Have you tried using the flags -DWITH_MPI=ON and -DWITH_PETSC=ON as mentionned in the doc : http://www.dealii.org/8.4.1/index.html ?
You might also see subsection 3.3 External library locations http://www.dealii.org/8.4.1/users/cmake.html#configureext I have not tried with PETSC yet. Something might prevent deal-ii from finding the packages and unfortunately I cannot change the PKGBUILD for your needs (it should be done within deal-ii build system).
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Package Details: deal-ii 9.6.0-1
Package Actions
| Git Clone URL: | https://aur.archlinux.org/deal-ii.git (read-only, click to copy) |
|---|---|
| Package Base: | deal-ii |
| Description: | An Open Source Finite Element Differential Equations Analysis Library |
| Upstream URL: | https://www.dealii.org/ |
| Keywords: | fem pde science |
| Licenses: | LGPL-2.1-or-later |
| Submitter: | coincoin |
| Maintainer: | coincoin (drwells) |
| Last Packager: | drwells |
| Votes: | 15 |
| Popularity: | 0.000966 |
| First Submitted: | 2013-09-11 11:11 (UTC) |
| Last Updated: | 2024-08-23 22:02 (UTC) |
Dependencies (28)
- boost (boost-gitAUR)
- kokkosAUR (trilinosAUR)
- cmake (cmake-gitAUR) (make)
- adol-cAUR (adol-c-gitAUR, python-adolcAUR) (optional) – automatic differentiation library
- arpack (arpack-gitAUR) (optional) – Fortran77 subroutines designed to solve large scale eigenvalue problems
- assimp (assimp-gitAUR) (optional) – Library to import various well-known 3D model formats in an uniform manner
- cgal (cgal-gitAUR) (optional) – Computational Geometry Algorithms Library
- gmshAUR (gmsh-gitAUR, gmsh-binAUR) (optional) – An automatic 3D finite element mesh generator with pre and post-processing facilities
- gsl (gsl-gitAUR) (optional) – A modern numerical library for C and C++ programmers
- hdf5-openmpi (optional) – General purpose library and file format for storing scientific data
- intel-mkl (intel-oneapi-mkl) (optional) – Intel Math Kernel Library
- lapack (aocl-libflame-aoccAUR, lapack-gitAUR, atlas-lapackAUR, blas-aocl-gccAUR, blas-aocl-aoccAUR, openblas-lapackAUR, blas-mklAUR, aocl-libflameAUR, blas-openblas) (optional) – Linear Algebra PACKage
- metisAUR (optional) – partitioning graphs, finite element meshes, fill reducing orderings for sparse matrices.
- muparser (optional) – A fast math parser library
- opencascade (opencascade-gitAUR, opencascade-rcAUR, opencascade-f3dAUR) (optional) – Open CASCADE Technology, 3D modeling & numerical simulation
- openmpi (openmpi-gitAUR) (optional) – High performance message passing library (MPI)
- p4est-deal-iiAUR (optional) – The parallel forest (p4est) library, built to work with deal.II
- parmetisAUR (parmetis-gitAUR) (optional) – A parallel graph partitioning library
- petscAUR (petsc-gitAUR, petsc-complexAUR) (optional) – Portable, extensible toolkit for scientific computation
- scalapackAUR (optional) – subset of scalable LAPACK routines redesigned for distributed memory MIMD parallel computers
- Show 8 more dependencies...
Required by (0)
Sources (1)
coincoin commented on 2017-01-24 13:56 (UTC) (edited on 2017-01-24 14:03 (UTC) by coincoin)
chuckdaniels commented on 2017-01-24 11:36 (UTC)
Compilation with OpenMPI and PETSC is not working even if the packages are installed. I've managed to make deal-II detect PETSC with these flags:
-DPETSC_DIR="/opt/petsc/linux-c-opt/"
-DPETSC_PETSCVARIABLES="/opt/petsc/linux-c-opt/lib/petsc/conf"
However, it does not activate this functionality since MPI is not properly detected.
coincoin commented on 2016-02-01 15:51 (UTC)
@asartori86 Indeed, I will also remove Lapack which is optional. Every packages are actually optional. Thanks I ll change that.
asartori86 commented on 2016-02-01 15:47 (UTC)
I, why did you set that boost and openmpi are required dep?
In fact, deal-ii is shipped with bundled boost and it can run fine also without mpi.
Pinned Comments
drwells commented on 2024-06-19 03:16 (UTC)
I've updated to 9.5.2 and patched SUNDIALS.
9.6 should be out in the next month or two!