146 packages found. Page 1 of 3.

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Name Version Votes Popularity? Description Maintainer Last Updated
r-epimix 1.4.0-4 0 0.00 an integrative tool for the population-level analysis of DNA methylation pekkarr 2024-04-27 22:00 (UTC)
r-dnafusion 1.4.0-3 0 0.00 Identification of gene fusions using paired-end sequencing pekkarr 2024-04-27 21:12 (UTC)
r-gdnainrnaseqdata 1.2.0-3 0 0.00 RNA-seq data with different levels of gDNA contamination pekkarr 2024-04-27 13:17 (UTC)
r-genomautomorphism 1.4.0-3 0 0.00 Compute the automorphisms between DNA's Abelian group representations pekkarr 2024-04-26 17:53 (UTC)
r-msa2dist 1.6.0-3 0 0.00 MSA2dist calculates pairwise distances between all sequences of a DNAStringSet or a AAStringSet using a custom score matrix and conducts codon based analysis pekkarr 2024-04-26 17:52 (UTC)
r-rprimer 1.6.0-3 0 0.00 Design Degenerate Oligos from a Multiple DNA Sequence Alignment pekkarr 2024-04-26 14:34 (UTC)
r-plasmut 1.0.0-3 0 0.00 Stratifying mutations observed in cell-free DNA and white blood cells as germline, hematopoietic, or somatic pekkarr 2024-04-25 11:23 (UTC)
r-dnabarcodes 1.32.0-2 0 0.00 A tool for creating and analysing DNA barcodes used in Next Generation Sequencing multiplexing experiments BioArchLinuxBot 2024-04-25 02:27 (UTC)
r-dnacopy 1.76.0-3 0 0.00 DNA Copy Number Data Analysis BioArchLinuxBot 2024-04-24 18:52 (UTC)
mednaffe 0.9.3-1 36 1.01 front-end (GUI) for mednafen emulator Vaporeon 2024-04-22 04:08 (UTC)
libdvdnav-git 6.1.1.23.g9831fe0-1 16 0.00 Library to navigate DVD disks. (GIT version) sl1pkn07 2024-04-20 16:10 (UTC)
r-methped 1.30.0-2 0 0.00 A DNA methylation classifier tool for the identification of pediatric brain tumor subtypes BioArchLinuxBot 2024-04-18 18:29 (UTC)
chromium-extension-adnauseam 1:3.21.0-1 1 0.00 An ad-blocker which silently simulates clicks on each blocked ad, confusing trackers gardenappl 2024-04-14 00:08 (UTC)
r-fscanr 1.12.0-1 0 0.00 Detect Programmed Ribosomal Frameshifting Events from mRNA/cDNA BLASTX Output BioArchLinuxBot 2024-04-13 18:01 (UTC)
mednafen-highscore-git r19.af13095-1 0 0.00 Highscore port of Mednafen yochananmarqos 2024-04-06 20:59 (UTC)
r-cfdnakit 1.0.1-1 0 0.00 Fragmen-length analysis package from high-throughput sequencing of cell-free DNA (cfDNA) pekkarr 2024-04-06 06:01 (UTC)
r-mbamethyl 1.36.0-2 0 0.00 Model-based analysis of DNA methylation data BioArchLinuxBot 2024-03-29 18:03 (UTC)
escribe-suite-bin 2_SP55-1 5 0.00 Evolv eScribe Suite - DNA Management Suite and Ecigstats - INTL Version Khorne 2024-03-26 13:55 (UTC)
oxdna-cuda-git v3.6.1.r10.g9af1214a-1 2 0.16 DNA/RNA/etc simulator, from lorenzo-rovigatti/oxDNA, with CUDA support and analysis tools. cge 2024-03-23 10:33 (UTC)
r-gdnax 1.0.2-1 0 0.00 Diagnostics for assessing genomic DNA contamination in RNA-seq data pekkarr 2024-03-20 18:17 (UTC)
midna-theme 7.0.2-1 7 0.00 KaOS Plasma 6 Look & Feel theme files noraj 2024-03-08 10:20 (UTC)
r-seqlogo 1.68.0-2 0 0.00 Sequence logos for DNA sequence alignments BioArchLinuxBot 2024-03-07 12:11 (UTC)
r-soniclength 1.4.7-9 0 0.00 Estimating Abundance of Clones from DNA Fragmentation Data BioArchLinuxBot 2024-03-07 00:04 (UTC)
r-cellbarcode 1.8.1-1 0 0.00 Cellular DNA Barcode Analysis toolkit BioArchLinuxBot 2024-02-22 06:02 (UTC)
mingw-w64-libidn2 2.3.7-1 3 0.00 A free software implementation of IDNA2008 (mingw-w64) drakkan 2024-02-19 12:23 (UTC)
android-x86-libidn2 2.3.7-1 0 0.00 A free software implementation of IDNA2008 (android) hipersayan_x 2024-02-18 20:38 (UTC)
android-x86-64-libidn2 2.3.7-1 0 0.00 A free software implementation of IDNA2008 (android) hipersayan_x 2024-02-18 20:38 (UTC)
android-armv7a-eabi-libidn2 2.3.7-1 0 0.00 A free software implementation of IDNA2008 (android) hipersayan_x 2024-02-18 20:37 (UTC)
android-aarch64-libidn2 2.3.7-1 0 0.00 A free software implementation of IDNA2008 (android) hipersayan_x 2024-02-18 20:36 (UTC)
motifsampler 3.2-1 0 0.00 The Gibbs Motif Sampler for identifying motifs, conserved regions, in DNA or protein sequences orphan 2024-02-18 08:06 (UTC)
r-pscbs 0.67.0-1 0 0.00 Analysis of Parent-Specific DNA Copy Numbers BioArchLinuxBot 2024-02-18 00:02 (UTC)
fastuniq 1.1-1 0 0.00 ultrafast de novo tool for removal of duplicates in paired short DNA sequence reads in FASTQ format https://doi.org/10.1371/journal.pone.0052249 malacology 2024-02-14 18:01 (UTC)
r-maigespack 1.64.0-2 0 0.00 Functions to handle cDNA microarray data, including several methods of data analysis BioArchLinuxBot 2024-02-11 18:05 (UTC)
r-scmet 1.4.0-3 0 0.00 Bayesian modelling of cell-to-cell DNA methylation heterogeneity pekkarr 2024-02-08 13:59 (UTC)
fastdnaml 1.2.2-0 0 0.00 A tool for construction of phylogenetic trees of DNA sequences using maximum likelihood https://doi.org/10.1093/bioinformatics/10.1.41 malacology 2024-02-05 02:14 (UTC)
dnarates 1.1.0-0 0 0.00 estimating site-specific nucleotide substitution rates by maximum likelihood https://doi.org/10.1093/nar/22.17.3485 malacology 2024-02-04 17:28 (UTC)
diamond 2.1.9-1 3 0.00 High performance sequence aligner for protein and translated DNA searches with big sequence data. https://doi.org/10.1038/s41592-021-01101-x BioArchLinuxBot 2024-01-31 18:09 (UTC)
python2-idna 2.10-4 2 0.00 Internationalized Domain Names in Applications (IDNA) tallero 2024-01-29 17:42 (UTC)
oxdna-cuda 3.6.0-1 1 0.17 DNA/RNA/etc simulator, with CUDA support and analysis tools. cge 2024-01-27 18:00 (UTC)
infernal 1.1.5-1 1 0.00 Search DNA sequence databases for RNA structure and sequence similarities using covariance models (CMs) RaumZeit 2024-01-20 13:01 (UTC)
gblocks 0.91b-7 1 0.00 A program written in ANSI C language that eliminates poorly aligned positions and divergent regions of an alignment of DNA or protein sequences. https://doi.org/10.1093/oxfordjournals.molbev.a026334 malacology 2024-01-18 12:01 (UTC)
r-podcall 1.10.1-1 0 0.00 Positive Droplet Calling for DNA Methylation Droplet Digital PCR BioArchLinuxBot 2024-01-18 00:05 (UTC)
mashmap 3.1.3-1 0 0.00 Fast approximate aligner for long DNA sequences kbipinkumar 2024-01-04 18:02 (UTC)
python-drawtetrado 1.5.0-2 0 0.00 Visualize quadruplexes and G4-helices in DNA and RNA structures tzok 2024-01-04 12:39 (UTC)
python-dnaio 1.2.0-1 0 0.00 Python library for very efficient parsing and writing of FASTQ and FASTA files kbipinkumar 2023-12-11 18:26 (UTC)
jellyfish 2.3.1-1 5 0.00 A tool for fast, memory-efficient counting of k-mers in DNA buggs 2023-12-09 12:09 (UTC)
r-epimutacions 1.6.1-1 0 0.00 Robust outlier identification for DNA methylation data pekkarr 2023-12-09 10:40 (UTC)
phyml-mpi 1:3.3.20220408-1 1 0.00 Builds phylogenies from DNA or protein sequences using a maximum likelihood approach, using multiple processors Rhinoceros 2023-12-08 02:48 (UTC)
r-inetgrate 1.0.0-1 0 0.00 Integrates DNA methylation data with gene expression in a single gene network pekkarr 2023-11-25 11:22 (UTC)
spaln 3.0.2-2 0 0.00 Splicing-aware transcript (cDNA/EST or protein sequences) alignment to genomic DNA kbipinkumar 2023-11-17 07:09 (UTC)

146 packages found. Page 1 of 3.

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