794 packages found. Page 4 of 16.

« First ‹ Previous 1 2 3 4 5 6 7 8 9 .. 16 Next › Last »

Name Version Votes Popularity? Description Maintainer Last Updated
r-r453plus1toolbox 1.54.0-1 0 0.00 A package for importing and analyzing data from Roche's Genome Sequencer System BioArchLinuxBot 2024-05-03 05:01 (UTC)
r-seqcat 1.26.0-1 0 0.00 High Throughput Sequencing Cell Authentication Toolkit BioArchLinuxBot 2024-05-03 04:49 (UTC)
r-apalyzer 1.18.0-1 0 0.00 A toolkit for APA analysis using RNA-seq data BioArchLinuxBot 2024-05-03 04:48 (UTC)
r-purecn 2.10.0-1 0 0.00 Copy number calling and SNV classification using targeted short read sequencing BioArchLinuxBot 2024-05-03 04:45 (UTC)
r-deepsnv 1.50.0-1 0 0.00 Detection of subclonal SNVs in deep sequencing data. BioArchLinuxBot 2024-05-03 04:39 (UTC)
r-cnvrd2 1.42.0-1 0 0.00 CNVrd2: a read depth-based method to detect and genotype complex common copy number variants from next generation sequencing data. BioArchLinuxBot 2024-05-03 04:38 (UTC)
r-dss 2.52.0-1 0 0.00 Dispersion shrinkage for sequencing data BioArchLinuxBot 2024-05-03 04:31 (UTC)
r-seqarchrplus 1.4.0-1 0 0.00 Downstream analyses of promoter sequence architectures and HTML report generation pekkarr 2024-05-03 04:24 (UTC)
r-magpie 1.4.0-1 0 0.00 MeRIP-Seq data Analysis for Genomic Power Investigation and Evaluation pekkarr 2024-05-03 04:22 (UTC)
r-eventpointer 3.12.0-1 0 0.00 An effective identification of alternative splicing events using junction arrays and RNA-Seq data BioArchLinuxBot 2024-05-03 04:20 (UTC)
r-ruvseq 1.38.0-1 0 0.00 Remove Unwanted Variation from RNA-Seq Data BioArchLinuxBot 2024-05-03 04:15 (UTC)
r-scmerge 1.20.0-1 0 0.00 scMerge: Merging multiple batches of scRNA-seq data BioArchLinuxBot 2024-05-03 04:01 (UTC)
r-rbec 1.12.0-1 0 0.00 Rbec: a tool for analysis of amplicon sequencing data from synthetic microbial communities BioArchLinuxBot 2024-05-03 03:43 (UTC)
r-transcriptr 1.32.0-1 0 0.00 An Integrative Tool for ChIP- And RNA-Seq Based Primary Transcripts Detection and Quantification BioArchLinuxBot 2024-05-03 03:42 (UTC)
r-soggi 1.36.0-1 0 0.00 Visualise ChIP-seq, MNase-seq and motif occurrence as aggregate plots Summarised Over Grouped Genomic Intervals BioArchLinuxBot 2024-05-03 03:41 (UTC)
r-rjmcmcnucleosomes 1.28.0-1 0 0.00 Bayesian hierarchical model for genome-wide nucleosome positioning with high-throughput short-read data (MNase-Seq) BioArchLinuxBot 2024-05-03 03:40 (UTC)
r-methinheritsim 1.26.0-1 0 0.00 Simulating Whole-Genome Inherited Bisulphite Sequencing Data BioArchLinuxBot 2024-05-03 03:37 (UTC)
r-cfdnapro 1.10.0-1 0 0.00 cfDNAPro Helps Characterise and Visualise Whole Genome Sequencing Data from Liquid Biopsy BioArchLinuxBot 2024-05-03 03:33 (UTC)
r-basic4cseq 1.40.0-1 0 0.00 Basic4Cseq: an R/Bioconductor package for analyzing 4C-seq data BioArchLinuxBot 2024-05-03 03:29 (UTC)
r-cleanupdtseq 1.42.0-1 0 0.00 cleanUpdTSeq cleans up artifacts from polyadenylation sites from oligo(dT)-mediated 3' end RNA sequending data BioArchLinuxBot 2024-05-03 03:28 (UTC)
r-chipcomp 1.34.0-1 0 0.00 Quantitative comparison of multiple ChIP-seq datasets BioArchLinuxBot 2024-05-03 03:27 (UTC)
r-codex 1.36.0-1 0 0.00 A Normalization and Copy Number Variation Detection Method for Whole Exome Sequencing BioArchLinuxBot 2024-05-03 03:24 (UTC)
r-scope 1.16.0-1 0 0.00 A normalization and copy number estimation method for single-cell DNA sequencing BioArchLinuxBot 2024-05-03 03:23 (UTC)
r-orfhunter 1.12.0-1 0 0.00 Predict open reading frames in nucleotide sequences BioArchLinuxBot 2024-05-03 03:21 (UTC)
r-motif2site 1.8.0-1 0 0.00 Detect binding sites from motifs and ChIP-seq experiments, and compare binding sites across conditions pekkarr 2024-05-03 03:20 (UTC)
r-bambu 3.6.0-1 0 0.00 Reference-guided isoform reconstruction and quantification for long read RNA-Seq data BioArchLinuxBot 2024-05-03 03:18 (UTC)
r-qsea 1.30.0-1 0 0.00 IP-seq data analysis and vizualization BioArchLinuxBot 2024-05-03 03:17 (UTC)
r-medips 1.56.0-1 0 0.00 DNA IP-seq data analysis BioArchLinuxBot 2024-05-03 03:16 (UTC)
r-methrix 1.18.0-1 0 0.00 Fast and efficient summarization of generic bedGraph files from Bisufite sequencing BioArchLinuxBot 2024-05-03 03:15 (UTC)
r-mmdiff2 1.32.0-1 0 0.00 Statistical Testing for ChIP-Seq data sets BioArchLinuxBot 2024-05-03 03:14 (UTC)
r-periodicdna 1.14.0-1 0 0.00 Set of tools to identify periodic occurrences of k-mers in DNA sequences BioArchLinuxBot 2024-05-03 03:08 (UTC)
r-beat 1.42.0-1 0 0.00 BEAT - BS-Seq Epimutation Analysis Toolkit BioArchLinuxBot 2024-05-03 03:07 (UTC)
r-bsseq 1.40.0-1 0 0.00 Analyze, manage and store bisulfite sequencing data BioArchLinuxBot 2024-05-03 02:57 (UTC)
r-dnafusion 1.6.0-1 0 0.00 Identification of gene fusions using paired-end sequencing pekkarr 2024-05-03 02:54 (UTC)
r-inspect 1.34.0-1 0 0.00 Modeling RNA synthesis, processing and degradation with RNA-seq data BioArchLinuxBot 2024-05-03 02:47 (UTC)
r-rmmquant 1.22.0-1 0 0.00 RNA-Seq multi-mapping Reads Quantification Tool BioArchLinuxBot 2024-05-03 02:46 (UTC)
r-tress 1.10.0-1 0 0.00 Toolbox for mRNA epigenetics sequencing analysis BioArchLinuxBot 2024-05-03 02:42 (UTC)
r-cssq 1.16.0-1 0 0.00 Chip-seq Signal Quantifier Pipeline BioArchLinuxBot 2024-05-03 02:31 (UTC)
r-sgseq 1.38.0-1 0 0.00 Splice event prediction and quantification from RNA-seq data BioArchLinuxBot 2024-05-03 02:29 (UTC)
r-edaseq 2.38.0-1 0 0.00 Exploratory Data Analysis and Normalization for RNA-Seq BioArchLinuxBot 2024-05-03 02:23 (UTC)
r-chipxpress 1.48.0-1 0 0.00 ChIPXpress: enhanced transcription factor target gene identification from ChIP-seq and ChIP-chip data using publicly available gene expression profiles BioArchLinuxBot 2024-05-03 02:15 (UTC)
r-scpipe 2.4.0-1 0 0.00 pipeline for single cell RNA-seq data analysis BioArchLinuxBot 2024-05-03 01:58 (UTC)
r-sccb2 1.14.0-1 0 0.00 CB2 improves power of cell detection in droplet-based single-cell RNA sequencing data BioArchLinuxBot 2024-05-03 01:56 (UTC)
r-m3drop 1.30.0-1 0 0.00 Michaelis-Menten Modelling of Dropouts in single-cell RNASeq BioArchLinuxBot 2024-05-03 01:54 (UTC)
r-peco 1.16.0-1 0 0.00 A Supervised Approach for **P**r**e**dicting **c**ell Cycle Pr**o**gression using scRNA-seq data BioArchLinuxBot 2024-05-03 01:51 (UTC)
r-muscat 1.18.0-1 0 0.00 Multi-sample multi-group scRNA-seq data analysis tools BioArchLinuxBot 2024-05-03 01:47 (UTC)
r-meb 1.18.0-1 0 0.00 A normalization-invariant minimum enclosing ball method to detect differentially expressed genes for RNA-seq data BioArchLinuxBot 2024-05-03 01:39 (UTC)
r-citefuse 1.16.0-1 0 0.00 CiteFuse: multi-modal analysis of CITE-seq data BioArchLinuxBot 2024-05-03 01:38 (UTC)
r-singlecellsignalr 1.16.0-1 0 0.00 Cell Signalling Using Single Cell RNAseq Data Analysis BioArchLinuxBot 2024-05-03 01:37 (UTC)
r-dino 1.10.0-1 0 0.00 Normalization of Single-Cell mRNA Sequencing Data BioArchLinuxBot 2024-05-03 01:36 (UTC)

794 packages found. Page 4 of 16.

« First ‹ Previous 1 2 3 4 5 6 7 8 9 .. 16 Next › Last »