Package Details: insight-toolkit 4.13.1-10

Git Clone URL: https://aur.archlinux.org/insight-toolkit.git (read-only)
Package Base: insight-toolkit
Description: Cross-platform system that provides developers with an extensive suite of software tools for image analysis
Upstream URL: http://www.itk.org/
Licenses: Apache
Submitter: joelsc
Maintainer: crmullins
Last Packager: crmullins
Votes: 34
Popularity: 0.655709
First Submitted: 2008-11-16 19:36
Last Updated: 2018-12-16 05:28

Dependencies (20)

Sources (1)

Latest Comments

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crmullins commented on 2018-12-16 05:33

This should be fixed now that the GDCM package is updated to use 2.8.8. The issue was that before we were not using the system GDCM, so ITK was building the version bundled with it, which builds (and then tries to install) its own openjpeg2 -- ignoring the ITK_USE_SYSTEM_JPEG and GDCM_USE_SYSTEM_OPENJPEG config variables. Please reach out if you have any other issues.

flipmess commented on 2018-12-14 20:32

hi, i get this error after build.

(1/1) checking for file conflicts [############################################################################] 100% error: failed to commit transaction (conflicting files) insight-toolkit: /usr/lib/pkgconfig/libopenjp2.pc exists in filesystem (owned by openjpeg2) Errors occurred, no packages were upgraded.

geosam commented on 2018-07-30 22:21

Fix the GCC 8: https://gist.github.com/samtux/b7cf81b208671425589508d2c1978bfe

lotsocats commented on 2018-07-06 19:02

Trouble building with GCC 8. There's a patch here:

https://github.com/InsightSoftwareConsortium/ITK/commit/4afac33fd2680d983989e4cee00605fa82439cce#diff-4e6c81f8e09f8b7a7b6f54c10c849617

m-pilia commented on 2018-03-18 10:34

I had troubles building 4.13 with Python wrappers using gcc, castxml failed being unable to find the headers of the standard C++ library, however I solved by building everything with clang.

<s>I also had linking problems with system GDCM (several symbols missing), I tried both with the version on AUR (2.8.3) and the more recent 2.8.4, with no luck. In the end I circumvented the problem by using the bundled version of GDCM, even though I do not like this solution...</s>

Edit: I solved the GDCM linking issue, actually it does not happen with the config in this PKGBUILD, it was related to some of the additional ITK modules I enabled for the build. Still I cannot make CastXML work with gcc, but that is a minor issue imho.

bobschi commented on 2018-01-29 18:34

Please update to version 4.13.0 and add the follwing two CMake flags, which are necessary for minc-toolkit-v2:

-DModule_ITKIOMINC:BOOL=ON -DModule_ITKIOTransformMINC:BOOL=ON

Also gtest (https://www.archlinux.org/packages/community/x86_64/gtest/) is a dependency now.

crmullins commented on 2017-06-27 02:19

Hi all, 4.12.0 is up, please let me know if you have any issues while I continue to test.

@yan12125, I will look into this, thanks for bringing it up.

crmullins commented on 2017-06-22 23:20

Thanks geosam! I should be able to get to this next week at the latest. Sorry about the delay.

geosam commented on 2017-06-22 23:07

Please update to 4.12, this is the patch for update:

https://gist.github.com/samtux/42abe932e0be127e2de21354e4870933

yan12125 commented on 2017-05-17 22:04

Couldn't build with gcc 7.1 in [testing].

[ 1%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/CMakeFiles/itkvcl.dir/vcl_deprecated.cxx.o
In file included from /tmp/yaourt-tmp-yen/aur-insight-toolkit/src/InsightToolkit-4.11.0/Modules/ThirdParty/VNL/src/vxl/vcl/vcl_iostream.h:5:0,
from /tmp/yaourt-tmp-yen/aur-insight-toolkit/src/InsightToolkit-4.11.0/Modules/ThirdParty/VNL/src/vxl/vcl/vcl_deprecated.cxx:4:
/tmp/yaourt-tmp-yen/aur-insight-toolkit/src/InsightToolkit-4.11.0/Modules/ThirdParty/VNL/src/vxl/vcl/vcl_compiler.h:79:4: error: #error "Dunno about this gcc"
# error "Dunno about this gcc"
^~~~~

Could you add the patch https://github.com/InsightSoftwareConsortium/ITK/commit/6dbbcc78093918f7dc2e859a0d1f1b80adb26de4 before ITK 4.12 is released?