r-seq2pathway
|
1.36.0-1 |
0 |
0.00
|
a novel tool for functional gene-set (or termed as pathway) analysis of next-generation sequencing data |
BioArchLinuxBot
|
2024-05-02 23:16 (UTC) |
r-seq2pathway.data
|
1.36.0-1 |
0 |
0.00
|
data set for R package seq2pathway |
BioArchLinuxBot
|
2024-05-04 00:14 (UTC) |
r-seqarchr
|
1.8.0-1 |
0 |
0.00
|
Identify Different Architectures of Sequence Elements |
pekkarr
|
2024-05-02 18:36 (UTC) |
r-seqarchrplus
|
1.4.0-1 |
0 |
0.00
|
Downstream analyses of promoter sequence architectures and HTML report generation |
pekkarr
|
2024-05-03 04:24 (UTC) |
r-seqarray
|
1.44.0-1 |
0 |
0.00
|
Data management of large-scale whole-genome sequence variant calls |
BioArchLinuxBot
|
2024-05-02 00:09 (UTC) |
r-seqbias
|
1.50.0-1 |
0 |
0.00
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Estimation of per-position bias in high-throughput sequencing data |
BioArchLinuxBot
|
2023-10-26 02:57 (UTC) |
r-seqcat
|
1.26.0-1 |
0 |
0.00
|
High Throughput Sequencing Cell Authentication Toolkit |
BioArchLinuxBot
|
2024-05-03 04:49 (UTC) |
r-seqcna
|
1.48.0-1 |
0 |
0.00
|
Copy number analysis of high-throughput sequencing cancer data |
BioArchLinuxBot
|
2023-10-25 22:08 (UTC) |
r-seqcna.annot
|
1.38.0-2 |
0 |
0.00
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Annotation for the copy number analysis of deep sequencing cancer data with seqCNA |
BioArchLinuxBot
|
2024-03-15 14:10 (UTC) |
r-seqcombo
|
1.26.0-1 |
0 |
0.00
|
Visualization Tool for Sequence Recombination and Reassortment |
BioArchLinuxBot
|
2024-05-01 21:30 (UTC) |
r-seqgate
|
1.14.0-1 |
0 |
0.00
|
Filtering of Lowly Expressed Features |
BioArchLinuxBot
|
2024-05-02 19:32 (UTC) |
r-seqgsea
|
1.44.0-1 |
0 |
0.00
|
Gene Set Enrichment Analysis (GSEA) of RNA-Seq Data: integrating differential expression and splicing |
BioArchLinuxBot
|
2024-05-02 23:07 (UTC) |
r-seqinr
|
4.2.36-1 |
0 |
0.00
|
Biological Sequences Retrieval and Analysis |
BioArchLinuxBot
|
2023-12-08 18:03 (UTC) |
r-seqlogo
|
1.70.0-1 |
0 |
0.00
|
Sequence logos for DNA sequence alignments |
BioArchLinuxBot
|
2024-05-02 03:17 (UTC) |
r-seqmagick
|
0.1.7-2 |
0 |
0.00
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Sequence Manipulation Utilities |
BioArchLinuxBot
|
2024-04-26 14:22 (UTC) |
r-seqminer
|
9.4-1 |
0 |
0.00
|
Efficiently Read Sequence Data (VCF Format, BCF Format, METAL Format and BGEN Format) into R |
BioArchLinuxBot
|
2024-02-03 18:02 (UTC) |
r-seqpattern
|
1.36.0-1 |
0 |
0.00
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Visualising oligonucleotide patterns and motif occurrences across a set of sorted sequences |
BioArchLinuxBot
|
2024-05-02 00:07 (UTC) |
r-seqsetvis
|
1.24.0-1 |
0 |
0.00
|
Set Based Visualizations for Next-Gen Sequencing Data |
BioArchLinuxBot
|
2024-05-03 01:06 (UTC) |
r-seqsqc
|
1.26.0-1 |
0 |
0.00
|
A bioconductor package for sample quality check with next generation sequencing data |
BioArchLinuxBot
|
2024-05-02 20:42 (UTC) |
r-seqtools
|
1.38.0-1 |
0 |
0.00
|
Analysis of nucleotide, sequence and quality content on fastq files |
BioArchLinuxBot
|
2024-05-02 05:10 (UTC) |
r-seqvartools
|
1.42.0-1 |
0 |
0.00
|
Tools for variant data |
BioArchLinuxBot
|
2024-05-02 01:53 (UTC) |
r-seriation
|
1.5.5-1 |
0 |
0.00
|
Infrastructure for Ordering Objects Using Seriation |
BioArchLinuxBot
|
2024-04-18 00:02 (UTC) |
r-servr
|
0.30-1 |
0 |
0.00
|
A Simple HTTP Server to Serve Static Files or Dynamic Documents |
BioArchLinuxBot
|
2024-03-23 18:06 (UTC) |
r-sesame
|
1.22.0-1 |
0 |
0.00
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SEnsible Step-wise Analysis of DNA MEthylation BeadChips |
BioArchLinuxBot
|
2024-05-03 09:24 (UTC) |
r-sesamedata
|
1.22.0-1 |
0 |
0.00
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Supporting Data for SeSAMe Package |
BioArchLinuxBot
|
2024-05-03 08:24 (UTC) |
r-sessioninfo
|
1.2.2-7 |
1 |
0.00
|
R Session Information |
BioArchLinuxBot
|
2022-10-18 12:34 (UTC) |
r-setools
|
1.18.0-1 |
0 |
0.00
|
SEtools: tools for working with SummarizedExperiment |
BioArchLinuxBot
|
2024-05-03 13:51 (UTC) |
r-setrng
|
2024.2.1-1 |
0 |
0.00
|
Set (Normal) Random Number Generator and Seed |
BioArchLinuxBot
|
2024-02-18 18:02 (UTC) |
r-sets
|
1.0.25-2 |
0 |
0.00
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Generalized Sets, Customizable Sets and Intervals |
BioArchLinuxBot
|
2024-03-14 18:13 (UTC) |
r-settings
|
0.2.7-9 |
0 |
0.00
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Software Option Settings Manager for R |
BioArchLinuxBot
|
2024-02-08 18:02 (UTC) |
r-seurat
|
5.1.0-1 |
0 |
0.00
|
Tools for Single Cell Genomics |
BioArchLinuxBot
|
2024-05-11 12:16 (UTC) |
r-seuratobject
|
5.0.2-1 |
0 |
0.00
|
Data Structures for Single Cell Data |
BioArchLinuxBot
|
2024-05-08 18:14 (UTC) |
r-sevenbridges
|
1.34.0-1 |
0 |
0.00
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Seven Bridges Platform API Client and Common Workflow Language Tool Builder in R |
BioArchLinuxBot
|
2024-05-01 20:02 (UTC) |
r-sevenc
|
1.24.0-1 |
0 |
0.00
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Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs |
BioArchLinuxBot
|
2024-05-03 01:14 (UTC) |
r-sf
|
1.0.16-1 |
1 |
0.00
|
Simple Features for R |
peippo
|
2024-03-25 11:53 (UTC) |
r-sfarrow
|
0.4.1-3 |
0 |
0.00
|
Read/Write Simple Feature Objects ('sf') with 'Apache' 'Arrow' |
pekkarr
|
2024-04-25 13:02 (UTC) |
r-sfedata
|
1.6.0-1 |
0 |
0.00
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Example SpatialFeatureExperiment datasets |
pekkarr
|
2024-05-04 18:25 (UTC) |
r-sfheaders
|
0.4.4-1 |
0 |
0.00
|
Converts Between R Objects and Simple Feature Objects |
peippo
|
2024-01-18 12:00 (UTC) |
r-sfsmisc
|
1.1.18-1 |
0 |
0.00
|
Utilities from 'Seminar fuer Statistik' ETH Zurich |
pekkarr
|
2024-04-25 18:09 (UTC) |
r-sftime
|
0.2.0-1 |
0 |
0.00
|
Classes and Methods for Simple Feature Objects that Have a Time Column |
BioArchLinuxBot
|
2022-10-20 18:01 (UTC) |
r-sgcp
|
1.2.0-4 |
0 |
0.00
|
A semi-supervised pipeline for gene clustering using self-training approach in gene co-expression networks |
pekkarr
|
2024-04-28 20:21 (UTC) |
r-sgeostat
|
1.0.27-8 |
0 |
0.00
|
An Object-Oriented Framework for Geostatistical Modeling in S+ |
BioArchLinuxBot
|
2024-04-24 22:15 (UTC) |
r-sgseq
|
1.38.0-1 |
0 |
0.00
|
Splice event prediction and quantification from RNA-seq data |
BioArchLinuxBot
|
2024-05-03 02:29 (UTC) |
r-sgt
|
2.0-5 |
0 |
0.00
|
Skewed Generalized T Distribution Tree |
BioArchLinuxBot
|
2022-06-06 14:50 (UTC) |
r-sha3sum
|
1.2.2-1 |
0 |
0.00
|
sha3 cli (build using Rust): Print or check SHA3 digests. Commands and options are similar to the GNU Linux command shaXXXsum. |
kurdy
|
2023-02-11 00:55 (UTC) |
r-shades
|
1.4.0-9 |
0 |
0.00
|
Simple Colour Manipulation |
BioArchLinuxBot
|
2024-03-01 06:03 (UTC) |
r-shadowtext
|
0.1.3-1 |
0 |
0.00
|
Shadow Text Grob and Layer |
BioArchLinuxBot
|
2024-01-19 06:02 (UTC) |
r-shape
|
1.4.6.1-1 |
1 |
0.00
|
Functions for Plotting Graphical Shapes, Colors |
BioArchLinuxBot
|
2024-02-23 20:06 (UTC) |
r-sharedobject
|
1.18.0-1 |
0 |
0.00
|
Sharing R objects across multiple R processes without memory duplication |
BioArchLinuxBot
|
2024-05-02 05:05 (UTC) |
r-shiny
|
1.8.1.1-1 |
0 |
0.00
|
Web Application Framework for R |
BioArchLinuxBot
|
2024-04-02 18:25 (UTC) |
r-shinyace
|
0.4.2-1 |
0 |
0.00
|
Ace Editor Bindings for Shiny |
BioArchLinuxBot
|
2022-06-06 14:52 (UTC) |
r-shinyalert
|
3.1.0-1 |
0 |
0.00
|
Easily Create Pretty Popup Messages (Modals) in 'Shiny' |
BioArchLinuxBot
|
2024-04-28 00:06 (UTC) |
r-shinybs
|
0.61.1-5 |
0 |
0.00
|
Twitter Bootstrap Components for Shiny |
BioArchLinuxBot
|
2022-06-06 14:54 (UTC) |
r-shinybusy
|
0.3.3-1 |
0 |
0.00
|
Busy Indicator for 'Shiny' Applications |
BioArchLinuxBot
|
2024-03-10 05:11 (UTC) |
r-shinycssloaders
|
1.0.0-4 |
0 |
0.00
|
Add Loading Animations to a 'shiny' Output While It's Recalculating |
BioArchLinuxBot
|
2022-06-06 14:54 (UTC) |
r-shinycustomloader
|
0.9.0-4 |
0 |
0.00
|
Custom Loader for Shiny Outputs |
BioArchLinuxBot
|
2022-06-06 14:55 (UTC) |
r-shinycyjs
|
1.0.0-1 |
0 |
0.00
|
Create Interactive Network Visualizations in R and 'shiny' |
pekkarr
|
2024-04-12 15:06 (UTC) |
r-shinydashboard
|
0.7.2-4 |
0 |
0.00
|
Create Dashboards with 'Shiny' |
BioArchLinuxBot
|
2022-06-06 14:55 (UTC) |
r-shinydashboardplus
|
2.0.4-1 |
0 |
0.00
|
Add More 'AdminLTE2' Components to 'shinydashboard' |
BioArchLinuxBot
|
2024-04-10 00:03 (UTC) |
r-shinydisconnect
|
0.1.1-1 |
0 |
0.00
|
Show a Nice Message When a 'Shiny' App Disconnects or Errors |
BioArchLinuxBot
|
2023-08-21 12:05 (UTC) |
r-shinyepico
|
1.12.0-1 |
0 |
0.00
|
ShinyÉPICo |
BioArchLinuxBot
|
2024-05-03 14:19 (UTC) |
r-shinyfeedback
|
0.4.0-4 |
0 |
0.00
|
Display User Feedback in Shiny Apps |
BioArchLinuxBot
|
2022-06-06 14:57 (UTC) |
r-shinyfiles
|
0.9.3-1 |
0 |
0.00
|
A Server-Side File System Viewer for Shiny |
BioArchLinuxBot
|
2022-08-20 05:31 (UTC) |
r-shinyheatmaply
|
0.2.0-3 |
0 |
0.00
|
Deploy 'heatmaply' using 'shiny' |
BioArchLinuxBot
|
2022-06-06 14:57 (UTC) |
r-shinyhelper
|
0.3.2-4 |
0 |
0.00
|
Easily Add Markdown Help Files to 'shiny' App Elements |
BioArchLinuxBot
|
2022-06-06 14:58 (UTC) |
r-shinyjqui
|
0.4.1-7 |
0 |
0.00
|
'jQuery UI' Interactions and Effects for Shiny |
BioArchLinuxBot
|
2022-11-26 14:24 (UTC) |
r-shinyjs
|
2.1.0-8 |
0 |
0.00
|
Easily Improve the User Experience of Your Shiny Apps in Seconds |
pekkarr
|
2024-04-25 19:46 (UTC) |
r-shinylogs
|
0.2.1-3 |
0 |
0.00
|
Record Everything that Happens in a 'Shiny' Application |
pekkarr
|
2024-04-25 19:59 (UTC) |
r-shinymanager
|
1.0.410-3 |
0 |
0.00
|
Authentication Management for 'Shiny' Applications |
pekkarr
|
2024-04-25 23:18 (UTC) |
r-shinymatrix
|
0.8.0-1 |
0 |
0.00
|
Shiny Matrix Input Field |
BioArchLinuxBot
|
2024-04-10 18:13 (UTC) |
r-shinymeta
|
0.2.0.3-3 |
0 |
0.00
|
Export Domain Logic from Shiny using Meta-Programming |
pekkarr
|
2024-04-30 12:03 (UTC) |
r-shinymethyl
|
1.40.0-1 |
0 |
0.00
|
Interactive visualization for Illumina methylation arrays |
BioArchLinuxBot
|
2024-05-03 14:15 (UTC) |
r-shinypanel
|
0.1.5-3 |
0 |
0.00
|
Shiny Control Panel |
BioArchLinuxBot
|
2022-06-06 15:00 (UTC) |
r-shinyscreenshot
|
0.2.1-3 |
0 |
0.00
|
Capture Screenshots of Entire Pages or Parts of Pages in 'Shiny' |
BioArchLinuxBot
|
2023-10-27 04:10 (UTC) |
r-shinystan
|
2.6.0-4 |
0 |
0.00
|
Interactive Visual and Numerical Diagnostics and Posterior Analysis for Bayesian Models |
BioArchLinuxBot
|
2022-06-06 15:01 (UTC) |
r-shinythemes
|
1.2.0-4 |
0 |
0.00
|
Themes for Shiny |
BioArchLinuxBot
|
2022-06-06 15:01 (UTC) |
r-shinytitle
|
0.1.0-3 |
0 |
0.00
|
Update Browser Window Title in 'shiny' Session |
pekkarr
|
2024-04-25 19:58 (UTC) |
r-shinytoastr
|
2.2.0-1 |
0 |
0.00
|
Notifications from 'Shiny' |
BioArchLinuxBot
|
2023-08-31 00:03 (UTC) |
r-shinytree
|
0.3.1-3 |
0 |
0.00
|
jsTree Bindings for Shiny |
BioArchLinuxBot
|
2023-10-27 04:15 (UTC) |
r-shinyvalidate
|
0.1.3-1 |
0 |
0.00
|
Input Validation for Shiny Apps |
BioArchLinuxBot
|
2023-10-04 18:04 (UTC) |
r-shinywidgets
|
0.8.6-1 |
0 |
0.00
|
Custom Inputs Widgets for Shiny |
BioArchLinuxBot
|
2024-04-25 19:48 (UTC) |
r-shortread
|
1.60.0-1 |
0 |
0.00
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FASTQ input and manipulation |
greyltc
|
2023-11-02 11:15 (UTC) |
r-showtext
|
0.9.7-1 |
1 |
0.00
|
Using Fonts More Easily in R Graphs |
AlexBocken
|
2024-04-19 08:14 (UTC) |
r-showtextdb
|
3.0-2 |
1 |
0.00
|
Font Files for the 'showtext' Package |
AlexBocken
|
2023-08-03 08:46 (UTC) |
r-siamcat
|
2.8.0-1 |
0 |
0.00
|
Statistical Inference of Associations between Microbial Communities And host phenoTypes |
BioArchLinuxBot
|
2024-05-02 01:44 (UTC) |
r-sictools
|
1.34.0-1 |
0 |
0.00
|
Find SNV/Indel differences between two bam files with near relationship |
BioArchLinuxBot
|
2024-05-03 08:44 (UTC) |
r-sift.hsapiens.dbsnp137
|
1.0.0-3 |
0 |
0.00
|
PROVEAN/SIFT Predictions for Homo sapiens dbSNP build 137 |
BioArchLinuxBot
|
2022-06-06 15:03 (UTC) |
r-sigcheck
|
2.36.0-1 |
0 |
0.00
|
Check a gene signature's prognostic performance against random signatures, known signatures, and permuted data/metadata |
BioArchLinuxBot
|
2024-05-03 13:42 (UTC) |
r-sigclust
|
1.1.0.1-5 |
0 |
0.00
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Statistical Significance of Clustering |
BioArchLinuxBot
|
2024-04-24 22:03 (UTC) |
r-sigfeature
|
1.22.0-1 |
0 |
0.00
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sigFeature: Significant feature selection using SVM-RFE & t-statistic |
BioArchLinuxBot
|
2024-05-02 19:39 (UTC) |
r-sigfuge
|
1.42.0-1 |
0 |
0.00
|
SigFuge |
BioArchLinuxBot
|
2024-05-01 22:17 (UTC) |
r-siggenes
|
1.78.0-1 |
0 |
0.00
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Multiple Testing using SAM and Efron's Empirical Bayes Approaches |
BioArchLinuxBot
|
2024-05-01 18:39 (UTC) |
r-sights
|
1.30.0-1 |
0 |
0.00
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Statistics and dIagnostic Graphs for HTS |
BioArchLinuxBot
|
2024-05-01 23:26 (UTC) |
r-signac
|
1.13.0-1 |
0 |
0.00
|
Analysis of Single-Cell Chromatin Data |
pekkarr
|
2024-05-11 11:09 (UTC) |
r-signal
|
1.8.0-1 |
0 |
0.00
|
Signal Processing |
krant
|
2023-12-18 07:51 (UTC) |
r-signaturesearch
|
1.18.0-1 |
0 |
0.00
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Environment for Gene Expression Searching Combined with Functional Enrichment Analysis |
BioArchLinuxBot
|
2024-05-03 12:18 (UTC) |
r-signer
|
2.6.0-1 |
0 |
0.00
|
Empirical Bayesian approach to mutational signature discovery |
BioArchLinuxBot
|
2024-05-03 04:37 (UTC) |
r-signifinder
|
1.6.0-1 |
0 |
0.00
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Collection and implementation of public transcriptional cancer signatures |
pekkarr
|
2024-05-09 18:22 (UTC) |
r-sigspack
|
1.18.0-1 |
0 |
0.00
|
Mutational Signature Estimation for Single Samples |
BioArchLinuxBot
|
2024-05-03 05:15 (UTC) |
r-sigsquared
|
1.36.0-1 |
0 |
0.00
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Gene signature generation for functionally validated signaling pathways |
BioArchLinuxBot
|
2024-05-02 12:37 (UTC) |
r-sim
|
1.74.0-1 |
0 |
0.00
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Integrated Analysis on two human genomic datasets |
BioArchLinuxBot
|
2024-05-02 02:39 (UTC) |
r-simat
|
1.36.0-1 |
0 |
0.00
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GC-SIM-MS data processing and alaysis tool |
BioArchLinuxBot
|
2024-05-01 22:43 (UTC) |
r-simbindprofiles
|
1.40.0-1 |
0 |
0.00
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Similar Binding Profiles |
BioArchLinuxBot
|
2023-10-26 07:47 (UTC) |
r-simd
|
1.22.0-1 |
0 |
0.00
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Statistical Inferences with MeDIP-seq Data (SIMD) to infer the methylation level for each CpG site |
BioArchLinuxBot
|
2024-05-01 23:03 (UTC) |
r-simffpe
|
1.16.0-1 |
0 |
0.00
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NGS Read Simulator for FFPE Tissue |
BioArchLinuxBot
|
2024-05-02 00:36 (UTC) |
r-similarpeak
|
1.36.0-1 |
0 |
0.00
|
Metrics to estimate a level of similarity between two ChIP-Seq profiles |
BioArchLinuxBot
|
2024-05-02 04:27 (UTC) |
r-simlr
|
1.30.0-1 |
0 |
0.00
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Single-cell Interpretation via Multi-kernel LeaRning (SIMLR) |
BioArchLinuxBot
|
2024-05-01 19:06 (UTC) |
r-simona
|
1.2.0-1 |
0 |
0.00
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Semantic Similarity in Bio-Ontologies |
pekkarr
|
2024-05-02 21:06 (UTC) |
r-simpintlists
|
1.40.0-1 |
0 |
0.00
|
The package contains BioGRID interactions for various organisms in a simple format |
BioArchLinuxBot
|
2024-05-04 00:37 (UTC) |
r-simplecache
|
0.4.2-8 |
0 |
0.00
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Simply Caching R Objects |
BioArchLinuxBot
|
2024-04-24 21:48 (UTC) |
r-simpleitk
|
2.3.1-1 |
1 |
0.00
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A simplified layer built on top of ITK |
m-pilia
|
2023-12-23 10:55 (UTC) |
r-simpleseg
|
1.4.1-2 |
0 |
0.00
|
A package to perform simple cell segmentation |
pekkarr
|
2024-04-28 17:50 (UTC) |
r-simplifyenrichment
|
1.14.0-1 |
0 |
0.00
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Simplify Functional Enrichment Results |
BioArchLinuxBot
|
2024-05-02 23:22 (UTC) |
r-sincell
|
1.36.0-1 |
0 |
0.00
|
R package for the statistical assessment of cell state hierarchies from single-cell RNA-seq data |
BioArchLinuxBot
|
2024-05-01 21:24 (UTC) |
r-single
|
1.7.0-1 |
0 |
0.00
|
Accurate consensus sequence from nanopore reads of a gene library |
pekkarr
|
2024-05-02 23:50 (UTC) |
r-singlecellexperiment
|
1.26.0-1 |
0 |
0.00
|
S4 Classes for Single Cell Data |
BioArchLinuxBot
|
2024-05-02 19:00 (UTC) |
r-singlecellsignalr
|
1.16.0-1 |
0 |
0.00
|
Cell Signalling Using Single Cell RNAseq Data Analysis |
BioArchLinuxBot
|
2024-05-03 01:37 (UTC) |
r-singlecelltk
|
2.14.0-1 |
0 |
0.00
|
Comprehensive and Interactive Analysis of Single Cell RNA-Seq Data |
BioArchLinuxBot
|
2024-05-04 18:42 (UTC) |
r-singlemoleculefootprinting
|
1.12.0-1 |
0 |
0.00
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Analysis tools for Single Molecule Footprinting (SMF) data |
BioArchLinuxBot
|
2024-05-04 01:10 (UTC) |
r-singler
|
2.6.0-1 |
0 |
0.00
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Reference-Based Single-Cell RNA-Seq Annotation |
BioArchLinuxBot
|
2024-05-02 19:56 (UTC) |
r-singscore
|
1.24.0-1 |
0 |
0.00
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Rank-based single-sample gene set scoring method |
BioArchLinuxBot
|
2024-05-03 12:19 (UTC) |
r-sipsic
|
1.4.0-1 |
0 |
0.00
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Calculate Pathway Scores for Each Cell in scRNA-Seq Data |
pekkarr
|
2024-05-02 21:50 (UTC) |
r-sispa
|
1.30.0-2 |
0 |
0.00
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Method for Sample Integrated Set Profile Analysis |
BioArchLinuxBot
|
2024-02-13 18:03 (UTC) |
r-sitadela
|
1.12.0-1 |
0 |
0.00
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An R package for the easy provision of simple but complete tab-delimited genomic annotation from a variety of sources and organisms |
BioArchLinuxBot
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2024-05-05 12:03 (UTC) |
r-sitepath
|
1.20.0-1 |
0 |
0.00
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Phylogenetic pathway–dependent recognition of fixed substitutions and parallel mutations |
BioArchLinuxBot
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2024-05-02 01:07 (UTC) |
r-sitmo
|
2.0.2-4 |
0 |
0.00
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Parallel Pseudo Random Number Generator (PPRNG) 'sitmo' Header Files |
BioArchLinuxBot
|
2022-06-06 15:17 (UTC) |
r-sizepower
|
1.74.0-1 |
0 |
0.00
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Sample Size and Power Calculation in Micorarray Studies |
BioArchLinuxBot
|
2024-05-02 03:15 (UTC) |
r-sjlabelled
|
1.2.0-3 |
0 |
0.00
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Labelled Data Utility Functions |
BioArchLinuxBot
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2022-06-06 15:18 (UTC) |
r-sjmisc
|
2.8.10-1 |
0 |
0.00
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Data and Variable Transformation Functions |
BioArchLinuxBot
|
2024-05-13 18:19 (UTC) |
r-skewhyperbolic
|
0.4.2-1 |
1 |
0.08
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The Skew Hyperbolic Student t-Distribution |
BioArchLinuxBot
|
2023-11-26 06:58 (UTC) |
r-skewr
|
1.36.0-1 |
0 |
0.00
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Visualize Intensities Produced by Illumina's Human Methylation 450k BeadChip |
BioArchLinuxBot
|
2024-05-03 15:25 (UTC) |
r-skmeans
|
0.2.16-2 |
0 |
0.00
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Spherical k-Means Clustering |
BioArchLinuxBot
|
2024-04-11 18:14 (UTC) |
r-slalom
|
1.26.0-1 |
0 |
0.00
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Factorial Latent Variable Modeling of Single-Cell RNA-Seq Data |
BioArchLinuxBot
|
2024-05-03 12:22 (UTC) |
r-slam
|
0.1.50-13 |
2 |
0.00
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Sparse Lightweight Arrays and Matrices |
BioArchLinuxBot
|
2024-04-24 19:06 (UTC) |
r-slgi
|
1.56.0-4 |
0 |
0.00
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Synthetic Lethal Genetic Interaction |
BioArchLinuxBot
|
2022-11-04 06:38 (UTC) |
r-slider
|
0.3.1-1 |
0 |
0.00
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Sliding Window Functions |
BioArchLinuxBot
|
2023-10-12 18:03 (UTC) |
r-slingshot
|
2.12.0-1 |
0 |
0.00
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Tools for ordering single-cell sequencing |
BioArchLinuxBot
|
2024-05-03 00:14 (UTC) |
r-slinky
|
1.12.0-5 |
0 |
0.00
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Putting the fun in LINCS L1000 data analysis |
BioArchLinuxBot
|
2022-06-08 06:03 (UTC) |
r-slqpcr
|
1.70.0-1 |
0 |
0.00
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Functions for analysis of real-time quantitative PCR data at SIRS-Lab GmbH |
BioArchLinuxBot
|
2024-05-02 03:34 (UTC) |
r-sm
|
2.2.6.0-1 |
0 |
0.00
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Smoothing Methods for Nonparametric Regression and Density Estimation |
BioArchLinuxBot
|
2024-02-17 18:01 (UTC) |
r-smacof
|
2.1.6-1 |
0 |
0.00
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Multidimensional Scaling |
BioArchLinuxBot
|
2024-03-01 18:03 (UTC) |
r-smad
|
1.20.0-1 |
0 |
0.00
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Statistical Modelling of AP-MS Data (SMAD) |
BioArchLinuxBot
|
2024-05-01 20:11 (UTC) |
r-smap
|
1.66.0-2 |
0 |
0.00
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A Segmental Maximum A Posteriori Approach to Array-CGH Copy Number Profiling |
BioArchLinuxBot
|
2024-04-05 18:07 (UTC) |
r-smartsva
|
0.1.3-3 |
0 |
0.00
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Fast and Robust Surrogate Variable Analysis |
BioArchLinuxBot
|
2022-06-06 15:25 (UTC) |
r-smatr
|
3.4.8-9 |
0 |
0.00
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(Standardised) Major Axis Estimation and Testing Routines |
BioArchLinuxBot
|
2024-03-12 18:14 (UTC) |
r-smite
|
1.30.0-1 |
0 |
0.00
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Significance-based Modules Integrating the Transcriptome and Epigenome |
BioArchLinuxBot
|
2023-10-28 13:02 (UTC) |
r-smoother
|
1.3-1 |
0 |
0.00
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Functions Relating to the Smoothing of Numerical Data |
BioArchLinuxBot
|
2024-04-03 06:03 (UTC) |
r-smoothie
|
1.0.3-7 |
0 |
0.00
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Two-Dimensional Field Smoothing |
BioArchLinuxBot
|
2024-03-15 14:14 (UTC) |
r-smoothwin
|
3.0.0-3 |
0 |
0.00
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Soft Windowing on Linear Regression |
BioArchLinuxBot
|
2022-06-06 15:27 (UTC) |
r-smurf
|
1.1.5-3 |
0 |
0.00
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Sparse Multi-Type Regularized Feature Modeling |
BioArchLinuxBot
|
2023-03-25 06:02 (UTC) |
r-smvar
|
1.3.4-8 |
0 |
0.00
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Structural Model for Variances |
BioArchLinuxBot
|
2024-03-10 04:58 (UTC) |
r-sn
|
2.1.1-1 |
0 |
0.00
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The Skew-Normal and Related Distributions Such as the Skew-t and the SUN |
BioArchLinuxBot
|
2023-04-05 00:01 (UTC) |
r-sna
|
2.7.2-1 |
1 |
0.00
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Tools for Social Network Analysis |
BioArchLinuxBot
|
2023-12-06 06:03 (UTC) |
r-snagee
|
1.44.0-1 |
0 |
0.00
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Signal-to-Noise applied to Gene Expression Experiments |
BioArchLinuxBot
|
2024-05-02 05:14 (UTC) |
r-snageedata
|
1.40.0-1 |
0 |
0.00
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SNAGEE data |
BioArchLinuxBot
|
2024-05-04 00:10 (UTC) |
r-snakecase
|
0.11.1-1 |
0 |
0.00
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Convert Strings into any Case |
BioArchLinuxBot
|
2023-08-28 00:01 (UTC) |
r-snapcgh
|
1.72.0-1 |
0 |
0.00
|
Segmentation, normalisation and processing of aCGH data |
BioArchLinuxBot
|
2023-10-26 07:48 (UTC) |
r-snapcount
|
1.16.0-1 |
0 |
0.00
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R/Bioconductor Package for interfacing with Snaptron for rapid querying of expression counts |
BioArchLinuxBot
|
2024-05-02 19:47 (UTC) |
r-snifter
|
1.14.0-1 |
0 |
0.00
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R wrapper for the python openTSNE library |
BioArchLinuxBot
|
2024-05-02 00:54 (UTC) |
r-snm
|
1.52.0-1 |
0 |
0.00
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Supervised Normalization of Microarrays |
BioArchLinuxBot
|
2024-05-01 19:42 (UTC) |
r-snow
|
0.4.4-2 |
0 |
0.00
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Simple Network of Workstations |
greyltc
|
2023-03-21 13:52 (UTC) |
r-snowballc
|
0.7.1-3 |
1 |
0.00
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Snowball Stemmers Based on the C 'libstemmer' UTF-8 Library |
BioArchLinuxBot
|
2024-04-24 20:33 (UTC) |
r-snowfall
|
1.84.6.3-2 |
0 |
0.00
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Easier Cluster Computing (Based on 'snow') |
BioArchLinuxBot
|
2024-04-08 18:09 (UTC) |
r-snpediar
|
1.30.0-1 |
0 |
0.00
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Query data from SNPedia |
BioArchLinuxBot
|
2024-05-01 18:07 (UTC) |
r-snphood
|
1.34.0-1 |
0 |
0.00
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SNPhood: Investigate, quantify and visualise the epigenomic neighbourhood of SNPs using NGS data |
BioArchLinuxBot
|
2024-05-03 08:08 (UTC) |
r-snplocs.hsapiens.dbsnp144.grch37
|
0.99.20-4 |
0 |
0.00
|
SNP locations for Homo sapiens (dbSNP Build 144) |
BioArchLinuxBot
|
2022-06-06 15:35 (UTC) |
r-snplocs.hsapiens.dbsnp150.grch38
|
0.99.20-3 |
0 |
0.00
|
SNP locations for Homo sapiens (dbSNP Build 150) |
BioArchLinuxBot
|
2022-06-06 15:35 (UTC) |
r-snprelate
|
1.38.0-1 |
0 |
0.00
|
Parallel Computing Toolset for Relatedness and Principal Component Analysis of SNP Data |
BioArchLinuxBot
|
2024-05-01 18:53 (UTC) |
r-snpstats
|
1.54.0-1 |
0 |
0.00
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SnpMatrix and XSnpMatrix classes and methods |
BioArchLinuxBot
|
2024-05-02 05:09 (UTC) |
r-sodium
|
1.3.1-1 |
0 |
0.00
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A Modern and Easy-to-Use Crypto Library |
peippo
|
2023-11-21 15:46 (UTC) |
r-softimpute
|
1.4.1-9 |
0 |
0.00
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Matrix Completion via Iterative Soft-Thresholded SVD |
BioArchLinuxBot
|
2024-03-03 18:08 (UTC) |
r-soggi
|
1.36.0-1 |
0 |
0.00
|
Visualise ChIP-seq, MNase-seq and motif occurrence as aggregate plots Summarised Over Grouped Genomic Intervals |
BioArchLinuxBot
|
2024-05-03 03:41 (UTC) |
r-sojourner
|
1.11.0-4 |
0 |
0.00
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Statistical analysis of single molecule trajectories |
BioArchLinuxBot
|
2023-04-29 05:01 (UTC) |
r-som
|
0.3.5.1-10 |
0 |
0.00
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Self-Organizing Map |
BioArchLinuxBot
|
2024-04-24 19:50 (UTC) |
r-somaticsignatures
|
2.40.0-1 |
0 |
0.00
|
Somatic Signatures |
BioArchLinuxBot
|
2024-05-03 13:23 (UTC) |
r-sombrero
|
1.4.2-1 |
0 |
0.00
|
SOM Bound to Realize Euclidean and Relational Outputs |
BioArchLinuxBot
|
2024-01-26 00:06 (UTC) |
r-somnibus
|
1.12.0-1 |
0 |
0.00
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Smooth modeling of bisulfite sequencing |
BioArchLinuxBot
|
2024-05-03 05:31 (UTC) |
r-soniclength
|
1.4.7-9 |
0 |
0.00
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Estimating Abundance of Clones from DNA Fragmentation Data |
BioArchLinuxBot
|
2024-03-07 00:04 (UTC) |
r-sortable
|
0.5.0-3 |
0 |
0.00
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Drag-and-Drop in 'shiny' Apps with 'SortableJS' |
BioArchLinuxBot
|
2023-03-29 18:03 (UTC) |
r-soupx
|
1.6.2-1 |
0 |
0.00
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Single Cell mRNA Soup eXterminator |
BioArchLinuxBot
|
2022-11-01 18:05 (UTC) |
r-sourcetools
|
0.1.7.1-4 |
0 |
0.00
|
Tools for Reading, Tokenizing and Parsing R Code |
pekkarr
|
2024-04-25 07:05 (UTC) |
r-sp
|
2.1.4-1 |
2 |
0.00
|
Classes and Methods for Spatial Data |
pekkarr
|
2024-04-30 18:02 (UTC) |
r-spacepac
|
1.42.0-1 |
0 |
0.00
|
Identification of Mutational Clusters in 3D Protein Space via Simulation. |
BioArchLinuxBot
|
2024-05-03 18:25 (UTC) |
r-spacetime
|
1.3.1-1 |
0 |
0.00
|
Classes and Methods for Spatio-Temporal Data |
BioArchLinuxBot
|
2023-12-06 00:05 (UTC) |
r-spam
|
2.10.0-3 |
0 |
0.00
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SPArse Matrix |
BioArchLinuxBot
|
2024-04-25 07:07 (UTC) |
r-spamm
|
4.4.16-1 |
0 |
0.00
|
Mixed-Effect Models, with or without Spatial Random Effects |
pekkarr
|
2024-03-23 11:26 (UTC) |
r-spaniel
|
1.18.0-1 |
0 |
0.00
|
Spatial Transcriptomics Analysis |
BioArchLinuxBot
|
2024-05-03 08:41 (UTC) |
r-sparql
|
1.16-4 |
0 |
0.00
|
SPARQL client |
BioArchLinuxBot
|
2022-06-07 13:22 (UTC) |
r-sparrow
|
1.10.1-1 |
0 |
0.00
|
Take command of set enrichment analyses through a unified interface |
BioArchLinuxBot
|
2024-05-09 00:03 (UTC) |
r-sparsearray
|
1.4.5-1 |
0 |
0.00
|
High-performance sparse data representation and manipulation in R |
pekkarr
|
2024-05-22 18:05 (UTC) |
r-sparsedossa
|
1.24.0-2 |
0 |
0.00
|
Sparse Data Observations for Simulating Synthetic Abundance |
BioArchLinuxBot
|
2024-02-11 18:05 (UTC) |
r-sparseinv
|
0.1.3-4 |
0 |
0.00
|
Computation of the Sparse Inverse Subset |
BioArchLinuxBot
|
2022-06-06 15:45 (UTC) |
r-sparsem
|
1.81-11 |
1 |
0.00
|
Sparse Linear Algebra |
pekkarr
|
2024-04-24 18:29 (UTC) |
r-sparsematrixstats
|
1.16.0-1 |
0 |
0.00
|
Summary Statistics for Rows and Columns of Sparse Matrices |
BioArchLinuxBot
|
2024-05-01 18:28 (UTC) |
r-sparsemvn
|
0.2.2-4 |
0 |
0.00
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Multivariate Normal Functions for Sparse Covariance and Precision Matrices |
BioArchLinuxBot
|
2022-06-06 15:45 (UTC) |
r-sparsenetgls
|
1.22.0-1 |
0 |
0.00
|
Using Gaussian graphical structue learning estimation in generalized least squared regression for multivariate normal regression |
BioArchLinuxBot
|
2024-05-01 21:52 (UTC) |
r-sparsepca
|
0.1.2-7 |
0 |
0.00
|
Sparse Principal Component Analysis (SPCA) |
BioArchLinuxBot
|
2024-04-08 18:14 (UTC) |
r-sparsesignatures
|
2.14.0-1 |
0 |
0.00
|
SparseSignatures |
BioArchLinuxBot
|
2024-05-03 08:45 (UTC) |
r-sparsesvd
|
0.2.2-3 |
0 |
0.00
|
Sparse Truncated Singular Value Decomposition (from 'SVDLIBC') |
BioArchLinuxBot
|
2024-03-14 18:08 (UTC) |
r-spasim
|
1.6.0-1 |
0 |
0.00
|
Spatial point data simulator for tissue images |
pekkarr
|
2024-05-03 09:02 (UTC) |
r-spatest
|
3.1.2-7 |
0 |
0.00
|
Score Test and Meta-Analysis Based on Saddlepoint Approximation |
BioArchLinuxBot
|
2024-04-05 18:06 (UTC) |
r-spatialcpie
|
1.20.0-1 |
0 |
0.00
|
Cluster analysis of Spatial Transcriptomics data |
BioArchLinuxBot
|
2024-05-03 08:13 (UTC) |
r-spatialde
|
1.10.0-1 |
0 |
0.00
|
R wrapper for SpatialDE |
BioArchLinuxBot
|
2024-05-03 08:52 (UTC) |
r-spatialdecon
|
1.14.0-1 |
0 |
0.00
|
Deconvolution of mixed cells from spatial and/or bulk gene expression data |
BioArchLinuxBot
|
2024-05-03 08:38 (UTC) |
r-spatialexperiment
|
1.14.0-1 |
0 |
0.00
|
S4 Class for Spatial Experiments handling |
BioArchLinuxBot
|
2024-05-03 07:42 (UTC) |
r-spatialextremes
|
2.1.0-5 |
0 |
0.00
|
Modelling Spatial Extremes |
BioArchLinuxBot
|
2022-06-06 15:50 (UTC) |
r-spatialfeatureexperiment
|
1.6.1-1 |
0 |
0.00
|
Integrating SpatialExperiment with Simple Features in sf |
pekkarr
|
2024-05-19 00:13 (UTC) |
r-spatialheatmap
|
2.10.0-1 |
0 |
0.00
|
Creating spatial heatmaps from R and Shiny |
BioArchLinuxBot
|
2024-05-04 18:13 (UTC) |
r-spatiallibd
|
1.16.0-1 |
0 |
0.00
|
an R/Bioconductor package to visualize spatially-resolved transcriptomics data |
pekkarr
|
2024-05-04 18:11 (UTC) |
r-spatialtools
|
1.0.5-1 |
0 |
0.00
|
Tools for Spatial Data Analysis |
BioArchLinuxBot
|
2023-07-19 00:03 (UTC) |
r-spatstat
|
3.0.8-1 |
0 |
0.00
|
Spatial Point Pattern Analysis, Model-Fitting, Simulation, Tests |
BioArchLinuxBot
|
2024-03-26 18:08 (UTC) |
r-spatstat.core
|
2.4.4-6 |
0 |
0.00
|
Core Functionality of the 'spatstat' Family |
BioArchLinuxBot
|
2022-12-31 06:02 (UTC) |
r-spatstat.data
|
3.0.4-2 |
0 |
0.00
|
Datasets for 'spatstat' Family |
BioArchLinuxBot
|
2024-04-14 12:05 (UTC) |
r-spatstat.explore
|
3.2.7-1 |
0 |
0.00
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Exploratory Data Analysis for the 'spatstat' Family |
BioArchLinuxBot
|
2024-03-21 06:23 (UTC) |
r-spatstat.geom
|
3.2.9-1 |
0 |
0.00
|
Geometrical Functionality of the 'spatstat' Family |
BioArchLinuxBot
|
2024-02-28 12:01 (UTC) |
r-spatstat.linnet
|
3.1.5-1 |
0 |
0.00
|
Linear Networks Functionality of the 'spatstat' Family |
BioArchLinuxBot
|
2024-03-25 12:05 (UTC) |
r-spatstat.model
|
3.2.11-1 |
0 |
0.00
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Parametric Statistical Modelling for the 'spatstat' Family |
BioArchLinuxBot
|
2024-03-22 18:01 (UTC) |
r-spatstat.random
|
3.2.3-1 |
0 |
0.00
|
Random Generation Functionality for the 'spatstat' Family |
BioArchLinuxBot
|
2024-02-29 12:29 (UTC) |
r-spatstat.sparse
|
3.0.3-2 |
0 |
0.00
|
Sparse Three-Dimensional Arrays and Linear Algebra Utilities |
BioArchLinuxBot
|
2024-04-14 12:06 (UTC) |
r-spatstat.utils
|
3.0.4-2 |
0 |
0.00
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Utility Functions for 'spatstat' |
BioArchLinuxBot
|
2024-03-16 12:01 (UTC) |
r-spatzie
|
1.10.0-1 |
0 |
0.00
|
Identification of enriched motif pairs from chromatin interaction data |
BioArchLinuxBot
|
2024-05-03 19:19 (UTC) |
r-spbayes
|
0.4.7-1 |
0 |
0.00
|
Univariate and Multivariate Spatial-Temporal Modeling |
BioArchLinuxBot
|
2023-12-12 00:04 (UTC) |
r-spd
|
2.0.1-3 |
1 |
0.08
|
Semi Parametric Distribution |
BioArchLinuxBot
|
2024-03-15 14:16 (UTC) |
r-spdata
|
2.3.0-3 |
0 |
0.00
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Datasets for Spatial Analysis |
pekkarr
|
2024-04-25 00:25 (UTC) |
r-spdep
|
1.3.3-1 |
0 |
0.00
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Spatial Dependence: Weighting Schemes, Statistics |
pekkarr
|
2024-02-07 18:05 (UTC) |
r-spdl
|
0.0.5-1 |
0 |
0.00
|
Wrapper for 'RcppSpdlog' Functions |
BioArchLinuxBot
|
2023-06-18 18:04 (UTC) |
r-speaq
|
2.7.0-6 |
1 |
0.00
|
Tools for Nuclear Magnetic Resonance (NMR) Spectra Alignment, Peak Based Processing, Quantitative Analysis and Visualizations |
BioArchLinuxBot
|
2022-11-26 15:40 (UTC) |
r-speckle
|
1.4.0-1 |
0 |
0.00
|
Statistical methods for analysing single cell RNA-seq data |
pekkarr
|
2024-05-11 12:18 (UTC) |
r-specl
|
1.38.0-1 |
0 |
0.00
|
specL - Prepare Peptide Spectrum Matches for Use in Targeted Proteomics |
BioArchLinuxBot
|
2024-05-01 20:04 (UTC) |
r-specond
|
1.58.0-1 |
0 |
0.00
|
Condition specific detection from expression data |
BioArchLinuxBot
|
2024-05-01 19:44 (UTC) |
r-spectra
|
1.14.1-1 |
0 |
0.00
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Spectra Infrastructure for Mass Spectrometry Data |
BioArchLinuxBot
|
2024-05-18 00:01 (UTC) |
r-spectraltad
|
1.20.0-1 |
0 |
0.00
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SpectralTAD: Hierarchical TAD detection using spectral clustering |
BioArchLinuxBot
|
2024-05-03 07:49 (UTC) |
r-speedglm
|
0.3.5-3 |
0 |
0.00
|
Fitting Linear and Generalized Linear Models to Large Data Sets |
BioArchLinuxBot
|
2024-04-25 09:34 (UTC) |
r-spelling
|
2.3.0-1 |
0 |
0.00
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Tools for Spell Checking in R |
pekkarr
|
2024-03-05 06:01 (UTC) |
r-spem
|
1.44.0-1 |
0 |
0.00
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S-system parameter estimation method |
BioArchLinuxBot
|
2024-05-01 18:37 (UTC) |
r-spia
|
2.56.0-1 |
0 |
0.00
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Signaling Pathway Impact Analysis (SPIA) using combined evidence of pathway over-representation and unusual signaling perturbations |
BioArchLinuxBot
|
2024-05-03 07:02 (UTC) |
r-spiat
|
1.6.0-1 |
0 |
0.00
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Spatial Image Analysis of Tissues |
pekkarr
|
2024-05-03 09:12 (UTC) |
r-spicyr
|
1.16.0-1 |
0 |
0.00
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Spatial analysis of in situ cytometry data |
BioArchLinuxBot
|
2024-05-03 13:43 (UTC) |
r-spidermir
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1.32.0-1 |
0 |
0.00
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SpidermiR: An R/Bioconductor package for integrative network analysis with miRNA data |
BioArchLinuxBot
|
2023-10-26 05:01 (UTC) |
r-spikeli
|
2.64.0-1 |
0 |
0.00
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Affymetrix Spike-in Langmuir Isotherm Data Analysis Tool |
BioArchLinuxBot
|
2024-05-02 03:18 (UTC) |
r-spiky
|
1.10.0-1 |
0 |
0.00
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Spike-in calibration for cell-free MeDIP |
BioArchLinuxBot
|
2024-05-03 08:19 (UTC) |
r-spktools
|
1.60.0-1 |
0 |
0.00
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Methods for Spike-in Arrays |
BioArchLinuxBot
|
2024-05-02 12:44 (UTC) |
r-splancs
|
2.01.44-2 |
0 |
0.00
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Spatial and Space-Time Point Pattern Analysis |
BioArchLinuxBot
|
2024-04-08 18:06 (UTC) |
r-splatter
|
1.28.0-1 |
0 |
0.00
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Simple Simulation of Single-cell RNA Sequencing Data |
BioArchLinuxBot
|
2024-05-03 07:48 (UTC) |
r-splicewiz
|
1.6.0-1 |
0 |
0.00
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interactive analysis and visualization of alternative splicing in R |
pekkarr
|
2024-05-04 18:20 (UTC) |
r-splicingfactory
|
1.12.0-1 |
0 |
0.00
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Splicing Diversity Analysis for Transcriptome Data |
BioArchLinuxBot
|
2024-05-03 07:35 (UTC) |
r-splicinggraphs
|
1.44.0-1 |
0 |
0.00
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Create, manipulate, visualize splicing graphs, and assign RNA-seq reads to them |
BioArchLinuxBot
|
2024-05-03 08:14 (UTC) |
r-splines2
|
0.5.2-1 |
0 |
0.00
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Regression Spline Functions and Classes |
BioArchLinuxBot
|
2024-05-09 18:18 (UTC) |
r-splinetimer
|
1.32.0-1 |
0 |
0.00
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Time-course differential gene expression data analysis using spline regression models followed by gene association network reconstruction |
BioArchLinuxBot
|
2024-05-03 12:28 (UTC) |
r-splinter
|
1.30.0-1 |
0 |
0.00
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Splice Interpreter of Transcripts |
BioArchLinuxBot
|
2024-05-04 18:06 (UTC) |