r-scmap
|
1.26.0-1 |
0 |
0.00
|
A tool for unsupervised projection of single cell RNA-seq data |
BioArchLinuxBot
|
2024-05-02 21:29 (UTC) |
r-scmerge
|
1.20.0-1 |
0 |
0.00
|
scMerge: Merging multiple batches of scRNA-seq data |
BioArchLinuxBot
|
2024-05-03 04:01 (UTC) |
r-scmet
|
1.6.0-1 |
0 |
0.00
|
Bayesian modelling of cell-to-cell DNA methylation heterogeneity |
pekkarr
|
2024-05-02 21:48 (UTC) |
r-scmeth
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1.24.0-1 |
0 |
0.00
|
Functions to conduct quality control analysis in methylation data |
BioArchLinuxBot
|
2024-05-03 05:34 (UTC) |
r-scnorm
|
1.26.0-1 |
0 |
0.00
|
Normalization of single cell RNA-seq data |
BioArchLinuxBot
|
2024-05-02 21:36 (UTC) |
r-scone
|
1.28.0-1 |
0 |
0.00
|
Single Cell Overview of Normalized Expression data |
BioArchLinuxBot
|
2024-05-03 05:30 (UTC) |
r-sconify
|
1.24.0-1 |
0 |
0.00
|
A toolkit for performing KNN-based statistics for flow and mass cytometry data |
BioArchLinuxBot
|
2024-05-01 20:20 (UTC) |
r-scope
|
1.16.0-1 |
0 |
0.00
|
A normalization and copy number estimation method for single-cell DNA sequencing |
BioArchLinuxBot
|
2024-05-03 03:23 (UTC) |
r-scoreinvhap
|
1.26.0-1 |
0 |
0.00
|
Get inversion status in predefined regions |
BioArchLinuxBot
|
2024-05-03 04:59 (UTC) |
r-scoringrules
|
1.1.1-4 |
0 |
0.00
|
Scoring Rules for Parametric and Simulated Distribution Forecasts |
pekkarr
|
2024-04-25 07:53 (UTC) |
r-scp
|
1.14.0-1 |
0 |
0.00
|
Mass Spectrometry-Based Single-Cell Proteomics Data Analysis |
BioArchLinuxBot
|
2024-05-05 12:19 (UTC) |
r-scpca
|
1.18.0-1 |
0 |
0.00
|
Sparse Contrastive Principal Component Analysis |
BioArchLinuxBot
|
2024-05-02 00:48 (UTC) |
r-scpipe
|
2.4.0-1 |
0 |
0.00
|
pipeline for single cell RNA-seq data analysis |
BioArchLinuxBot
|
2024-05-03 01:58 (UTC) |
r-scran
|
1.32.0-1 |
0 |
0.00
|
Methods for Single-Cell RNA-Seq Data Analysis |
BioArchLinuxBot
|
2024-05-03 00:05 (UTC) |
r-screclassify
|
1.10.0-1 |
0 |
0.00
|
scReClassify: post hoc cell type classification of single-cell RNA-seq data |
BioArchLinuxBot
|
2024-05-02 21:28 (UTC) |
r-screcover
|
1.20.0-1 |
0 |
0.00
|
scRecover for imputation of single-cell RNA-seq data |
BioArchLinuxBot
|
2024-05-01 23:51 (UTC) |
r-screencounter
|
1.4.0-1 |
0 |
0.00
|
Counting Reads in High-Throughput Sequencing Screens |
pekkarr
|
2024-05-02 20:05 (UTC) |
r-screenr
|
1.6.0-1 |
0 |
0.00
|
Package to Perform High Throughput Biological Screening |
pekkarr
|
2024-05-02 05:48 (UTC) |
r-screpertoire
|
2.0.0-1 |
0 |
0.00
|
A toolkit for single-cell immune receptor profiling |
BioArchLinuxBot
|
2024-05-05 12:20 (UTC) |
r-scrime
|
1.3.5-10 |
0 |
0.00
|
Analysis of High-Dimensional Categorical Data Such as SNP Data |
BioArchLinuxBot
|
2024-03-15 14:11 (UTC) |
r-scrnaseq
|
2.18.0-1 |
0 |
0.00
|
Collection of Public Single-Cell RNA-Seq Datasets |
BioArchLinuxBot
|
2024-05-04 18:38 (UTC) |
r-scrnaseqapp
|
1.4.0-1 |
0 |
0.00
|
A single-cell RNAseq Shiny app-package |
pekkarr
|
2024-05-05 12:17 (UTC) |
r-scruff
|
1.22.0-1 |
0 |
0.00
|
Single Cell RNA-Seq UMI Filtering Facilitator (scruff) |
BioArchLinuxBot
|
2024-05-03 13:32 (UTC) |
r-scry
|
1.16.0-1 |
0 |
0.00
|
Small-Count Analysis Methods for High-Dimensional Data |
BioArchLinuxBot
|
2024-05-02 21:40 (UTC) |
r-scrypt
|
0.1.6-3 |
0 |
0.00
|
Key Derivation Functions for R Based on Scrypt |
pekkarr
|
2024-04-25 02:37 (UTC) |
r-scs
|
3.2.4-4 |
0 |
0.00
|
Splitting Conic Solver |
BioArchLinuxBot
|
2024-04-24 21:03 (UTC) |
r-scshapes
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1.10.0-1 |
0 |
0.00
|
A Statistical Framework for Modeling and Identifying Differential Distributions in Single-cell RNA-sequencing Data |
BioArchLinuxBot
|
2024-05-01 19:50 (UTC) |
r-sctensor
|
2.14.0-1 |
0 |
0.00
|
Detection of cell-cell interaction from single-cell RNA-seq dataset by tensor decomposition |
BioArchLinuxBot
|
2024-05-03 14:38 (UTC) |
r-sctgif
|
1.18.0-1 |
0 |
0.00
|
Cell type annotation for unannotated single-cell RNA-Seq data |
BioArchLinuxBot
|
2024-05-03 12:53 (UTC) |
r-scthi
|
1.16.0-1 |
0 |
0.00
|
Indentification of significantly activated ligand-receptor interactions across clusters of cells from single-cell RNA sequencing data |
BioArchLinuxBot
|
2024-05-01 19:49 (UTC) |
r-sctransform
|
0.4.1-1 |
0 |
0.00
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Variance Stabilizing Transformations for Single Cell UMI Data |
BioArchLinuxBot
|
2023-10-19 06:01 (UTC) |
r-sctreeviz
|
1.10.0-1 |
0 |
0.00
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R/Bioconductor package to interactively explore and visualize single cell RNA-seq datasets with hierarhical annotations |
BioArchLinuxBot
|
2024-05-03 14:45 (UTC) |
r-scuttle
|
1.14.0-1 |
0 |
0.00
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Single-Cell RNA-Seq Analysis Utilities |
BioArchLinuxBot
|
2024-05-02 21:18 (UTC) |
r-scvir
|
1.4.0-1 |
0 |
0.00
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experimental inferface from R to scvi-tools |
pekkarr
|
2024-05-03 01:55 (UTC) |
r-sdams
|
1.24.0-1 |
0 |
0.00
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Differential Abundant/Expression Analysis for Metabolomics, Proteomics and single-cell RNA sequencing Data |
BioArchLinuxBot
|
2024-05-02 19:09 (UTC) |
r-sde
|
2.0.18-1 |
0 |
0.00
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Simulation and Inference for Stochastic Differential Equations |
AlexBocken
|
2024-01-11 20:26 (UTC) |
r-sechm
|
1.12.0-1 |
0 |
0.00
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sechm: Complex Heatmaps from a SummarizedExperiment |
BioArchLinuxBot
|
2024-05-02 20:26 (UTC) |
r-segmented
|
2.1.0-1 |
0 |
0.00
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Regression Models with Break-Points / Change-Points Estimation (with Possibly Random Effects) |
BioArchLinuxBot
|
2024-05-14 12:01 (UTC) |
r-segmenter
|
1.10.0-1 |
0 |
0.00
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Perform Chromatin Segmentation Analysis in R by Calling ChromHMM |
BioArchLinuxBot
|
2024-05-03 04:23 (UTC) |
r-segmentseq
|
2.38.0-1 |
0 |
0.00
|
Methods for identifying small RNA loci from high-throughput sequencing data |
BioArchLinuxBot
|
2024-05-03 01:26 (UTC) |
r-selectksigs
|
1.16.0-1 |
0 |
0.00
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Selecting the number of mutational signatures using a perplexity-based measure and cross-validation |
BioArchLinuxBot
|
2024-05-03 05:20 (UTC) |
r-selectr
|
0.4.2-2 |
0 |
0.00
|
Translate CSS Selectors to XPath Expressions |
alhirzel
|
2021-05-26 01:23 (UTC) |
r-selex
|
1.36.0-1 |
0 |
0.00
|
Functions for analyzing SELEX-seq data |
BioArchLinuxBot
|
2024-05-02 00:28 (UTC) |
r-sem
|
3.1.15-4 |
0 |
0.00
|
Structural Equation Models |
BioArchLinuxBot
|
2022-06-06 14:33 (UTC) |
r-semdist
|
1.38.0-1 |
0 |
0.00
|
Information Accretion-based Function Predictor Evaluation |
BioArchLinuxBot
|
2024-05-03 12:12 (UTC) |