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Package Details: imod-bin 4.12.27-1
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Git Clone URL: | https://aur.archlinux.org/imod-bin.git (read-only, click to copy) |
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Package Base: | imod-bin |
Description: | Image-Processing, Modeling and Display Programs for Tomography and 3D Reconstruction |
Upstream URL: | https://bio3d.colorado.edu/imod/ |
Licenses: | GPL |
Provides: | 3dmod, 3dmodv, addtostack, adocxmlconv, alignframes, alignlog, alterheader, archiveorig, assemblevol, autofidseed, autopatchfit, avganova, avgstack, avgstatplot, b3dcatfiles, b3dcopy, b3dhostname, b3dremove, b3dtouch, b3dwinps, batchruntomo, beadtrack, binvol, blendmont, boxavg, boxstartend, calc, ccderaser, checkmtmod, checkxforms, chunksetup, clip, clipmodel, clonemodel, clonevolume, collectmmm, colornewst, combinefft, contourmod, convertmod, copyheader, copytomocoms, corrsearch3d, cryoposition, ctfphaseflip, ctfplotter, densmatch, densnorm, dm2mrc, dm3props, dualvolmatch, echo2, edgeeraser, edgemtf, edgepatches, edmont, edpiecepoint, endmodel, enhance, eraser, etomo, etomo.jar, etomoPluginDemo, excise, excludeviews, expandargs, extposition, extractmagrad, extractpieces, extracttilts, extstack, fenestra, fftrans, fiberpitch, filltomo, filterplot, findbeads3d, findcontrast, finddistort, findgradient, findhotpixels, findsection, findsirtdiffs, findwarp, finishjoin, fitpatches, fixboundaries, fixmont, flattenwarp, framewatcher, genhstplt, goodframe, gpumonitor, gputilttest, header, howflared, idfprocess, imavgstat, imod, imod-dist, imod2meta, imod2obj, imod2patch, imod2rib, imod2vrml, imod2vrml2, imodauto, imodchopconts, imodcpuload, imodcurvature, imodexplode, imodextract, imodfillin, imodfindbeads, imodhelp, imodinfo, imodjoin, imodkillgroup, imodmesh, imodmop, imodpsview, imodqtassist, imodsendevent, imodsetvalues, imodsortsurf, imodtrans, imoduntar, imodv, joinmodel, joinwarp2model, makecomfile, makegradtable, makejoincom, makepyramid, MarkersCorrespond, matchorwarp, matchrotpairs, matchshifts, matchvol, maxjoinsize, midas, model2point, montagesize, mrc2tif, mrcbyte, mrctaper, mrcx, mtdetect, mtffilter, mtk, mtlengths, mtmodel, mtoverlap, mtpairing, mtrotlong, mtsmooth, mtteach, nad_eed_3d, nda, newstack, numericdiff, onegenplot, onepatchcorr, patch2imod, patchcorr3d, patchcrawl3d, pickbestseed, point2model, preNAD, preNID, processchunks, prochunks.csh, queuechunk, RAPTOR, raw2mrc, rawtiltcoords, realscalemod, rec2imod, recombine, reducecont, reducemont, reducemtmod, refinematch, remapmodel, repackseed, resamplemod, restrictalign, rotatevol, rotmont, runimodqtapp, runraptor, sampletilt, scalemodel, sda, selfalign, setlibpath, settmpdir, setupcombine, setupcoms, setuplong, setupstitch, sirtsetup, slashfindspheres, slashmasksort, slurmCleanup.sh, slurmInit.sh, smoothsurf, solvematch, sortbeadsurfs, splitblend, splitcombine, splitcorrection, splitmrc, splittilt, squeezevol, startprocess, stitchalign, subimage, subimanova, subimstat, subm, submfg, subtomosetup, subtractcurves, sumdensity, taperoutvol, tapervoledge, tif2mrc, tilt, tiltalign, tiltxcorr, tomodataplots, tomopieces, tomopitch, tomosnapshot, tomostitch, transferfid, trimvol, vmstocsh, vmstopy, warpvol, wmod2imod, xcorrstack, xf2rotmagstr, xfalign, xfforfidless, xfinterstack, xfinverse, xfjointomo, xfmodel, xfproduct, xfsimplex, xftoxg, xyzproj |
Submitter: | vejnar |
Maintainer: | vejnar (MoritzWM) |
Last Packager: | vejnar |
Votes: | 1 |
Popularity: | 0.000000 |
First Submitted: | 2022-09-01 20:45 (UTC) |
Last Updated: | 2022-09-01 20:45 (UTC) |
Dependencies (5)
- libjpeg6-turbo
- python (python37AUR, python311AUR, python310AUR)
- cuda (cuda11.1AUR, cuda-12.2AUR, cuda12.0AUR, cuda11.4AUR, cuda11.4-versionedAUR, cuda12.0-versionedAUR) (optional) – for library bindings
- java-runtime (jre10AUR, jre12AUR, jdk10AUR, jdk10-openj9-binAUR, jdk7AUR, jre7AUR, amazon-corretto-16AUR, jdk8-graalvm-binAUR, jdk16-graalvm-binAUR, jdk16-adoptopenjdkAUR, liberica-jre-11-binAUR, jdk11-j9-binAUR, jre11-jbr-xdgAUR, jre16-openjdkAUR, jre14-openjdkAUR, jre15AUR, jre14AUR, jre13AUR, jre16AUR, jre18-openjdkAUR, amazon-corretto-19-binAUR, jdk19-graalvm-binAUR, liberica-jre-11-full-binAUR, jdk19-graalvm-ee-binAUR, jdk13-openjdk-binAUR, liberica-jre-8-full-binAUR, jdk11-graalvm-binAUR, jre-openj9AUR, jdk11-graalvm-ee-binAUR, jre12-openjdkAUR, jdk11-dragonwell-standard-binAUR, jdk11-jetbrains-binAUR, jdk20-graalvm-binAUR, jdk17-graalvm-binAUR, jdk20-openj9-binAUR, zulu-13-binAUR, jdk8-dragonwell-extended-binAUR, jdk8-dragonwell-standard-binAUR, jdk11-dragonwell-extended-binAUR, jdk17-dragonwell-standard-binAUR, jdk8-j9-binAUR, jdk7-j9-binAUR, jdk7r1-j9-binAUR, jre13-openjdkAUR, jre15-openjdkAUR, jdk21-graalvm-binAUR, jre17-jetbrainsAUR, jdk8-openj9-binAUR, jre-ltsAUR, microsoft-openjdk-11-binAUR, microsoft-openjdk-17-binAUR, microsoft-openjdk-21-binAUR, liberica-nik-24-full-binAUR, jre21-jetbrains-gitAUR, jdk21-jetbrains-gitAUR, zulu-17-binAUR, zulu-8-binAUR, mandrel-binAUR, mandrel24-binAUR, liberica-jdk-17-full-binAUR, liberica-jdk-11-lite-binAUR, liberica-jdk-11-full-binAUR, liberica-jdk-11-binAUR, jdk17-graalvm-ee-binAUR, jdk21-graalvm-ee-binAUR, jdk22-graalvm-ee-binAUR, jdk20-graalvm-ee-binAUR, jdk22-graalvm-binAUR, jre19-openjdkAUR, jdk17-jetbrains-binAUR, zulu-jdk-fx-binAUR, jre21-jetbrainsAUR, jdk17-zulu-prime-binAUR, jre17AUR, amazon-corretto-17AUR, amazon-corretto-21-binAUR, jdk21-temurinAUR, amazon-corretto-8AUR, amazon-corretto-11AUR, jdk11-temurinAUR, liberica-jdk-full-binAUR, liberica-jdk-21-full-binAUR, liberica-jdk-8-full-binAUR, jdk17-temurinAUR, jdk8-temurinAUR, zulu-21-binAUR, jdk-temurinAUR, jre8AUR, jdk8AUR, jdk8-perfAUR, zulu-jre-fx-binAUR, zulu-fx-binAUR, zulu8-fx-binAUR, zulu11-fx-binAUR, zulu17-fx-binAUR, zulu21-fx-binAUR, jdk11-openj9-binAUR, jre-jetbrainsAUR, jre-openjdk-wakefieldAUR, jdk-openjdk-wakefieldAUR, jdk21-openj9-binAUR, jreAUR, jdkAUR, jre-zulu-binAUR, jre-zulu-fx-binAUR, jdk21-dragonwell-standard-binAUR, jdk21-dragonwell-extended-binAUR, jdk-android-studioAUR, jdk17-openj9-binAUR, jre-zuluAUR, jre-zulu-fxAUR, jre21-zulu-binAUR, jre17-zulu-binAUR, jdk23-graalvm-ee-binAUR, zing-8-binAUR, zing-21-binAUR, jre11AUR, openjdk-zulu-ca-fx-binAUR, openjdk-zulu8-ca-fx-binAUR, openjdk-zulu11-ca-fx-binAUR, openjdk-zulu17-ca-fx-binAUR, openjdk-zulu21-ca-fx-binAUR, jdk-openj9-binAUR, zulu-11-binAUR, jdk8-graalvm-ee-binAUR, jdk8-dragonwell-extendedAUR, java-openjdk-ea-binAUR, java-openjdk-binAUR, zulu-17-fx-binAUR, zulu-23-binAUR, jdk21-jetbrains-binAUR, jdk-openjdk, jdk11-openjdk, jdk17-openjdk, jdk21-openjdk, jre-openjdk, jre11-openjdk, jre17-openjdk, jre21-openjdk, jre8-openjdk) (optional) – for Etomo
- tcsh (tcsh-gitAUR) (optional) – for only a few very specializied scripts
Required by (5)
- 4store (requires raptor)
- firefox-extension-leechblock (requires raptor) (make)
- lib32-raptor (requires raptor)
- polybar-themes-git (requires calc)
- redstore (requires raptor)
Latest Comments
vejnar commented on 2024-12-18 01:56 (UTC) (edited on 2024-12-18 01:57 (UTC) by vejnar)
You're now co-maintainer @MoritzWM. Feel free to update.
MoritzWM commented on 2024-12-13 09:29 (UTC)
Hello, are you still maintaining this package? I would otherwise gladly take over, since there is now imod 5 and I'm a quite active user. Also, technically this package should be called imod-beta-bin, no? Because the last stable version is 4.11.25