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Package Details: fastqc 0.12.1-4
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Git Clone URL: | https://aur.archlinux.org/fastqc.git (read-only, click to copy) |
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Package Base: | fastqc |
Description: | A quality control tool for high throughput sequence data. |
Upstream URL: | https://www.bioinformatics.babraham.ac.uk/projects/fastqc |
Licenses: | GPL3 |
Submitter: | thurisaz |
Maintainer: | malacology (BioArchLinuxBot) |
Last Packager: | BioArchLinuxBot |
Votes: | 5 |
Popularity: | 0.000034 |
First Submitted: | 2015-11-20 15:27 (UTC) |
Last Updated: | 2023-06-23 18:01 (UTC) |
Dependencies (5)
- java-runtime (jre10AUR, jre12AUR, server-jreAUR, jdk10AUR, jdk10-openj9-binAUR, jdk7AUR, jre7AUR, amazon-corretto-16AUR, jdk8-graalvm-binAUR, jdk16-graalvm-binAUR, jdk16-adoptopenjdkAUR, jdk16-microsoft-openjdkAUR, jdk8-armAUR, liberica-jre-11-binAUR, jdk11-j9-binAUR, jre11-jbr-xdgAUR, jre16-openjdkAUR, jre14-openjdkAUR, amazon-corretto-18AUR, jre15AUR, jre14AUR, jre13AUR, jre16AUR, jre18-openjdkAUR, jdk-android-studioAUR, amazon-corretto-19-binAUR, jdk19-graalvm-binAUR, liberica-jre-11-full-binAUR, jdk19-graalvm-ee-binAUR, jdk13-openjdk-binAUR, liberica-jre-8-full-binAUR, jdk11-graalvm-binAUR, jre19-openjdkAUR, jre-openj9AUR, jdk11-graalvm-ee-binAUR, jdk11-openjdk-dcevmAUR, jre12-openjdkAUR, jdk11-dragonwell-standard-binAUR, jdk11-jetbrains-binAUR, jdk20-graalvm-binAUR, jdk17-graalvm-binAUR, jdk8-graalvm-ee-binAUR, amazon-corretto-20-binAUR, zulu-15-binAUR, jdk20-openj9-binAUR, zulu-13-binAUR, jdk8-dragonwell-extended-binAUR, jdk8-dragonwell-standard-binAUR, jdk11-dragonwell-extended-binAUR, jdk17-dragonwell-standard-binAUR, jdk20-graalvm-ee-binAUR, jre11AUR, jdk8-j9-binAUR, jdk7-j9-binAUR, jdk7r1-j9-binAUR, jdk8-dragonwell-extendedAUR, jre13-openjdkAUR, jre15-openjdkAUR, jdk21-graalvm-binAUR, liberica-jdk-17-full-binAUR, liberica-jdk-11-binAUR, liberica-jdk-11-full-binAUR, liberica-jdk-11-lite-binAUR, mandrel-binAUR, jdk17-openj9-binAUR, jdk8AUR, jre8AUR, jdk17-zulu-prime-binAUR, jdk-openj9-binAUR, jdk11-openj9-binAUR, jre17-jetbrainsAUR, jre-jetbrainsAUR, jdk17-jetbrains-binAUR, jre21-jetbrainsAUR, jdk21-jetbrains-binAUR, jre21-jetbrains-gitAUR, jre-openjdk-wakefieldAUR, jdk-openjdk-wakefieldAUR, jdk8-perfAUR, zulu-jdk-fx-binAUR, jdk8-openj9-binAUR, zulu-jre-fx-binAUR, jdk-temurinAUR, amazon-corretto-22-binAUR, jdk22-graalvm-binAUR, zing-8-binAUR, zing-21-binAUR, amazon-corretto-17AUR, amazon-corretto-21-binAUR, java-openjdk-binAUR, liberica-jdk-full-binAUR, liberica-jdk-21-full-binAUR, liberica-jdk-8-full-binAUR, zulu-21-binAUR, zulu-8-binAUR, zulu-11-binAUR, zulu-17-binAUR, jdk21-temurinAUR, jdk17-temurinAUR, jdk11-temurinAUR, amazon-corretto-8AUR, amazon-corretto-11AUR, jdk8-temurinAUR, jreAUR, jdkAUR, jre-ltsAUR, jre17AUR, microsoft-openjdk-11-binAUR, microsoft-openjdk-17-binAUR, microsoft-openjdk-21-binAUR, java-openjdk-ea-binAUR, jdk17-graalvm-ee-binAUR, jdk21-graalvm-ee-binAUR, jdk22-graalvm-ee-binAUR, jdk-openjdk, jdk11-openjdk, jdk17-openjdk, jdk21-openjdk, jre-openjdk, jre11-openjdk, jre17-openjdk, jre21-openjdk, jre8-openjdk)
- perl (perl-gitAUR)
- ttf-dejavu (ttf-dejavu-ibAUR, ttf-dejavu-emojilessAUR)
- ant (ant-gitAUR) (make)
- java-environment (jdk12AUR, jdk10AUR, jdk10-openj9-binAUR, jdk7AUR, amazon-corretto-16AUR, jdk8-graalvm-binAUR, jdk16-graalvm-binAUR, jdk16-adoptopenjdkAUR, jdk16-microsoft-openjdkAUR, jdk8-armAUR, liberica-jre-11-binAUR, jdk11-j9-binAUR, jdk11-jbr-xdgAUR, jdk16-openjdkAUR, jdk14-openjdkAUR, amazon-corretto-18AUR, jdk18-openjdkAUR, jdk-android-studioAUR, amazon-corretto-19-binAUR, jdk19-graalvm-binAUR, liberica-jre-11-full-binAUR, jdk19-graalvm-ee-binAUR, jdk13-openjdk-binAUR, liberica-jre-8-full-binAUR, jdk11-graalvm-binAUR, jdk19-openjdkAUR, jdk-openj9AUR, jdk11-graalvm-ee-binAUR, jdk11-openjdk-dcevmAUR, jdk12-openjdkAUR, jdk11-dragonwell-standard-binAUR, jdk11-jetbrains-binAUR, jdk20-graalvm-binAUR, jdk17-graalvm-binAUR, jdk8-graalvm-ee-binAUR, amazon-corretto-20-binAUR, zulu-15-binAUR, jdk20-openj9-binAUR, zulu-13-binAUR, jdk8-dragonwell-extended-binAUR, jdk8-dragonwell-standard-binAUR, jdk11-dragonwell-extended-binAUR, jdk17-dragonwell-standard-binAUR, jdk20-graalvm-ee-binAUR, jdk11AUR, jdk8-j9-binAUR, jdk7-j9-binAUR, jdk7r1-j9-binAUR, jdk8-dragonwell-extendedAUR, jdk13-openjdkAUR, jdk15-openjdkAUR, jdk21-graalvm-binAUR, liberica-jdk-17-full-binAUR, liberica-jdk-11-binAUR, liberica-jdk-11-full-binAUR, liberica-jdk-11-lite-binAUR, mandrel-binAUR, jdk17-openj9-binAUR, jdk8AUR, jdk17-zulu-prime-binAUR, jdk-openj9-binAUR, jdk11-openj9-binAUR, jdk17-jetbrainsAUR, jre-jetbrainsAUR, jabba-binAUR, jdk17-jetbrains-binAUR, jdk21-jetbrainsAUR, jdk21-jetbrains-binAUR, jdk21-jetbrains-gitAUR, jdk-openjdk-wakefieldAUR, jdk8-perfAUR, zulu-jdk-fx-binAUR, jdk8-openj9-binAUR, jdk-temurinAUR, amazon-corretto-22-binAUR, jdk22-graalvm-binAUR, zing-8-binAUR, zing-21-binAUR, amazon-corretto-17AUR, amazon-corretto-21-binAUR, java-openjdk-binAUR, liberica-jdk-full-binAUR, liberica-jdk-21-full-binAUR, liberica-jdk-8-full-binAUR, zulu-21-binAUR, zulu-8-binAUR, zulu-11-binAUR, zulu-17-binAUR, jdk21-temurinAUR, jdk17-temurinAUR, jdk11-temurinAUR, amazon-corretto-8AUR, amazon-corretto-11AUR, jdk8-temurinAUR, jdkAUR, jdk-ltsAUR, microsoft-openjdk-11-binAUR, microsoft-openjdk-17-binAUR, microsoft-openjdk-21-binAUR, java-openjdk-ea-binAUR, jdk17-graalvm-ee-binAUR, jdk21-graalvm-ee-binAUR, jdk22-graalvm-ee-binAUR, jdk-openjdk, jdk11-openjdk, jdk17-openjdk, jdk21-openjdk, jdk8-openjdk) (make)
Latest Comments
mehrad commented on 2023-04-26 08:14 (UTC)
At the moment it fails to build due to java version number issue. Reported some detailed info here: https://github.com/BioArchLinux/Packages/issues/130
thurisaz commented on 2022-12-02 16:02 (UTC)
I'm not using fastqc anymore and haven't been updating the package. If someone else wants to adopt it and follow up on malacology's suggestion, I'd be happy to hand the package over.
malacology commented on 2022-12-01 16:28 (UTC)
see here. Better to compile from source and place it under /usr/share/ https://github.com/BioArchLinux/Packages/blob/master/BioArchLinux/fastqc/PKGBUILD
jrdemasi commented on 2017-05-24 05:36 (UTC)
thurisaz commented on 2017-05-24 04:48 (UTC)
jrdemasi commented on 2017-05-23 20:02 (UTC)