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Package Details: r-cager 2.10.0-1
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| Git Clone URL: | https://aur.archlinux.org/r-cager.git (read-only, click to copy) |
|---|---|
| Package Base: | r-cager |
| Description: | Analysis of CAGE (Cap Analysis of Gene Expression) sequencing data for precise mapping of transcription start sites and promoterome mining |
| Upstream URL: | https://bioconductor.org/packages/CAGEr |
| Licenses: | GPL |
| Submitter: | BioArchLinuxBot |
| Maintainer: | BioArchLinuxBot |
| Last Packager: | BioArchLinuxBot |
| Votes: | 0 |
| Popularity: | 0.000000 |
| First Submitted: | 2022-06-05 21:39 (UTC) |
| Last Updated: | 2024-05-03 06:36 (UTC) |
Dependencies (34)
- r (r352AUR, r-mklAUR)
- r-biocgenericsAUR
- r-biocparallelAUR
- r-bsgenomeAUR
- r-cagefightrAUR
- r-data.tableAUR
- r-delayedarrayAUR
- r-delayedmatrixstatsAUR
- r-formula.toolsAUR
- r-genomeinfodbAUR
- r-genomicalignmentsAUR
- r-genomicrangesAUR
- r-ggplot2AUR
- r-gtoolsAUR
- r-irangesAUR
- r-memoiseAUR
- r-multiassayexperimentAUR
- r-plyrAUR
- r-reshape2AUR
- r-rsamtoolsAUR
- r-rtracklayerAUR
- r-s4vectorsAUR
- r-somAUR
- r-stringdistAUR
- r-stringiAUR
- r-summarizedexperimentAUR
- r-veganAUR
- r-vgamAUR
- r-biocstyleAUR (optional)
- r-bsgenome.drerio.ucsc.danrer7AUR (optional)
- r-deseq2AUR (optional)
- r-fantom3and4cage (optional)
- r-knitrAUR (optional)
- r-rmarkdownAUR (optional)
Required by (2)
- r-seqarchrplus (optional)
- r-seqpattern (optional)