r-r453plus1toolbox
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1.54.0-1 |
0 |
0.00
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A package for importing and analyzing data from Roche's Genome Sequencer System |
BioArchLinuxBot
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2024-05-03 05:01 (UTC) |
r-seqcat
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1.26.0-1 |
0 |
0.00
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High Throughput Sequencing Cell Authentication Toolkit |
BioArchLinuxBot
|
2024-05-03 04:49 (UTC) |
r-apalyzer
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1.18.0-1 |
0 |
0.00
|
A toolkit for APA analysis using RNA-seq data |
BioArchLinuxBot
|
2024-05-03 04:48 (UTC) |
r-purecn
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2.10.0-1 |
0 |
0.00
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Copy number calling and SNV classification using targeted short read sequencing |
BioArchLinuxBot
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2024-05-03 04:45 (UTC) |
r-deepsnv
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1.50.0-1 |
0 |
0.00
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Detection of subclonal SNVs in deep sequencing data. |
BioArchLinuxBot
|
2024-05-03 04:39 (UTC) |
r-cnvrd2
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1.42.0-1 |
0 |
0.00
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CNVrd2: a read depth-based method to detect and genotype complex common copy number variants from next generation sequencing data. |
BioArchLinuxBot
|
2024-05-03 04:38 (UTC) |
r-dss
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2.52.0-1 |
0 |
0.00
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Dispersion shrinkage for sequencing data |
BioArchLinuxBot
|
2024-05-03 04:31 (UTC) |
r-seqarchrplus
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1.4.0-1 |
0 |
0.00
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Downstream analyses of promoter sequence architectures and HTML report generation |
pekkarr
|
2024-05-03 04:24 (UTC) |
r-magpie
|
1.4.0-1 |
0 |
0.00
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MeRIP-Seq data Analysis for Genomic Power Investigation and Evaluation |
pekkarr
|
2024-05-03 04:22 (UTC) |
r-eventpointer
|
3.12.0-1 |
0 |
0.00
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An effective identification of alternative splicing events using junction arrays and RNA-Seq data |
BioArchLinuxBot
|
2024-05-03 04:20 (UTC) |
r-ruvseq
|
1.38.0-1 |
0 |
0.00
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Remove Unwanted Variation from RNA-Seq Data |
BioArchLinuxBot
|
2024-05-03 04:15 (UTC) |
r-scmerge
|
1.20.0-1 |
0 |
0.00
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scMerge: Merging multiple batches of scRNA-seq data |
BioArchLinuxBot
|
2024-05-03 04:01 (UTC) |
r-rbec
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1.12.0-1 |
0 |
0.00
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Rbec: a tool for analysis of amplicon sequencing data from synthetic microbial communities |
BioArchLinuxBot
|
2024-05-03 03:43 (UTC) |
r-transcriptr
|
1.32.0-1 |
0 |
0.00
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An Integrative Tool for ChIP- And RNA-Seq Based Primary Transcripts Detection and Quantification |
BioArchLinuxBot
|
2024-05-03 03:42 (UTC) |
r-soggi
|
1.36.0-1 |
0 |
0.00
|
Visualise ChIP-seq, MNase-seq and motif occurrence as aggregate plots Summarised Over Grouped Genomic Intervals |
BioArchLinuxBot
|
2024-05-03 03:41 (UTC) |
r-rjmcmcnucleosomes
|
1.28.0-1 |
0 |
0.00
|
Bayesian hierarchical model for genome-wide nucleosome positioning with high-throughput short-read data (MNase-Seq) |
BioArchLinuxBot
|
2024-05-03 03:40 (UTC) |
r-methinheritsim
|
1.26.0-1 |
0 |
0.00
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Simulating Whole-Genome Inherited Bisulphite Sequencing Data |
BioArchLinuxBot
|
2024-05-03 03:37 (UTC) |
r-cfdnapro
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1.10.0-1 |
0 |
0.00
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cfDNAPro Helps Characterise and Visualise Whole Genome Sequencing Data from Liquid Biopsy |
BioArchLinuxBot
|
2024-05-03 03:33 (UTC) |
r-basic4cseq
|
1.40.0-1 |
0 |
0.00
|
Basic4Cseq: an R/Bioconductor package for analyzing 4C-seq data |
BioArchLinuxBot
|
2024-05-03 03:29 (UTC) |
r-cleanupdtseq
|
1.42.0-1 |
0 |
0.00
|
cleanUpdTSeq cleans up artifacts from polyadenylation sites from oligo(dT)-mediated 3' end RNA sequending data |
BioArchLinuxBot
|
2024-05-03 03:28 (UTC) |
r-chipcomp
|
1.34.0-1 |
0 |
0.00
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Quantitative comparison of multiple ChIP-seq datasets |
BioArchLinuxBot
|
2024-05-03 03:27 (UTC) |
r-codex
|
1.36.0-1 |
0 |
0.00
|
A Normalization and Copy Number Variation Detection Method for Whole Exome Sequencing |
BioArchLinuxBot
|
2024-05-03 03:24 (UTC) |
r-scope
|
1.16.0-1 |
0 |
0.00
|
A normalization and copy number estimation method for single-cell DNA sequencing |
BioArchLinuxBot
|
2024-05-03 03:23 (UTC) |
r-orfhunter
|
1.12.0-1 |
0 |
0.00
|
Predict open reading frames in nucleotide sequences |
BioArchLinuxBot
|
2024-05-03 03:21 (UTC) |
r-motif2site
|
1.8.0-1 |
0 |
0.00
|
Detect binding sites from motifs and ChIP-seq experiments, and compare binding sites across conditions |
pekkarr
|
2024-05-03 03:20 (UTC) |
r-bambu
|
3.6.0-1 |
0 |
0.00
|
Reference-guided isoform reconstruction and quantification for long read RNA-Seq data |
BioArchLinuxBot
|
2024-05-03 03:18 (UTC) |
r-qsea
|
1.30.0-1 |
0 |
0.00
|
IP-seq data analysis and vizualization |
BioArchLinuxBot
|
2024-05-03 03:17 (UTC) |
r-medips
|
1.56.0-1 |
0 |
0.00
|
DNA IP-seq data analysis |
BioArchLinuxBot
|
2024-05-03 03:16 (UTC) |
r-methrix
|
1.18.0-1 |
0 |
0.00
|
Fast and efficient summarization of generic bedGraph files from Bisufite sequencing |
BioArchLinuxBot
|
2024-05-03 03:15 (UTC) |
r-mmdiff2
|
1.32.0-1 |
0 |
0.00
|
Statistical Testing for ChIP-Seq data sets |
BioArchLinuxBot
|
2024-05-03 03:14 (UTC) |
r-periodicdna
|
1.14.0-1 |
0 |
0.00
|
Set of tools to identify periodic occurrences of k-mers in DNA sequences |
BioArchLinuxBot
|
2024-05-03 03:08 (UTC) |
r-beat
|
1.42.0-1 |
0 |
0.00
|
BEAT - BS-Seq Epimutation Analysis Toolkit |
BioArchLinuxBot
|
2024-05-03 03:07 (UTC) |
r-bsseq
|
1.40.0-1 |
0 |
0.00
|
Analyze, manage and store bisulfite sequencing data |
BioArchLinuxBot
|
2024-05-03 02:57 (UTC) |
r-dnafusion
|
1.6.0-1 |
0 |
0.00
|
Identification of gene fusions using paired-end sequencing |
pekkarr
|
2024-05-03 02:54 (UTC) |
r-inspect
|
1.34.0-1 |
0 |
0.00
|
Modeling RNA synthesis, processing and degradation with RNA-seq data |
BioArchLinuxBot
|
2024-05-03 02:47 (UTC) |
r-rmmquant
|
1.22.0-1 |
0 |
0.00
|
RNA-Seq multi-mapping Reads Quantification Tool |
BioArchLinuxBot
|
2024-05-03 02:46 (UTC) |
r-tress
|
1.10.0-1 |
0 |
0.00
|
Toolbox for mRNA epigenetics sequencing analysis |
BioArchLinuxBot
|
2024-05-03 02:42 (UTC) |
r-cssq
|
1.16.0-1 |
0 |
0.00
|
Chip-seq Signal Quantifier Pipeline |
BioArchLinuxBot
|
2024-05-03 02:31 (UTC) |
r-sgseq
|
1.38.0-1 |
0 |
0.00
|
Splice event prediction and quantification from RNA-seq data |
BioArchLinuxBot
|
2024-05-03 02:29 (UTC) |
r-edaseq
|
2.38.0-1 |
0 |
0.00
|
Exploratory Data Analysis and Normalization for RNA-Seq |
BioArchLinuxBot
|
2024-05-03 02:23 (UTC) |
r-chipxpress
|
1.48.0-1 |
0 |
0.00
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ChIPXpress: enhanced transcription factor target gene identification from ChIP-seq and ChIP-chip data using publicly available gene expression profiles |
BioArchLinuxBot
|
2024-05-03 02:15 (UTC) |
r-scpipe
|
2.4.0-1 |
0 |
0.00
|
pipeline for single cell RNA-seq data analysis |
BioArchLinuxBot
|
2024-05-03 01:58 (UTC) |
r-sccb2
|
1.14.0-1 |
0 |
0.00
|
CB2 improves power of cell detection in droplet-based single-cell RNA sequencing data |
BioArchLinuxBot
|
2024-05-03 01:56 (UTC) |
r-m3drop
|
1.30.0-1 |
0 |
0.00
|
Michaelis-Menten Modelling of Dropouts in single-cell RNASeq |
BioArchLinuxBot
|
2024-05-03 01:54 (UTC) |
r-peco
|
1.16.0-1 |
0 |
0.00
|
A Supervised Approach for **P**r**e**dicting **c**ell Cycle Pr**o**gression using scRNA-seq data |
BioArchLinuxBot
|
2024-05-03 01:51 (UTC) |
r-muscat
|
1.18.0-1 |
0 |
0.00
|
Multi-sample multi-group scRNA-seq data analysis tools |
BioArchLinuxBot
|
2024-05-03 01:47 (UTC) |
r-meb
|
1.18.0-1 |
0 |
0.00
|
A normalization-invariant minimum enclosing ball method to detect differentially expressed genes for RNA-seq data |
BioArchLinuxBot
|
2024-05-03 01:39 (UTC) |
r-citefuse
|
1.16.0-1 |
0 |
0.00
|
CiteFuse: multi-modal analysis of CITE-seq data |
BioArchLinuxBot
|
2024-05-03 01:38 (UTC) |
r-singlecellsignalr
|
1.16.0-1 |
0 |
0.00
|
Cell Signalling Using Single Cell RNAseq Data Analysis |
BioArchLinuxBot
|
2024-05-03 01:37 (UTC) |
r-dino
|
1.10.0-1 |
0 |
0.00
|
Normalization of Single-Cell mRNA Sequencing Data |
BioArchLinuxBot
|
2024-05-03 01:36 (UTC) |