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Package Details: petsc 3.22.3-1

Package Actions

Git Clone URL:	https://aur.archlinux.org/petsc.git (read-only, click to copy)
Package Base:	petsc
Description:	Portable, extensible toolkit for scientific computation
Upstream URL:	https://petsc.org
Keywords:	computing scientific
Licenses:	BSD-2-Clause
Provides:	petsc4py
Submitter:	heitzmann
Maintainer:	MartinDiehl
Last Packager:	MartinDiehl
Votes:	20
Popularity:	0.92
First Submitted:	2018-02-24 11:36 (UTC)
Last Updated:	2025-02-05 08:49 (UTC)

Dependencies (29)

fftw-openmpi
gsl (gsl-git^AUR)
hdf5-openmpi
lapack (aocl-libflame-aocc^AUR, lapack-git^AUR, atlas-lapack^AUR, blas-aocl-gcc^AUR, blas-aocl-aocc^AUR, blas-mkl^AUR, aocl-libflame^AUR, openblas-lapack^AUR, blas-openblas)
libjpeg-turbo (mozjpeg-git^AUR, libjpeg-turbo-git^AUR, mozjpeg^AUR)
libyaml (libyaml-git^AUR)
netcdf-openmpi
openmpi (openmpi-git^AUR)
python-mpi4py (python-mpi4py-intel^AUR)
python-numpy (python-numpy-git^AUR, python-numpy1^AUR, python-numpy-mkl-bin^AUR, python-numpy-mkl-tbb^AUR, python-numpy-mkl^AUR)
suitesparse
superlu
zfp
zlib (zlib-ng-compat-git^AUR, zlib-git^AUR, zlib-ng-compat)
cmake (cmake-git^AUR, cmake3^AUR) (make)
cython (cython-git^AUR) (make)
gcc (gcc-git^AUR, gccrs-git^AUR, gcc11^AUR, gcc-snapshot^AUR) (make)
gcc-fortran (gcc-fortran-git^AUR, gcc11-fortran^AUR, gcc-fortran-snapshot^AUR) (make)
python-setuptools (make)
hypre^AUR (optional) – support for HYPRE
Show 9 more dependencies...

Required by (26)

Sources (2)

Pinned Comments

MartinDiehl commented on 2022-10-06 10:26 (UTC)

@jrohwer

When building PETSc (more specifically, petsc4py), one test (ex100 from ksp) will fail if a previous (major) version is installed. I could not figure out why this happens. The solution would be to build in a clean root (which is a little bit complicated due to dependency on other AUR packages) or simply uninstall the old version before.

Any help to solve this issue is welcomed.

Latest Comments

« First ‹ Previous 1 .. 3 4 5 6 7 8 9 10 11 Next › Last »

MartinDiehl commented on 2021-11-28 21:46 (UTC)

@a.kudelin

I've inherited the PKGBUILD and don't know the exact reasons for installation into /opt However, PETSc installation is a little bit special. It relies on PETSC_DIR (and optionally PETSC_ARCH). Installing it into /usr might have unwanted effects, for example the PETSC_DIR/PETSC_ARCH mechanism to handle multiple versions might not work anymore.

If you have a modified PKGBUILD to change the installation path and/or test_optdepends.sh to include http://viennacl.sourceforge.net/ I will give it a try.

a.kudelin commented on 2021-11-28 12:00 (UTC) (edited on 2021-11-28 12:15 (UTC) by a.kudelin)

Hello,
Is there a reason for the package to be installed in /opt instead of /usr?
Also I suggest to enable OpenCL.

carlosal1015 commented on 2021-09-23 21:15 (UTC)

Thanks @MartinDiehl, I'm glad we have python bindings and the scotch package will be good maintained soon. Both are the building blocks of many packages. Here is the log file for petsc 3.15.4-5, no problem installation.

MartinDiehl commented on 2021-09-23 09:02 (UTC)

@lahwaacz: thanks, it is fixed now.

lahwaacz commented on 2021-09-22 14:48 (UTC)

The version 3.15.4-3 does not build for me (in a clean chroot with aurutils):

=========================================
Now to install the libraries do:
sudo make PETSC_DIR=/build/petsc/src/petsc-3.15.4 PETSC_ARCH=arch-linux-c-opt install
=========================================
*** Using PETSC_DIR=/build/petsc/src/petsc-3.15.4 PETSC_ARCH=arch-linux-c-opt ***
*** Copying PETSc to DESTDIR location: /build/petsc/src/tmp/opt/petsc/linux-c-opt  ***
====================================
Copy to DESTDIR /build/petsc/src/tmp/opt/petsc/linux-c-opt is now complete.
Before use - please copy/install over to specified prefix: /opt/petsc/linux-c-opt
====================================
/usr/bin/make  --no-print-directory -f makefile PETSC_ARCH=arch-linux-c-opt PETSC_DIR=/build/petsc/src/petsc-3.15.4 mpi4py-install petsc4py-install libmesh-install mfem-install slepc-install hpddm-install amrex-install bamg-install
make[2]: Nothing to be done for 'mpi4py-install'.
*** Building petsc4py ***
Sorry, user builduser is not allowed to execute '/usr/bin/python setup.py build' as builduser on lahwaacz.
**************************ERROR*************************************
Error building petsc4py.
********************************************************************
make[2]: *** [/build/petsc/src/petsc-3.15.4/arch-linux-c-opt/lib/petsc/conf/petscrules:49: petsc4pybuild] Error 1
make[1]: *** [makefile:296: install] Error 2
make: *** [GNUmakefile:17: install] Error 2
==> ERROR: A failure occurred in build().
    Aborting...
==> ERROR: Build failed, check /var/lib/aurbuild/x86_64/lahwaacz/build

MartinDiehl commented on 2021-09-21 15:52 (UTC)

@carlosal1015: I missed some dependencies. Please let me know if the current version still does not work.

xantares commented on 2020-05-27 08:52 (UTC)

can you check the checksums ?

Validating source files with sha256sums...

petsc-lite-3.13.1.tar.gz ... Passed

test_optdepends.sh ... FAILED

MartinDiehl commented on 2020-04-04 10:27 (UTC)

@xantares: This is the first time that the extensive test suite (including popups) is exectuted. I'm not sure if that is the intended beavior, I guess not.

xantares commented on 2020-04-04 09:28 (UTC)

could "make test" be run with xvfb-run to avoid popups ?