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Package Details: r-mkl 4.4.1-1

Package Actions

Git Clone URL:	https://aur.archlinux.org/r-mkl.git (read-only, click to copy)
Package Base:	r-mkl
Description:	Language and environment for statistical computing and graphics, linked to the Intel(R) MKL.
Upstream URL:	http://www.r-project.org/
Keywords:	hpc mathematics modelling r statistics
Licenses:	GPL
Conflicts:	microsoft-r-open, r
Provides:	r
Submitter:	giniu
Maintainer:	alexanderp
Last Packager:	alexanderp
Votes:	25
Popularity:	0.000295
First Submitted:	2010-05-06 00:10 (UTC)
Last Updated:	2024-07-04 19:34 (UTC)

Dependencies (28)

bzip2 (bzip2-git^AUR)
curl (curl-quiche-git^AUR, curl-http3-ngtcp2^AUR, curl-git^AUR, curl-c-ares^AUR)
icu (icu-git^AUR)
intel-oneapi-mkl (intel-oneapi-hpckit^AUR, intel-oneapi-basekit)
libjpeg (mozjpeg-git^AUR, libjpeg-turbo-git^AUR, mozjpeg^AUR, libjpeg-turbo)
libpng (libpng-apng^AUR, libpng-git^AUR)
libtiff (libtiff-git^AUR, libtiff-lerc^AUR)
libxmu
libxt
ncurses (ncurses-git^AUR)
openmp
pango (pango-git^AUR)
pcre2 (pcre2-git^AUR)
perl (perl-git^AUR)
readline (readline-git^AUR)
unzip (unzip-natspec^AUR, unzip-zstd^AUR)
which (busybox-coreutils^AUR)
xz (xz-git^AUR)
zip (zip-natspec^AUR)
zlib (zlib-ng-compat-git^AUR, zlib-git^AUR, zlib-ng-compat^AUR)
gcc-fortran (gcc-fortran-git^AUR, gcc11-fortran^AUR, gcc-fortran-snapshot^AUR) (make)
jdk-openjdk (jdk16-adoptopenjdk^AUR, jdk-temurin^AUR, jdk21-temurin^AUR, jdk17-temurin^AUR, jdk11-temurin^AUR, zing-21-bin^AUR) (make)
texlive-fontsrecommended (texlive-installer^AUR, texlive-full^AUR) (make)
texlive-latexrecommended (texlive-installer^AUR, texlive-full^AUR) (make)
tk (tk-fossil^AUR) (make)
gcc-fortran (gcc-fortran-git^AUR, gcc11-fortran^AUR, gcc-fortran-snapshot^AUR) (optional) – needed to compile some CRAN packages
texlive-latex (texlive-installer^AUR, texlive-full^AUR) (optional) – LaTeX sty files
tk (tk-fossil^AUR) (optional) – tcl-tk interface

Required by (3401)

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zim-git (requires r) (optional)

Sources (5)

Latest Comments

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jbmorgado commented on 2018-02-10 11:29 (UTC) (edited on 2018-02-10 11:29 (UTC) by jbmorgado)

Can't compile this.

Gets stuck for hours during compilation at: "Running ‘Simple.R’"

mys_721tx commented on 2017-11-16 17:29 (UTC)

icc 18.0.1 is out, it should fix the gcc 7.0 compatibility issue https://software.intel.com/en-us/forums/intel-c-compiler/topic/742701

alexanderp commented on 2017-04-24 18:40 (UTC)

Yes, compilation was fixed with my last update on 2017-03-06.

gergi commented on 2017-04-24 07:29 (UTC)

Compiles again smoothly. zlib issue got fixed in https://stat.ethz.ch/pipermail/r-help//2017-January/444162.html

alexanderp commented on 2017-02-16 17:07 (UTC)

That's a general problem with zlib. Even vanilla R from the repositories doesn't compile.

adalardo commented on 2017-02-14 11:43 (UTC)

Same here checking if zlib version >= 1.2.5... no checking whether zlib support suffices... configure: error: zlib library and headers are required The zlib version installed is 1:1.2.11. I believe the problem is "1:" before official version name.

gergi commented on 2017-02-07 15:11 (UTC)

Build fails on checking if zlib version >= 1.2.5... no checking whether zlib support suffices... configure: error: zlib library and headers are required

herraiz commented on 2016-11-20 22:42 (UTC)

Excellent, thanks @alexanderp!

alexanderp commented on 2016-11-20 21:01 (UTC)

Herraiz, thank you for the insight in compiling quantreg and igraph. I've implemented your suggestion in the ./configure line instead of Makeconf. It seems that -lifcore and -lifport needed to be included before and after -lm.

herraiz commented on 2016-11-20 17:41 (UTC)

Here is the same patch against the current master: From 79b350c7f58018b28374201fc3d644b3bd2696ce Mon Sep 17 00:00:00 2001 From: "Israel Herraiz <isra@herraiz.org>" Date: Sun, 20 Nov 2016 18:39:02 +0100 Subject: [PATCH] Patch for Makeconf.in --- PKGBUILD | 14 ++++++++++---- makeconf.in.patch | 11 +++++++++++ 2 files changed, 21 insertions(+), 4 deletions(-) create mode 100644 makeconf.in.patch diff --git a/PKGBUILD b/PKGBUILD index 348fa61..3a19729 100644 --- a/PKGBUILD +++ b/PKGBUILD @@ -48,16 +48,20 @@ install=r-mkl.install source=("http://cran.r-project.org/src/base/R-${pkgver%%.*}/R-${pkgver}.tar.gz" 'r.desktop' 'r.png' - 'R.conf') - + 'R.conf' + 'makeconf.in.patch' + ) md5sums=('2437014ef40641cdc9673e89c040b7a8' '44ca875140b148543148b7749c7d6f5e' '8e0c51650b8a63f110fa7b09e699e9c4' - '1dfa62c812aed9642f6e4ac34999b9fe') + '1dfa62c812aed9642f6e4ac34999b9fe' + 'd7cf18f67e7e76cc81fed1a2a3e654de') sha512sums=('06a98687c0b180cb0bfd57440ea26088212d9f48948d503136475bf54b42d72cfec5bea7e333c0cedd60733bd614dd0f8c2eced7e24478b6c89f48e8d0c43482' '1a90aed5411d72dd3e7708db0cb92c518e656e1a510ece02ad934131e05b8e683b4a36da8d37198263dc19fb2f3f19656c19c01f9b67974f0d7755974076d0b7' '1491b01d3d14b86d26c383e00e2305858a52ddd498158c9f7f6b33026ee01f246408b1676cffea73f7783c8c4cf546285705c43c0286adbd75ad77706918b5fe' - 'aae388c5b6c02d9fb857914032b0cd7d68a9f21e30c39ba11f5a29aaf1d742545482054b57ce18872eabb6605bbb359b2fc1e9be5ce6881443fdbdf6b67fab3b') + 'aae388c5b6c02d9fb857914032b0cd7d68a9f21e30c39ba11f5a29aaf1d742545482054b57ce18872eabb6605bbb359b2fc1e9be5ce6881443fdbdf6b67fab3b' + 'e04288ec8bed02dc4f5e4441285dba499390c78e5a4df8a82718b2905eed3c3a75828bebe4f5fddd1fab5831f0fc764df062f8f8bd971cb2e90352ea240218ac') + # Build with GCC/GFortran or the Intel Compiler Suite _CC="icc" # comment to build with GCC @@ -70,6 +74,8 @@ prepare() { sed -i 's|test ${makeinfo_version_min} -lt 7|test ${makeinfo_version_min} -lt 0|' configure # Fix the config script to look in Makeconf for LDFLAGS sed -i '/LIBS=`eval $query VAR=LIBS`/a\LDFLAGS=`eval $query VAR=LDFLAGS`' src/scripts/config + + patch -p2 < ../makeconf.in.patch } build() { diff --git a/makeconf.in.patch b/makeconf.in.patch new file mode 100644 index 0000000..98d09b5 --- /dev/null +++ b/makeconf.in.patch @@ -0,0 +1,11 @@ +--- src/R-3.3.2/etc/Makeconf.in 2016-03-17 00:04:44.000000000 +0100 ++++ src/R-3.3.2/etc/Makeconf.in.new 2016-11-20 18:35:47.681107000 +0100 +@@ -10,7 +10,7 @@ + include $(R_SHARE_DIR)/make/vars.mk + + AR = @AR@ +-BLAS_LIBS = @BLAS_LIBS@ ++BLAS_LIBS = @BLAS_LIBS@ -lifcore -lifport + C_VISIBILITY = @C_VISIBILITY@ + CC = @CC@ + CFLAGS = @CFLAGS@ $(LTO) -- 2.10.2