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Package Details: imod-bin 4.12.27-1
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Git Clone URL: | https://aur.archlinux.org/imod-bin.git (read-only, click to copy) |
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Package Base: | imod-bin |
Description: | Image-Processing, Modeling and Display Programs for Tomography and 3D Reconstruction |
Upstream URL: | https://bio3d.colorado.edu/imod/ |
Licenses: | GPL |
Provides: | 3dmod, 3dmodv, addtostack, adocxmlconv, alignframes, alignlog, alterheader, archiveorig, assemblevol, autofidseed, autopatchfit, avganova, avgstack, avgstatplot, b3dcatfiles, b3dcopy, b3dhostname, b3dremove, b3dtouch, b3dwinps, batchruntomo, beadtrack, binvol, blendmont, boxavg, boxstartend, calc, ccderaser, checkmtmod, checkxforms, chunksetup, clip, clipmodel, clonemodel, clonevolume, collectmmm, colornewst, combinefft, contourmod, convertmod, copyheader, copytomocoms, corrsearch3d, cryoposition, ctfphaseflip, ctfplotter, densmatch, densnorm, dm2mrc, dm3props, dualvolmatch, echo2, edgeeraser, edgemtf, edgepatches, edmont, edpiecepoint, endmodel, enhance, eraser, etomo, etomo.jar, etomoPluginDemo, excise, excludeviews, expandargs, extposition, extractmagrad, extractpieces, extracttilts, extstack, fenestra, fftrans, fiberpitch, filltomo, filterplot, findbeads3d, findcontrast, finddistort, findgradient, findhotpixels, findsection, findsirtdiffs, findwarp, finishjoin, fitpatches, fixboundaries, fixmont, flattenwarp, framewatcher, genhstplt, goodframe, gpumonitor, gputilttest, header, howflared, idfprocess, imavgstat, imod, imod-dist, imod2meta, imod2obj, imod2patch, imod2rib, imod2vrml, imod2vrml2, imodauto, imodchopconts, imodcpuload, imodcurvature, imodexplode, imodextract, imodfillin, imodfindbeads, imodhelp, imodinfo, imodjoin, imodkillgroup, imodmesh, imodmop, imodpsview, imodqtassist, imodsendevent, imodsetvalues, imodsortsurf, imodtrans, imoduntar, imodv, joinmodel, joinwarp2model, makecomfile, makegradtable, makejoincom, makepyramid, MarkersCorrespond, matchorwarp, matchrotpairs, matchshifts, matchvol, maxjoinsize, midas, model2point, montagesize, mrc2tif, mrcbyte, mrctaper, mrcx, mtdetect, mtffilter, mtk, mtlengths, mtmodel, mtoverlap, mtpairing, mtrotlong, mtsmooth, mtteach, nad_eed_3d, nda, newstack, numericdiff, onegenplot, onepatchcorr, patch2imod, patchcorr3d, patchcrawl3d, pickbestseed, point2model, preNAD, preNID, processchunks, prochunks.csh, queuechunk, RAPTOR, raw2mrc, rawtiltcoords, realscalemod, rec2imod, recombine, reducecont, reducemont, reducemtmod, refinematch, remapmodel, repackseed, resamplemod, restrictalign, rotatevol, rotmont, runimodqtapp, runraptor, sampletilt, scalemodel, sda, selfalign, setlibpath, settmpdir, setupcombine, setupcoms, setuplong, setupstitch, sirtsetup, slashfindspheres, slashmasksort, slurmCleanup.sh, slurmInit.sh, smoothsurf, solvematch, sortbeadsurfs, splitblend, splitcombine, splitcorrection, splitmrc, splittilt, squeezevol, startprocess, stitchalign, subimage, subimanova, subimstat, subm, submfg, subtomosetup, subtractcurves, sumdensity, taperoutvol, tapervoledge, tif2mrc, tilt, tiltalign, tiltxcorr, tomodataplots, tomopieces, tomopitch, tomosnapshot, tomostitch, transferfid, trimvol, vmstocsh, vmstopy, warpvol, wmod2imod, xcorrstack, xf2rotmagstr, xfalign, xfforfidless, xfinterstack, xfinverse, xfjointomo, xfmodel, xfproduct, xfsimplex, xftoxg, xyzproj |
Submitter: | vejnar |
Maintainer: | vejnar |
Last Packager: | vejnar |
Votes: | 1 |
Popularity: | 0.000438 |
First Submitted: | 2022-09-01 20:45 (UTC) |
Last Updated: | 2022-09-01 20:45 (UTC) |
Dependencies (5)
- libjpeg6-turbo
- python (python36, python32, python37, python39, python38, python310, python312)
- cuda (cuda-11.0, cuda11.1) (optional) – for library bindings
- java-runtime (java-gcj-compat, jre10, jdk12-openj9-bin, zulu-12-bin, jre6, jre12, server-jre, jdk13-openj9-bin, jdk9-openj9-bin, jdk10, jdk10-openj9-bin, jdk14-openj9-bin, jdk7, jre7, zulu-14-bin, amazon-corretto-15, zulu-embedded-jdk8, sapmachine-jdk-bin, amazon-corretto-16, jdk8-graalvm-bin, jdk16-graalvm-bin, jre8-openjdk-shenandoah, zulu-16-bin, jdk16-adoptopenjdk, jdk16-microsoft-openjdk, jdk11-msopenjdk-bin, jdk18-beta-temurin, jdk8-arm, jre17-jetbrains, liberica-jdk-11-bin, liberica-jdk-11-lite-bin, liberica-jre-11-bin, jre11-jetbrains-imfix, java-openjdk-loom-ea-bin, jdk7-j9-bin, jdk7r1-j9-bin, jdk8-j9-bin, jdk11-j9-bin, jre11-jbr-xdg, jre16-openjdk, jre13-openjdk, jre14-openjdk, jre-bcl, jdk-bcl, amazon-corretto-18, zulu-18-bin, zulu-13-bin, jre15, jre14, jre13, jre16, bishengjdk-17, bishengjre-17, jdk-arm, jdk11-openj9-bin, jdk-openj9-bin, jre-jbr-xdg, jre18-openjdk, jdk18-openj9-bin, jdk-android-studio, amazon-corretto-19-bin, zulu-19-bin, jdk19-graalvm-bin, liberica-jre-11-full-bin, jdk19-graalvm-ee-bin, jdk13-openjdk-bin, zulu-embedded-jdk, jre8-openjdk-xdg, jre17-openjdk-xdg, jre15-openjdk, zulu-embedded-jdk11, liberica-jre-8-full-bin, jdk11-graalvm-bin, jdk18-temurin, jre19-openjdk, jdk11-microsoft-openjdk, jre-openj9, jdk11-graalvm-ee-bin, jre-jetbrains, zulu-jre-fx-bin, jre17-jetbrains-imfix, jdk11-openjdk-dcevm, jre12-openjdk, jdk8-dragonwell-extended, jdk-jetbrains, jdk8-dragonwell-extended-bin, jdk8-dragonwell-standard-bin, jdk11-dragonwell-extended-bin, jdk11-dragonwell-standard-bin, jdk11-jetbrains-bin, jdk8-openj9-bin, jdk17-dragonwell-standard-bin, amazon-corretto-8, zulu-8-bin, zulu-20-bin, zulu-jdk-fx-bin, jdk-temurin, jdk17-graalvm-ee-bin, jdk20-graalvm-ee-bin, liberica-jdk-8-full-bin, jdk20-graalvm-bin, jdk17-graalvm-bin, mandrel-bin, jre-lts, jdk17-zulu-prime-bin, jdk8-graalvm-ee-bin, jdk8-aarch64, jdk8-temurin, jre17, jre8-adoptopenjdk, liberica-jdk-11-full-bin, liberica-jdk-17-full-bin, amazon-corretto-20-bin, amazon-corretto-17, zulu-15-bin, jdk8, jre8, jdk21-jetbrains-bin, jre21-jetbrains-imfix, amazon-corretto-11, jdk17-jetbrains-bin, jdk-microsoft-openjdk, jdk17-openj9-bin, jdk20-openj9-bin, java-openjdk-bin, zulu-21-bin, amazon-corretto-21-bin, jre11, liberica-jdk-full-bin, jre-openjdk-xdg, java-openjdk-ea-bin, jdk11-temurin, jdk17-temurin, jre, zulu-11-bin, zulu-17-bin, jre-openjdk, jre11-openjdk, jre17-openjdk, jre8-openjdk) (optional) – for Etomo
- tcsh (tcsh-git) (optional) – for only a few very specializied scripts
Required by (5)
- 4store (requires raptor)
- firefox-extension-leechblock (requires raptor) (make)
- lib32-raptor (requires raptor)
- polybar-themes-git (requires calc)
- redstore (requires raptor)