Thanks all. I updated the dependencies as near as I can tell. Weirdly I didn't see any of these new ones documented in the release upstream or the multiple "requirements" files in the repo. Let me know if anything else is still missing.
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Package Details: python-nibabel 5.2.1-1
Package Actions
Git Clone URL: | https://aur.archlinux.org/python-nibabel.git (read-only, click to copy) |
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Package Base: | python-nibabel |
Description: | Python library for reading and writing of some common neuroimaging file formats |
Upstream URL: | http://nipy.org/nibabel |
Keywords: | imaging medical mri neuroimaging science |
Licenses: | MIT |
Submitter: | mpoloton |
Maintainer: | Roosted7 (liamtimms) |
Last Packager: | liamtimms |
Votes: | 5 |
Popularity: | 0.000000 |
First Submitted: | 2015-01-21 20:58 (UTC) |
Last Updated: | 2024-03-07 18:28 (UTC) |
Dependencies (14)
- python-numpy (python-numpy-flameAUR, python-numpy-gitAUR, python-numpy1AUR, python-numpy-mkl-binAUR, python-numpy-mklAUR, python-numpy-mkl-tbbAUR)
- python-packaging
- python-setuptools
- python-build (make)
- python-hatch-vcs (make)
- python-installer (python-installer-gitAUR) (make)
- python-pytest-httpserver (check)
- python-fuse (optional)
- python-h5py (python-h5py-gitAUR, python-h5py-openmpi) (optional) – for MINC2 support
- python-indexed-gzipAUR (optional) – for faster reading of NIFTI files
- python-memory-profilerAUR (optional)
- python-pillow (python-pillow-gitAUR) (optional) – for PNG conversion in DICOMFS
- python-pydicom (optional) – for DICOM support
- python-scipy (python-scipy-gitAUR, python-scipy-mklAUR, python-scipy-mkl-tbbAUR, python-scipy-mkl-binAUR) (optional) – for full SPM-ANALYZE support
Required by (14)
Sources (1)
liamtimms commented on 2023-01-24 15:40 (UTC)
j0ni commented on 2023-01-24 15:27 (UTC)
Also python-installer
was missing on my system.
keiichiiownsu12 commented on 2023-01-23 22:51 (UTC)
@liamtimms, all dependencies are currently installed, including setuptools-scm 7.1.0. I'll try building from a clean-chroot later in the week. Something might be wrong with my setup.
liamtimms commented on 2023-01-23 22:04 (UTC) (edited on 2023-01-23 22:06 (UTC) by liamtimms)
@keiichiiownsu12, please look at the changes to the dependencies for this update.
edit: I'll add python-build
but the other two are included. What version of setuptools-scm is on your system? Arch is at 7.1.0 https://archlinux.org/packages/community/any/python-setuptools-scm/
keiichiiownsu12 commented on 2023-01-23 21:42 (UTC) (edited on 2023-01-23 21:42 (UTC) by keiichiiownsu12)
Update: installing python-build
did the trick. But now the following build error occurs:
==> Starting build()...
* Getting build dependencies for wheel...
ERROR Missing dependencies:
hatch-vcs
setuptools-scm>=6.4.0
==> ERROR: A failure occurred in build().
Aborting...
I confirmed both "missing dependencies" are installed.
keiichiiownsu12 commented on 2023-01-23 21:38 (UTC)
@liamtimms, apologies, I'm encountering an error at the build stage due to a missing build script:
==> Starting build()...
/usr/bin/python: No module named build
==> ERROR: A failure occurred in build().
Aborting...
liamtimms commented on 2023-01-23 19:48 (UTC) (edited on 2023-01-23 19:53 (UTC) by liamtimms)
@keiichiiownsu12 I updated the build system with this release already, are you hitting an error? https://aur.archlinux.org/cgit/aur.git/commit/?h=python-nibabel&id=c245400c24eb3f499279d9e6051d044d4bbd9351
keiichiiownsu12 commented on 2023-01-23 19:03 (UTC) (edited on 2023-01-23 19:03 (UTC) by keiichiiownsu12)
Just a heads up: it looks like the nibabel build system has changed. Current PKGBUILD fails due to lack of either setup.py or build.py files.
liamtimms commented on 2020-03-12 02:57 (UTC)
Hi @hottea I used a line from your PKGBUILD to fix an error from namcap
regarding the license, would you like me to put you as a contributor to this?
liamtimms commented on 2019-12-13 17:12 (UTC)
thanks @hottea, updated
Pinned Comments
liamtimms commented on 2023-02-10 19:35 (UTC)
If using an AUR helper and getting a failing checksum on the most recent update: Clear your cached copy of the source archive.