92030 packages found. Page 276 of 369.

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Name Version Votes Popularity? Description Maintainer Last Updated
r-seq2pathway 1.36.0-1 0 0.00 a novel tool for functional gene-set (or termed as pathway) analysis of next-generation sequencing data BioArchLinuxBot 2024-05-02 23:16 (UTC)
r-seq2pathway.data 1.36.0-1 0 0.00 data set for R package seq2pathway BioArchLinuxBot 2024-05-04 00:14 (UTC)
r-seqarchr 1.8.0-1 0 0.00 Identify Different Architectures of Sequence Elements pekkarr 2024-05-02 18:36 (UTC)
r-seqarchrplus 1.4.0-1 0 0.00 Downstream analyses of promoter sequence architectures and HTML report generation pekkarr 2024-05-03 04:24 (UTC)
r-seqarray 1.44.0-1 0 0.00 Data management of large-scale whole-genome sequence variant calls BioArchLinuxBot 2024-05-02 00:09 (UTC)
r-seqbias 1.50.0-1 0 0.00 Estimation of per-position bias in high-throughput sequencing data BioArchLinuxBot 2023-10-26 02:57 (UTC)
r-seqcat 1.26.0-1 0 0.00 High Throughput Sequencing Cell Authentication Toolkit BioArchLinuxBot 2024-05-03 04:49 (UTC)
r-seqcna 1.48.0-1 0 0.00 Copy number analysis of high-throughput sequencing cancer data BioArchLinuxBot 2023-10-25 22:08 (UTC)
r-seqcna.annot 1.38.0-2 0 0.00 Annotation for the copy number analysis of deep sequencing cancer data with seqCNA BioArchLinuxBot 2024-03-15 14:10 (UTC)
r-seqcombo 1.26.0-1 0 0.00 Visualization Tool for Sequence Recombination and Reassortment BioArchLinuxBot 2024-05-01 21:30 (UTC)
r-seqgate 1.14.0-1 0 0.00 Filtering of Lowly Expressed Features BioArchLinuxBot 2024-05-02 19:32 (UTC)
r-seqgsea 1.44.0-1 0 0.00 Gene Set Enrichment Analysis (GSEA) of RNA-Seq Data: integrating differential expression and splicing BioArchLinuxBot 2024-05-02 23:07 (UTC)
r-seqinr 4.2.36-1 0 0.00 Biological Sequences Retrieval and Analysis BioArchLinuxBot 2023-12-08 18:03 (UTC)
r-seqlogo 1.70.0-1 0 0.00 Sequence logos for DNA sequence alignments BioArchLinuxBot 2024-05-02 03:17 (UTC)
r-seqmagick 0.1.7-2 0 0.00 Sequence Manipulation Utilities BioArchLinuxBot 2024-04-26 14:22 (UTC)
r-seqminer 9.4-1 0 0.00 Efficiently Read Sequence Data (VCF Format, BCF Format, METAL Format and BGEN Format) into R BioArchLinuxBot 2024-02-03 18:02 (UTC)
r-seqpattern 1.36.0-1 0 0.00 Visualising oligonucleotide patterns and motif occurrences across a set of sorted sequences BioArchLinuxBot 2024-05-02 00:07 (UTC)
r-seqsetvis 1.24.0-1 0 0.00 Set Based Visualizations for Next-Gen Sequencing Data BioArchLinuxBot 2024-05-03 01:06 (UTC)
r-seqsqc 1.26.0-1 0 0.00 A bioconductor package for sample quality check with next generation sequencing data BioArchLinuxBot 2024-05-02 20:42 (UTC)
r-seqtools 1.38.0-1 0 0.00 Analysis of nucleotide, sequence and quality content on fastq files BioArchLinuxBot 2024-05-02 05:10 (UTC)
r-seqvartools 1.42.0-1 0 0.00 Tools for variant data BioArchLinuxBot 2024-05-02 01:53 (UTC)
r-seriation 1.5.5-1 0 0.00 Infrastructure for Ordering Objects Using Seriation BioArchLinuxBot 2024-04-18 00:02 (UTC)
r-servr 0.30-1 0 0.00 A Simple HTTP Server to Serve Static Files or Dynamic Documents BioArchLinuxBot 2024-03-23 18:06 (UTC)
r-sesame 1.22.0-1 0 0.00 SEnsible Step-wise Analysis of DNA MEthylation BeadChips BioArchLinuxBot 2024-05-03 09:24 (UTC)
r-sesamedata 1.22.0-1 0 0.00 Supporting Data for SeSAMe Package BioArchLinuxBot 2024-05-03 08:24 (UTC)
r-sessioninfo 1.2.2-7 1 0.00 R Session Information BioArchLinuxBot 2022-10-18 12:34 (UTC)
r-setools 1.18.0-1 0 0.00 SEtools: tools for working with SummarizedExperiment BioArchLinuxBot 2024-05-03 13:51 (UTC)
r-setrng 2024.2.1-1 0 0.00 Set (Normal) Random Number Generator and Seed BioArchLinuxBot 2024-02-18 18:02 (UTC)
r-sets 1.0.25-2 0 0.00 Generalized Sets, Customizable Sets and Intervals BioArchLinuxBot 2024-03-14 18:13 (UTC)
r-settings 0.2.7-9 0 0.00 Software Option Settings Manager for R BioArchLinuxBot 2024-02-08 18:02 (UTC)
r-seurat 5.1.0-1 0 0.00 Tools for Single Cell Genomics BioArchLinuxBot 2024-05-11 12:16 (UTC)
r-seuratobject 5.0.2-1 0 0.00 Data Structures for Single Cell Data BioArchLinuxBot 2024-05-08 18:14 (UTC)
r-sevenbridges 1.34.0-1 0 0.00 Seven Bridges Platform API Client and Common Workflow Language Tool Builder in R BioArchLinuxBot 2024-05-01 20:02 (UTC)
r-sevenc 1.24.0-1 0 0.00 Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs BioArchLinuxBot 2024-05-03 01:14 (UTC)
r-sf 1.0.16-1 1 0.00 Simple Features for R peippo 2024-03-25 11:53 (UTC)
r-sfarrow 0.4.1-3 0 0.00 Read/Write Simple Feature Objects ('sf') with 'Apache' 'Arrow' pekkarr 2024-04-25 13:02 (UTC)
r-sfedata 1.6.0-1 0 0.00 Example SpatialFeatureExperiment datasets pekkarr 2024-05-04 18:25 (UTC)
r-sfheaders 0.4.4-1 0 0.00 Converts Between R Objects and Simple Feature Objects peippo 2024-01-18 12:00 (UTC)
r-sfsmisc 1.1.18-1 0 0.00 Utilities from 'Seminar fuer Statistik' ETH Zurich pekkarr 2024-04-25 18:09 (UTC)
r-sftime 0.2.0-1 0 0.00 Classes and Methods for Simple Feature Objects that Have a Time Column BioArchLinuxBot 2022-10-20 18:01 (UTC)
r-sgcp 1.2.0-4 0 0.00 A semi-supervised pipeline for gene clustering using self-training approach in gene co-expression networks pekkarr 2024-04-28 20:21 (UTC)
r-sgeostat 1.0.27-8 0 0.00 An Object-Oriented Framework for Geostatistical Modeling in S+ BioArchLinuxBot 2024-04-24 22:15 (UTC)
r-sgseq 1.38.0-1 0 0.00 Splice event prediction and quantification from RNA-seq data BioArchLinuxBot 2024-05-03 02:29 (UTC)
r-sgt 2.0-5 0 0.00 Skewed Generalized T Distribution Tree BioArchLinuxBot 2022-06-06 14:50 (UTC)
r-sha3sum 1.2.2-1 0 0.00 sha3 cli (build using Rust): Print or check SHA3 digests. Commands and options are similar to the GNU Linux command shaXXXsum. kurdy 2023-02-11 00:55 (UTC)
r-shades 1.4.0-9 0 0.00 Simple Colour Manipulation BioArchLinuxBot 2024-03-01 06:03 (UTC)
r-shadowtext 0.1.3-1 0 0.00 Shadow Text Grob and Layer BioArchLinuxBot 2024-01-19 06:02 (UTC)
r-shape 1.4.6.1-1 1 0.00 Functions for Plotting Graphical Shapes, Colors BioArchLinuxBot 2024-02-23 20:06 (UTC)
r-sharedobject 1.18.0-1 0 0.00 Sharing R objects across multiple R processes without memory duplication BioArchLinuxBot 2024-05-02 05:05 (UTC)
r-shiny 1.8.1.1-1 0 0.00 Web Application Framework for R BioArchLinuxBot 2024-04-02 18:25 (UTC)
r-shinyace 0.4.2-1 0 0.00 Ace Editor Bindings for Shiny BioArchLinuxBot 2022-06-06 14:52 (UTC)
r-shinyalert 3.1.0-1 0 0.00 Easily Create Pretty Popup Messages (Modals) in 'Shiny' BioArchLinuxBot 2024-04-28 00:06 (UTC)
r-shinybs 0.61.1-5 0 0.00 Twitter Bootstrap Components for Shiny BioArchLinuxBot 2022-06-06 14:54 (UTC)
r-shinybusy 0.3.3-1 0 0.00 Busy Indicator for 'Shiny' Applications BioArchLinuxBot 2024-03-10 05:11 (UTC)
r-shinycssloaders 1.0.0-4 0 0.00 Add Loading Animations to a 'shiny' Output While It's Recalculating BioArchLinuxBot 2022-06-06 14:54 (UTC)
r-shinycustomloader 0.9.0-4 0 0.00 Custom Loader for Shiny Outputs BioArchLinuxBot 2022-06-06 14:55 (UTC)
r-shinycyjs 1.0.0-1 0 0.00 Create Interactive Network Visualizations in R and 'shiny' pekkarr 2024-04-12 15:06 (UTC)
r-shinydashboard 0.7.2-4 0 0.00 Create Dashboards with 'Shiny' BioArchLinuxBot 2022-06-06 14:55 (UTC)
r-shinydashboardplus 2.0.4-1 0 0.00 Add More 'AdminLTE2' Components to 'shinydashboard' BioArchLinuxBot 2024-04-10 00:03 (UTC)
r-shinydisconnect 0.1.1-1 0 0.00 Show a Nice Message When a 'Shiny' App Disconnects or Errors BioArchLinuxBot 2023-08-21 12:05 (UTC)
r-shinyepico 1.12.0-1 0 0.00 ShinyÉPICo BioArchLinuxBot 2024-05-03 14:19 (UTC)
r-shinyfeedback 0.4.0-4 0 0.00 Display User Feedback in Shiny Apps BioArchLinuxBot 2022-06-06 14:57 (UTC)
r-shinyfiles 0.9.3-1 0 0.00 A Server-Side File System Viewer for Shiny BioArchLinuxBot 2022-08-20 05:31 (UTC)
r-shinyheatmaply 0.2.0-3 0 0.00 Deploy 'heatmaply' using 'shiny' BioArchLinuxBot 2022-06-06 14:57 (UTC)
r-shinyhelper 0.3.2-4 0 0.00 Easily Add Markdown Help Files to 'shiny' App Elements BioArchLinuxBot 2022-06-06 14:58 (UTC)
r-shinyjqui 0.4.1-7 0 0.00 'jQuery UI' Interactions and Effects for Shiny BioArchLinuxBot 2022-11-26 14:24 (UTC)
r-shinyjs 2.1.0-8 0 0.00 Easily Improve the User Experience of Your Shiny Apps in Seconds pekkarr 2024-04-25 19:46 (UTC)
r-shinylogs 0.2.1-3 0 0.00 Record Everything that Happens in a 'Shiny' Application pekkarr 2024-04-25 19:59 (UTC)
r-shinymanager 1.0.410-3 0 0.00 Authentication Management for 'Shiny' Applications pekkarr 2024-04-25 23:18 (UTC)
r-shinymatrix 0.8.0-1 0 0.00 Shiny Matrix Input Field BioArchLinuxBot 2024-04-10 18:13 (UTC)
r-shinymeta 0.2.0.3-3 0 0.00 Export Domain Logic from Shiny using Meta-Programming pekkarr 2024-04-30 12:03 (UTC)
r-shinymethyl 1.40.0-1 0 0.00 Interactive visualization for Illumina methylation arrays BioArchLinuxBot 2024-05-03 14:15 (UTC)
r-shinypanel 0.1.5-3 0 0.00 Shiny Control Panel BioArchLinuxBot 2022-06-06 15:00 (UTC)
r-shinyscreenshot 0.2.1-3 0 0.00 Capture Screenshots of Entire Pages or Parts of Pages in 'Shiny' BioArchLinuxBot 2023-10-27 04:10 (UTC)
r-shinystan 2.6.0-4 0 0.00 Interactive Visual and Numerical Diagnostics and Posterior Analysis for Bayesian Models BioArchLinuxBot 2022-06-06 15:01 (UTC)
r-shinythemes 1.2.0-4 0 0.00 Themes for Shiny BioArchLinuxBot 2022-06-06 15:01 (UTC)
r-shinytitle 0.1.0-3 0 0.00 Update Browser Window Title in 'shiny' Session pekkarr 2024-04-25 19:58 (UTC)
r-shinytoastr 2.2.0-1 0 0.00 Notifications from 'Shiny' BioArchLinuxBot 2023-08-31 00:03 (UTC)
r-shinytree 0.3.1-3 0 0.00 jsTree Bindings for Shiny BioArchLinuxBot 2023-10-27 04:15 (UTC)
r-shinyvalidate 0.1.3-1 0 0.00 Input Validation for Shiny Apps BioArchLinuxBot 2023-10-04 18:04 (UTC)
r-shinywidgets 0.8.6-1 0 0.00 Custom Inputs Widgets for Shiny BioArchLinuxBot 2024-04-25 19:48 (UTC)
r-shortread 1.60.0-1 0 0.00 FASTQ input and manipulation greyltc 2023-11-02 11:15 (UTC)
r-showtext 0.9.7-1 1 0.00 Using Fonts More Easily in R Graphs AlexBocken 2024-04-19 08:14 (UTC)
r-showtextdb 3.0-2 1 0.00 Font Files for the 'showtext' Package AlexBocken 2023-08-03 08:46 (UTC)
r-siamcat 2.8.0-1 0 0.00 Statistical Inference of Associations between Microbial Communities And host phenoTypes BioArchLinuxBot 2024-05-02 01:44 (UTC)
r-sictools 1.34.0-1 0 0.00 Find SNV/Indel differences between two bam files with near relationship BioArchLinuxBot 2024-05-03 08:44 (UTC)
r-sift.hsapiens.dbsnp137 1.0.0-3 0 0.00 PROVEAN/SIFT Predictions for Homo sapiens dbSNP build 137 BioArchLinuxBot 2022-06-06 15:03 (UTC)
r-sigcheck 2.36.0-1 0 0.00 Check a gene signature's prognostic performance against random signatures, known signatures, and permuted data/metadata BioArchLinuxBot 2024-05-03 13:42 (UTC)
r-sigclust 1.1.0.1-5 0 0.00 Statistical Significance of Clustering BioArchLinuxBot 2024-04-24 22:03 (UTC)
r-sigfeature 1.22.0-1 0 0.00 sigFeature: Significant feature selection using SVM-RFE & t-statistic BioArchLinuxBot 2024-05-02 19:39 (UTC)
r-sigfuge 1.42.0-1 0 0.00 SigFuge BioArchLinuxBot 2024-05-01 22:17 (UTC)
r-siggenes 1.78.0-1 0 0.00 Multiple Testing using SAM and Efron's Empirical Bayes Approaches BioArchLinuxBot 2024-05-01 18:39 (UTC)
r-sights 1.30.0-1 0 0.00 Statistics and dIagnostic Graphs for HTS BioArchLinuxBot 2024-05-01 23:26 (UTC)
r-signac 1.13.0-1 0 0.00 Analysis of Single-Cell Chromatin Data pekkarr 2024-05-11 11:09 (UTC)
r-signal 1.8.0-1 0 0.00 Signal Processing krant 2023-12-18 07:51 (UTC)
r-signaturesearch 1.18.0-1 0 0.00 Environment for Gene Expression Searching Combined with Functional Enrichment Analysis BioArchLinuxBot 2024-05-03 12:18 (UTC)
r-signer 2.6.0-1 0 0.00 Empirical Bayesian approach to mutational signature discovery BioArchLinuxBot 2024-05-03 04:37 (UTC)
r-signifinder 1.6.0-1 0 0.00 Collection and implementation of public transcriptional cancer signatures pekkarr 2024-05-09 18:22 (UTC)
r-sigspack 1.18.0-1 0 0.00 Mutational Signature Estimation for Single Samples BioArchLinuxBot 2024-05-03 05:15 (UTC)
r-sigsquared 1.36.0-1 0 0.00 Gene signature generation for functionally validated signaling pathways BioArchLinuxBot 2024-05-02 12:37 (UTC)
r-sim 1.74.0-1 0 0.00 Integrated Analysis on two human genomic datasets BioArchLinuxBot 2024-05-02 02:39 (UTC)
r-simat 1.36.0-1 0 0.00 GC-SIM-MS data processing and alaysis tool BioArchLinuxBot 2024-05-01 22:43 (UTC)
r-simbindprofiles 1.40.0-1 0 0.00 Similar Binding Profiles BioArchLinuxBot 2023-10-26 07:47 (UTC)
r-simd 1.22.0-1 0 0.00 Statistical Inferences with MeDIP-seq Data (SIMD) to infer the methylation level for each CpG site BioArchLinuxBot 2024-05-01 23:03 (UTC)
r-simffpe 1.16.0-1 0 0.00 NGS Read Simulator for FFPE Tissue BioArchLinuxBot 2024-05-02 00:36 (UTC)
r-similarpeak 1.36.0-1 0 0.00 Metrics to estimate a level of similarity between two ChIP-Seq profiles BioArchLinuxBot 2024-05-02 04:27 (UTC)
r-simlr 1.30.0-1 0 0.00 Single-cell Interpretation via Multi-kernel LeaRning (SIMLR) BioArchLinuxBot 2024-05-01 19:06 (UTC)
r-simona 1.2.0-1 0 0.00 Semantic Similarity in Bio-Ontologies pekkarr 2024-05-02 21:06 (UTC)
r-simpintlists 1.40.0-1 0 0.00 The package contains BioGRID interactions for various organisms in a simple format BioArchLinuxBot 2024-05-04 00:37 (UTC)
r-simplecache 0.4.2-8 0 0.00 Simply Caching R Objects BioArchLinuxBot 2024-04-24 21:48 (UTC)
r-simpleitk 2.3.1-1 1 0.00 A simplified layer built on top of ITK m-pilia 2023-12-23 10:55 (UTC)
r-simpleseg 1.4.1-2 0 0.00 A package to perform simple cell segmentation pekkarr 2024-04-28 17:50 (UTC)
r-simplifyenrichment 1.14.0-1 0 0.00 Simplify Functional Enrichment Results BioArchLinuxBot 2024-05-02 23:22 (UTC)
r-sincell 1.36.0-1 0 0.00 R package for the statistical assessment of cell state hierarchies from single-cell RNA-seq data BioArchLinuxBot 2024-05-01 21:24 (UTC)
r-single 1.7.0-1 0 0.00 Accurate consensus sequence from nanopore reads of a gene library pekkarr 2024-05-02 23:50 (UTC)
r-singlecellexperiment 1.26.0-1 0 0.00 S4 Classes for Single Cell Data BioArchLinuxBot 2024-05-02 19:00 (UTC)
r-singlecellsignalr 1.16.0-1 0 0.00 Cell Signalling Using Single Cell RNAseq Data Analysis BioArchLinuxBot 2024-05-03 01:37 (UTC)
r-singlecelltk 2.14.0-1 0 0.00 Comprehensive and Interactive Analysis of Single Cell RNA-Seq Data BioArchLinuxBot 2024-05-04 18:42 (UTC)
r-singlemoleculefootprinting 1.12.0-1 0 0.00 Analysis tools for Single Molecule Footprinting (SMF) data BioArchLinuxBot 2024-05-04 01:10 (UTC)
r-singler 2.6.0-1 0 0.00 Reference-Based Single-Cell RNA-Seq Annotation BioArchLinuxBot 2024-05-02 19:56 (UTC)
r-singscore 1.24.0-1 0 0.00 Rank-based single-sample gene set scoring method BioArchLinuxBot 2024-05-03 12:19 (UTC)
r-sipsic 1.4.0-1 0 0.00 Calculate Pathway Scores for Each Cell in scRNA-Seq Data pekkarr 2024-05-02 21:50 (UTC)
r-sispa 1.30.0-2 0 0.00 Method for Sample Integrated Set Profile Analysis BioArchLinuxBot 2024-02-13 18:03 (UTC)
r-sitadela 1.12.0-1 0 0.00 An R package for the easy provision of simple but complete tab-delimited genomic annotation from a variety of sources and organisms BioArchLinuxBot 2024-05-05 12:03 (UTC)
r-sitepath 1.20.0-1 0 0.00 Phylogenetic pathway–dependent recognition of fixed substitutions and parallel mutations BioArchLinuxBot 2024-05-02 01:07 (UTC)
r-sitmo 2.0.2-4 0 0.00 Parallel Pseudo Random Number Generator (PPRNG) 'sitmo' Header Files BioArchLinuxBot 2022-06-06 15:17 (UTC)
r-sizepower 1.74.0-1 0 0.00 Sample Size and Power Calculation in Micorarray Studies BioArchLinuxBot 2024-05-02 03:15 (UTC)
r-sjlabelled 1.2.0-3 0 0.00 Labelled Data Utility Functions BioArchLinuxBot 2022-06-06 15:18 (UTC)
r-sjmisc 2.8.10-1 0 0.00 Data and Variable Transformation Functions BioArchLinuxBot 2024-05-13 18:19 (UTC)
r-skewhyperbolic 0.4.2-1 1 0.08 The Skew Hyperbolic Student t-Distribution BioArchLinuxBot 2023-11-26 06:58 (UTC)
r-skewr 1.36.0-1 0 0.00 Visualize Intensities Produced by Illumina's Human Methylation 450k BeadChip BioArchLinuxBot 2024-05-03 15:25 (UTC)
r-skmeans 0.2.16-2 0 0.00 Spherical k-Means Clustering BioArchLinuxBot 2024-04-11 18:14 (UTC)
r-slalom 1.26.0-1 0 0.00 Factorial Latent Variable Modeling of Single-Cell RNA-Seq Data BioArchLinuxBot 2024-05-03 12:22 (UTC)
r-slam 0.1.50-13 2 0.00 Sparse Lightweight Arrays and Matrices BioArchLinuxBot 2024-04-24 19:06 (UTC)
r-slgi 1.56.0-4 0 0.00 Synthetic Lethal Genetic Interaction BioArchLinuxBot 2022-11-04 06:38 (UTC)
r-slider 0.3.1-1 0 0.00 Sliding Window Functions BioArchLinuxBot 2023-10-12 18:03 (UTC)
r-slingshot 2.12.0-1 0 0.00 Tools for ordering single-cell sequencing BioArchLinuxBot 2024-05-03 00:14 (UTC)
r-slinky 1.12.0-5 0 0.00 Putting the fun in LINCS L1000 data analysis BioArchLinuxBot 2022-06-08 06:03 (UTC)
r-slqpcr 1.70.0-1 0 0.00 Functions for analysis of real-time quantitative PCR data at SIRS-Lab GmbH BioArchLinuxBot 2024-05-02 03:34 (UTC)
r-sm 2.2.6.0-1 0 0.00 Smoothing Methods for Nonparametric Regression and Density Estimation BioArchLinuxBot 2024-02-17 18:01 (UTC)
r-smacof 2.1.6-1 0 0.00 Multidimensional Scaling BioArchLinuxBot 2024-03-01 18:03 (UTC)
r-smad 1.20.0-1 0 0.00 Statistical Modelling of AP-MS Data (SMAD) BioArchLinuxBot 2024-05-01 20:11 (UTC)
r-smap 1.66.0-2 0 0.00 A Segmental Maximum A Posteriori Approach to Array-CGH Copy Number Profiling BioArchLinuxBot 2024-04-05 18:07 (UTC)
r-smartsva 0.1.3-3 0 0.00 Fast and Robust Surrogate Variable Analysis BioArchLinuxBot 2022-06-06 15:25 (UTC)
r-smatr 3.4.8-9 0 0.00 (Standardised) Major Axis Estimation and Testing Routines BioArchLinuxBot 2024-03-12 18:14 (UTC)
r-smite 1.30.0-1 0 0.00 Significance-based Modules Integrating the Transcriptome and Epigenome BioArchLinuxBot 2023-10-28 13:02 (UTC)
r-smoother 1.3-1 0 0.00 Functions Relating to the Smoothing of Numerical Data BioArchLinuxBot 2024-04-03 06:03 (UTC)
r-smoothie 1.0.3-7 0 0.00 Two-Dimensional Field Smoothing BioArchLinuxBot 2024-03-15 14:14 (UTC)
r-smoothwin 3.0.0-3 0 0.00 Soft Windowing on Linear Regression BioArchLinuxBot 2022-06-06 15:27 (UTC)
r-smurf 1.1.5-3 0 0.00 Sparse Multi-Type Regularized Feature Modeling BioArchLinuxBot 2023-03-25 06:02 (UTC)
r-smvar 1.3.4-8 0 0.00 Structural Model for Variances BioArchLinuxBot 2024-03-10 04:58 (UTC)
r-sn 2.1.1-1 0 0.00 The Skew-Normal and Related Distributions Such as the Skew-t and the SUN BioArchLinuxBot 2023-04-05 00:01 (UTC)
r-sna 2.7.2-1 1 0.00 Tools for Social Network Analysis BioArchLinuxBot 2023-12-06 06:03 (UTC)
r-snagee 1.44.0-1 0 0.00 Signal-to-Noise applied to Gene Expression Experiments BioArchLinuxBot 2024-05-02 05:14 (UTC)
r-snageedata 1.40.0-1 0 0.00 SNAGEE data BioArchLinuxBot 2024-05-04 00:10 (UTC)
r-snakecase 0.11.1-1 0 0.00 Convert Strings into any Case BioArchLinuxBot 2023-08-28 00:01 (UTC)
r-snapcgh 1.72.0-1 0 0.00 Segmentation, normalisation and processing of aCGH data BioArchLinuxBot 2023-10-26 07:48 (UTC)
r-snapcount 1.16.0-1 0 0.00 R/Bioconductor Package for interfacing with Snaptron for rapid querying of expression counts BioArchLinuxBot 2024-05-02 19:47 (UTC)
r-snifter 1.14.0-1 0 0.00 R wrapper for the python openTSNE library BioArchLinuxBot 2024-05-02 00:54 (UTC)
r-snm 1.52.0-1 0 0.00 Supervised Normalization of Microarrays BioArchLinuxBot 2024-05-01 19:42 (UTC)
r-snow 0.4.4-2 0 0.00 Simple Network of Workstations greyltc 2023-03-21 13:52 (UTC)
r-snowballc 0.7.1-3 1 0.00 Snowball Stemmers Based on the C 'libstemmer' UTF-8 Library BioArchLinuxBot 2024-04-24 20:33 (UTC)
r-snowfall 1.84.6.3-2 0 0.00 Easier Cluster Computing (Based on 'snow') BioArchLinuxBot 2024-04-08 18:09 (UTC)
r-snpediar 1.30.0-1 0 0.00 Query data from SNPedia BioArchLinuxBot 2024-05-01 18:07 (UTC)
r-snphood 1.34.0-1 0 0.00 SNPhood: Investigate, quantify and visualise the epigenomic neighbourhood of SNPs using NGS data BioArchLinuxBot 2024-05-03 08:08 (UTC)
r-snplocs.hsapiens.dbsnp144.grch37 0.99.20-4 0 0.00 SNP locations for Homo sapiens (dbSNP Build 144) BioArchLinuxBot 2022-06-06 15:35 (UTC)
r-snplocs.hsapiens.dbsnp150.grch38 0.99.20-3 0 0.00 SNP locations for Homo sapiens (dbSNP Build 150) BioArchLinuxBot 2022-06-06 15:35 (UTC)
r-snprelate 1.38.0-1 0 0.00 Parallel Computing Toolset for Relatedness and Principal Component Analysis of SNP Data BioArchLinuxBot 2024-05-01 18:53 (UTC)
r-snpstats 1.54.0-1 0 0.00 SnpMatrix and XSnpMatrix classes and methods BioArchLinuxBot 2024-05-02 05:09 (UTC)
r-sodium 1.3.1-1 0 0.00 A Modern and Easy-to-Use Crypto Library peippo 2023-11-21 15:46 (UTC)
r-softimpute 1.4.1-9 0 0.00 Matrix Completion via Iterative Soft-Thresholded SVD BioArchLinuxBot 2024-03-03 18:08 (UTC)
r-soggi 1.36.0-1 0 0.00 Visualise ChIP-seq, MNase-seq and motif occurrence as aggregate plots Summarised Over Grouped Genomic Intervals BioArchLinuxBot 2024-05-03 03:41 (UTC)
r-sojourner 1.11.0-4 0 0.00 Statistical analysis of single molecule trajectories BioArchLinuxBot 2023-04-29 05:01 (UTC)
r-som 0.3.5.1-10 0 0.00 Self-Organizing Map BioArchLinuxBot 2024-04-24 19:50 (UTC)
r-somaticsignatures 2.40.0-1 0 0.00 Somatic Signatures BioArchLinuxBot 2024-05-03 13:23 (UTC)
r-sombrero 1.4.2-1 0 0.00 SOM Bound to Realize Euclidean and Relational Outputs BioArchLinuxBot 2024-01-26 00:06 (UTC)
r-somnibus 1.12.0-1 0 0.00 Smooth modeling of bisulfite sequencing BioArchLinuxBot 2024-05-03 05:31 (UTC)
r-soniclength 1.4.7-9 0 0.00 Estimating Abundance of Clones from DNA Fragmentation Data BioArchLinuxBot 2024-03-07 00:04 (UTC)
r-sortable 0.5.0-3 0 0.00 Drag-and-Drop in 'shiny' Apps with 'SortableJS' BioArchLinuxBot 2023-03-29 18:03 (UTC)
r-soupx 1.6.2-1 0 0.00 Single Cell mRNA Soup eXterminator BioArchLinuxBot 2022-11-01 18:05 (UTC)
r-sourcetools 0.1.7.1-4 0 0.00 Tools for Reading, Tokenizing and Parsing R Code pekkarr 2024-04-25 07:05 (UTC)
r-sp 2.1.4-1 2 0.00 Classes and Methods for Spatial Data pekkarr 2024-04-30 18:02 (UTC)
r-spacepac 1.42.0-1 0 0.00 Identification of Mutational Clusters in 3D Protein Space via Simulation. BioArchLinuxBot 2024-05-03 18:25 (UTC)
r-spacetime 1.3.1-1 0 0.00 Classes and Methods for Spatio-Temporal Data BioArchLinuxBot 2023-12-06 00:05 (UTC)
r-spam 2.10.0-3 0 0.00 SPArse Matrix BioArchLinuxBot 2024-04-25 07:07 (UTC)
r-spamm 4.4.16-1 0 0.00 Mixed-Effect Models, with or without Spatial Random Effects pekkarr 2024-03-23 11:26 (UTC)
r-spaniel 1.18.0-1 0 0.00 Spatial Transcriptomics Analysis BioArchLinuxBot 2024-05-03 08:41 (UTC)
r-sparql 1.16-4 0 0.00 SPARQL client BioArchLinuxBot 2022-06-07 13:22 (UTC)
r-sparrow 1.10.1-1 0 0.00 Take command of set enrichment analyses through a unified interface BioArchLinuxBot 2024-05-09 00:03 (UTC)
r-sparsearray 1.4.5-1 0 0.00 High-performance sparse data representation and manipulation in R pekkarr 2024-05-22 18:05 (UTC)
r-sparsedossa 1.24.0-2 0 0.00 Sparse Data Observations for Simulating Synthetic Abundance BioArchLinuxBot 2024-02-11 18:05 (UTC)
r-sparseinv 0.1.3-4 0 0.00 Computation of the Sparse Inverse Subset BioArchLinuxBot 2022-06-06 15:45 (UTC)
r-sparsem 1.81-11 1 0.00 Sparse Linear Algebra pekkarr 2024-04-24 18:29 (UTC)
r-sparsematrixstats 1.16.0-1 0 0.00 Summary Statistics for Rows and Columns of Sparse Matrices BioArchLinuxBot 2024-05-01 18:28 (UTC)
r-sparsemvn 0.2.2-4 0 0.00 Multivariate Normal Functions for Sparse Covariance and Precision Matrices BioArchLinuxBot 2022-06-06 15:45 (UTC)
r-sparsenetgls 1.22.0-1 0 0.00 Using Gaussian graphical structue learning estimation in generalized least squared regression for multivariate normal regression BioArchLinuxBot 2024-05-01 21:52 (UTC)
r-sparsepca 0.1.2-7 0 0.00 Sparse Principal Component Analysis (SPCA) BioArchLinuxBot 2024-04-08 18:14 (UTC)
r-sparsesignatures 2.14.0-1 0 0.00 SparseSignatures BioArchLinuxBot 2024-05-03 08:45 (UTC)
r-sparsesvd 0.2.2-3 0 0.00 Sparse Truncated Singular Value Decomposition (from 'SVDLIBC') BioArchLinuxBot 2024-03-14 18:08 (UTC)
r-spasim 1.6.0-1 0 0.00 Spatial point data simulator for tissue images pekkarr 2024-05-03 09:02 (UTC)
r-spatest 3.1.2-7 0 0.00 Score Test and Meta-Analysis Based on Saddlepoint Approximation BioArchLinuxBot 2024-04-05 18:06 (UTC)
r-spatialcpie 1.20.0-1 0 0.00 Cluster analysis of Spatial Transcriptomics data BioArchLinuxBot 2024-05-03 08:13 (UTC)
r-spatialde 1.10.0-1 0 0.00 R wrapper for SpatialDE BioArchLinuxBot 2024-05-03 08:52 (UTC)
r-spatialdecon 1.14.0-1 0 0.00 Deconvolution of mixed cells from spatial and/or bulk gene expression data BioArchLinuxBot 2024-05-03 08:38 (UTC)
r-spatialexperiment 1.14.0-1 0 0.00 S4 Class for Spatial Experiments handling BioArchLinuxBot 2024-05-03 07:42 (UTC)
r-spatialextremes 2.1.0-5 0 0.00 Modelling Spatial Extremes BioArchLinuxBot 2022-06-06 15:50 (UTC)
r-spatialfeatureexperiment 1.6.1-1 0 0.00 Integrating SpatialExperiment with Simple Features in sf pekkarr 2024-05-19 00:13 (UTC)
r-spatialheatmap 2.10.0-1 0 0.00 Creating spatial heatmaps from R and Shiny BioArchLinuxBot 2024-05-04 18:13 (UTC)
r-spatiallibd 1.16.0-1 0 0.00 an R/Bioconductor package to visualize spatially-resolved transcriptomics data pekkarr 2024-05-04 18:11 (UTC)
r-spatialtools 1.0.5-1 0 0.00 Tools for Spatial Data Analysis BioArchLinuxBot 2023-07-19 00:03 (UTC)
r-spatstat 3.0.8-1 0 0.00 Spatial Point Pattern Analysis, Model-Fitting, Simulation, Tests BioArchLinuxBot 2024-03-26 18:08 (UTC)
r-spatstat.core 2.4.4-6 0 0.00 Core Functionality of the 'spatstat' Family BioArchLinuxBot 2022-12-31 06:02 (UTC)
r-spatstat.data 3.0.4-2 0 0.00 Datasets for 'spatstat' Family BioArchLinuxBot 2024-04-14 12:05 (UTC)
r-spatstat.explore 3.2.7-1 0 0.00 Exploratory Data Analysis for the 'spatstat' Family BioArchLinuxBot 2024-03-21 06:23 (UTC)
r-spatstat.geom 3.2.9-1 0 0.00 Geometrical Functionality of the 'spatstat' Family BioArchLinuxBot 2024-02-28 12:01 (UTC)
r-spatstat.linnet 3.1.5-1 0 0.00 Linear Networks Functionality of the 'spatstat' Family BioArchLinuxBot 2024-03-25 12:05 (UTC)
r-spatstat.model 3.2.11-1 0 0.00 Parametric Statistical Modelling for the 'spatstat' Family BioArchLinuxBot 2024-03-22 18:01 (UTC)
r-spatstat.random 3.2.3-1 0 0.00 Random Generation Functionality for the 'spatstat' Family BioArchLinuxBot 2024-02-29 12:29 (UTC)
r-spatstat.sparse 3.0.3-2 0 0.00 Sparse Three-Dimensional Arrays and Linear Algebra Utilities BioArchLinuxBot 2024-04-14 12:06 (UTC)
r-spatstat.utils 3.0.4-2 0 0.00 Utility Functions for 'spatstat' BioArchLinuxBot 2024-03-16 12:01 (UTC)
r-spatzie 1.10.0-1 0 0.00 Identification of enriched motif pairs from chromatin interaction data BioArchLinuxBot 2024-05-03 19:19 (UTC)
r-spbayes 0.4.7-1 0 0.00 Univariate and Multivariate Spatial-Temporal Modeling BioArchLinuxBot 2023-12-12 00:04 (UTC)
r-spd 2.0.1-3 1 0.08 Semi Parametric Distribution BioArchLinuxBot 2024-03-15 14:16 (UTC)
r-spdata 2.3.0-3 0 0.00 Datasets for Spatial Analysis pekkarr 2024-04-25 00:25 (UTC)
r-spdep 1.3.3-1 0 0.00 Spatial Dependence: Weighting Schemes, Statistics pekkarr 2024-02-07 18:05 (UTC)
r-spdl 0.0.5-1 0 0.00 Wrapper for 'RcppSpdlog' Functions BioArchLinuxBot 2023-06-18 18:04 (UTC)
r-speaq 2.7.0-6 1 0.00 Tools for Nuclear Magnetic Resonance (NMR) Spectra Alignment, Peak Based Processing, Quantitative Analysis and Visualizations BioArchLinuxBot 2022-11-26 15:40 (UTC)
r-speckle 1.4.0-1 0 0.00 Statistical methods for analysing single cell RNA-seq data pekkarr 2024-05-11 12:18 (UTC)
r-specl 1.38.0-1 0 0.00 specL - Prepare Peptide Spectrum Matches for Use in Targeted Proteomics BioArchLinuxBot 2024-05-01 20:04 (UTC)
r-specond 1.58.0-1 0 0.00 Condition specific detection from expression data BioArchLinuxBot 2024-05-01 19:44 (UTC)
r-spectra 1.14.1-1 0 0.00 Spectra Infrastructure for Mass Spectrometry Data BioArchLinuxBot 2024-05-18 00:01 (UTC)
r-spectraltad 1.20.0-1 0 0.00 SpectralTAD: Hierarchical TAD detection using spectral clustering BioArchLinuxBot 2024-05-03 07:49 (UTC)
r-speedglm 0.3.5-3 0 0.00 Fitting Linear and Generalized Linear Models to Large Data Sets BioArchLinuxBot 2024-04-25 09:34 (UTC)
r-spelling 2.3.0-1 0 0.00 Tools for Spell Checking in R pekkarr 2024-03-05 06:01 (UTC)
r-spem 1.44.0-1 0 0.00 S-system parameter estimation method BioArchLinuxBot 2024-05-01 18:37 (UTC)
r-spia 2.56.0-1 0 0.00 Signaling Pathway Impact Analysis (SPIA) using combined evidence of pathway over-representation and unusual signaling perturbations BioArchLinuxBot 2024-05-03 07:02 (UTC)
r-spiat 1.6.0-1 0 0.00 Spatial Image Analysis of Tissues pekkarr 2024-05-03 09:12 (UTC)
r-spicyr 1.16.0-1 0 0.00 Spatial analysis of in situ cytometry data BioArchLinuxBot 2024-05-03 13:43 (UTC)
r-spidermir 1.32.0-1 0 0.00 SpidermiR: An R/Bioconductor package for integrative network analysis with miRNA data BioArchLinuxBot 2023-10-26 05:01 (UTC)
r-spikeli 2.64.0-1 0 0.00 Affymetrix Spike-in Langmuir Isotherm Data Analysis Tool BioArchLinuxBot 2024-05-02 03:18 (UTC)
r-spiky 1.10.0-1 0 0.00 Spike-in calibration for cell-free MeDIP BioArchLinuxBot 2024-05-03 08:19 (UTC)
r-spktools 1.60.0-1 0 0.00 Methods for Spike-in Arrays BioArchLinuxBot 2024-05-02 12:44 (UTC)
r-splancs 2.01.44-2 0 0.00 Spatial and Space-Time Point Pattern Analysis BioArchLinuxBot 2024-04-08 18:06 (UTC)
r-splatter 1.28.0-1 0 0.00 Simple Simulation of Single-cell RNA Sequencing Data BioArchLinuxBot 2024-05-03 07:48 (UTC)
r-splicewiz 1.6.0-1 0 0.00 interactive analysis and visualization of alternative splicing in R pekkarr 2024-05-04 18:20 (UTC)
r-splicingfactory 1.12.0-1 0 0.00 Splicing Diversity Analysis for Transcriptome Data BioArchLinuxBot 2024-05-03 07:35 (UTC)
r-splicinggraphs 1.44.0-1 0 0.00 Create, manipulate, visualize splicing graphs, and assign RNA-seq reads to them BioArchLinuxBot 2024-05-03 08:14 (UTC)
r-splines2 0.5.2-1 0 0.00 Regression Spline Functions and Classes BioArchLinuxBot 2024-05-09 18:18 (UTC)
r-splinetimer 1.32.0-1 0 0.00 Time-course differential gene expression data analysis using spline regression models followed by gene association network reconstruction BioArchLinuxBot 2024-05-03 12:28 (UTC)
r-splinter 1.30.0-1 0 0.00 Splice Interpreter of Transcripts BioArchLinuxBot 2024-05-04 18:06 (UTC)

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